Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCCTTCCCATTCCGTCCCTTTCTATTTTCATATTCCATTGCTTCTACTTCCTCTTCTTCCTCTAACACCACCATCACACTCCCCCTCACCGCCTTCTCTTCTCTCGAGTTCCAGATCCATGGAAATGGTCCAAGAACCGAAACAAATCAAGCGCATTCGCCGAGAAATTTGCTCACGTGTAGCTATGGCGCTTACTCAGTTTTTCTCAGCTTCGGAAGTAGTCTCGTCTGGTTCCCCTGCACCGCCCATTTTCTCTGCTTCAGGTGTTCGTTTCCGAACGCGTGGCTATTGCGACGATTACGAAATTTATCCCCAAATTATCTTCTGCTGCGAAGATTATCGGTTACGGAAAGTGGAAATGTGCTTGGATTTTTGGCCCTAATGTGAAATTTAGATGTTGGAAT
mRNA sequence
AATTCCTTCCCATTCCGTCCCTTTCTATTTTCATATTCCATTGCTTCTACTTCCTCTTCTTCCTCTAACACCACCATCACACTCCCCCTCACCGCCTTCTCTTCTCTCGAGTTCCAGATCCATGGAAATGGTCCAAGAACCGAAACAAATCAAGCGCATTCGCCGAGAAATTTGCTCACGTGTAGCTATGGCGCTTACTCAGTTTTTCTCAGCTTCGGAAGTAGTCTCGTCTGGTTCCCCTGCACCGCCCATTTTCTCTGCTTCAGGTGTTCGTTTCCGGTGGCTATTGCGACGATTACGAAATTTATCCCCAAATTATCTTCTGCTGCGAAGATTATCGGTTACGGAAAGTGGAAATGTGCTTGGATTTTTGGCCCTAATGTGAAATTTAGATGTTGGAAT
Coding sequence (CDS)
AATTCCTTCCCATTCCGTCCCTTTCTATTTTCATATTCCATTGCTTCTACTTCCTCTTCTTCCTCTAACACCACCATCACACTCCCCCTCACCGCCTTCTCTTCTCTCGAGTTCCAGATCCATGGAAATGGTCCAAGAACCGAAACAAATCAAGCGCATTCGCCGAGAAATTTGCTCACGTGTAGCTATGGCGCTTACTCAGTTTTTCTCAGCTTCGGAAGTAGTCTCGTCTGGTTCCCCTGCACCGCCCATTTTCTCTGCTTCAGGTGTTCGTTTCCGGTGGCTATTGCGACGATTACGAAATTTATCCCCAAATTATCTTCTGCTGCGAAGATTATCGGTTACGGAAAGTGGAAATGTGCTTGGATTTTTGGCCCTAATGTGAAATTTAGATGTTGGAAT
Protein sequence
NSFPFRPFLFSYSIASTSSSSSNTTITLPLTAFSSLEFQIHGNGPRTETNQAHSPRNLLTCSYGAYSVFLSFGSSLVWFPCTAHFLCFRCSFPVAIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRCWN
Homology
BLAST of MS017632 vs. NCBI nr
Match:
XP_022925946.1 (probable aspartyl protease At4g16563 [Cucurbita moschata] >KAG6604319.1 Aspartic proteinase nepenthesin-1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 119.0 bits (297), Expect = 3.1e-23
Identity = 78/158 (49.37%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 7 PFLFS-YSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRTE 66
PFL S + S SSSSS+TT+TLPLT F SL F H PRT+
Sbjct: 7 PFLLSIVLLLSASSSSSSTTVTLPLTVFPSLPFAHPWKNIKHLVSASLTRAQHLKTPRTK 66
Query: 67 TNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP-V 126
+N + L SYGAYS+ L+F GSSLVWFPCTA + C CSFP V
Sbjct: 67 SNTSIQNVALFPRSYGAYSISLAFGTPPQSLSLVFDTGSSLVWFPCTAGYRCSNCSFPNV 126
Query: 127 AIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRC 133
ATI KFIPKLSS+AKIIG KC+WIFGPN+K C
Sbjct: 127 DAATIPKFIPKLSSSAKIIGCRNRKCSWIFGPNLKTLC 164
BLAST of MS017632 vs. NCBI nr
Match:
KAG7034471.1 (Aspartic proteinase nepenthesin-1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 118.2 bits (295), Expect = 5.3e-23
Identity = 78/158 (49.37%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 7 PFLFS-YSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRTE 66
PFL S + S SSSSS+TT+TLPLT F SL F H PRT+
Sbjct: 7 PFLLSIVLLLSASSSSSSTTVTLPLTVFPSLPFAHPWKNIKHLVSASLTRAQHLKIPRTK 66
Query: 67 TNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP-V 126
+N + L SYGAYS+ L+F GSSLVWFPCTA + C CSFP V
Sbjct: 67 SNTSIQNVALFPRSYGAYSISLAFGTPPQSLSLVFDTGSSLVWFPCTAGYRCSNCSFPNV 126
Query: 127 AIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRC 133
ATI KFIPKLSS+AKIIG KC+WIFGPN+K C
Sbjct: 127 DAATIPKFIPKLSSSAKIIGCRNRKCSWIFGPNLKTLC 164
BLAST of MS017632 vs. NCBI nr
Match:
XP_038881211.1 (probable aspartyl protease At4g16563 [Benincasa hispida])
HSP 1 Score: 117.5 bits (293), Expect = 9.0e-23
Identity = 82/165 (49.70%), Postives = 96/165 (58.18%), Query Frame = 0
Query: 3 FPFRPFLFS-YSIASTSSSSSNTTITLPLTAF------------------SSLEFQIHGN 62
FP PFLFS + + TSSSSS +TITLPLTAF +SL H
Sbjct: 4 FPI-PFLFSIFLLLPTSSSSSISTITLPLTAFPSIPLTDDPLKIINYLLSASLNRAQHLK 63
Query: 63 GPRTETNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRC 122
P+T++ Q S L + SYGAYS+ L+F GSSLVWFPCTA + C C
Sbjct: 64 NPQTKSIQNVS---LFSRSYGAYSITLAFGTPPQNLSFVFDTGSSLVWFPCTAGYRCSNC 123
Query: 123 SFP-VAIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRCWN 135
SFP V ATI KF+PKLSS+AKIIG KCAWIFGPN+ RC N
Sbjct: 124 SFPNVDAATIPKFVPKLSSSAKIIGCRNPKCAWIFGPNLNSRCRN 164
BLAST of MS017632 vs. NCBI nr
Match:
XP_011657732.1 (probable aspartyl protease At4g16563 [Cucumis sativus] >KGN48299.1 hypothetical protein Csa_004059 [Cucumis sativus])
HSP 1 Score: 117.1 bits (292), Expect = 1.2e-22
Identity = 74/159 (46.54%), Postives = 93/159 (58.49%), Query Frame = 0
Query: 7 PFLFSYSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRTET 66
PFLFS + +SSSS+TT+ LPLT F S+ F H P++++
Sbjct: 7 PFLFSIFLLLPTSSSSSTTV-LPLTTFPSVSFTDPFKTINLLLSASLNRAQHLKTPQSKS 66
Query: 67 NQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP-VA 126
N + +L SYGAYSV L+F GSSLVWFPCTA + C RCSFP V
Sbjct: 67 NTSIQNVSLFPRSYGAYSVSLAFGTPPQNLSFIFDTGSSLVWFPCTAGYRCSRCSFPYVD 126
Query: 127 IATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRCWN 135
ATI+KF+PKLSS+ K++G KCAWIFGPN+K RC N
Sbjct: 127 PATISKFVPKLSSSVKVVGCRNPKCAWIFGPNLKSRCRN 164
BLAST of MS017632 vs. NCBI nr
Match:
XP_023543736.1 (probable aspartyl protease At4g16563 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 79/162 (48.77%), Postives = 91/162 (56.17%), Query Frame = 0
Query: 3 FPFRPFLFS-YSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNG 62
FP PFL S + S SSSSS+TT+TLPLT F SL F H
Sbjct: 4 FPI-PFLLSIVLLLSASSSSSSTTVTLPLTVFPSLPFTHPWKNIKHLVSASLTRAQHLKT 63
Query: 63 PRTETNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCS 122
PR ++N + L SYGAYS+ L+F GSSLVWFPCTA + C CS
Sbjct: 64 PRIKSNTSIQNVALFPRSYGAYSISLAFGTPPQSLSLVFDTGSSLVWFPCTAGYRCSNCS 123
Query: 123 FP-VAIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRC 133
FP V ATI KFIPKLSS+AKIIG KC+WIFGPN+K C
Sbjct: 124 FPNVDAATIPKFIPKLSSSAKIIGCRNRKCSWIFGPNLKSLC 164
BLAST of MS017632 vs. ExPASy TrEMBL
Match:
A0A6J1EDJ0 (probable aspartyl protease At4g16563 OS=Cucurbita moschata OX=3662 GN=LOC111433208 PE=3 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 78/158 (49.37%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 7 PFLFS-YSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRTE 66
PFL S + S SSSSS+TT+TLPLT F SL F H PRT+
Sbjct: 7 PFLLSIVLLLSASSSSSSTTVTLPLTVFPSLPFAHPWKNIKHLVSASLTRAQHLKTPRTK 66
Query: 67 TNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP-V 126
+N + L SYGAYS+ L+F GSSLVWFPCTA + C CSFP V
Sbjct: 67 SNTSIQNVALFPRSYGAYSISLAFGTPPQSLSLVFDTGSSLVWFPCTAGYRCSNCSFPNV 126
Query: 127 AIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRC 133
ATI KFIPKLSS+AKIIG KC+WIFGPN+K C
Sbjct: 127 DAATIPKFIPKLSSSAKIIGCRNRKCSWIFGPNLKTLC 164
BLAST of MS017632 vs. ExPASy TrEMBL
Match:
A0A0A0KHK2 (Peptidase A1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G454470 PE=3 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 5.7e-23
Identity = 74/159 (46.54%), Postives = 93/159 (58.49%), Query Frame = 0
Query: 7 PFLFSYSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRTET 66
PFLFS + +SSSS+TT+ LPLT F S+ F H P++++
Sbjct: 7 PFLFSIFLLLPTSSSSSTTV-LPLTTFPSVSFTDPFKTINLLLSASLNRAQHLKTPQSKS 66
Query: 67 NQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP-VA 126
N + +L SYGAYSV L+F GSSLVWFPCTA + C RCSFP V
Sbjct: 67 NTSIQNVSLFPRSYGAYSVSLAFGTPPQNLSFIFDTGSSLVWFPCTAGYRCSRCSFPYVD 126
Query: 127 IATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRCWN 135
ATI+KF+PKLSS+ K++G KCAWIFGPN+K RC N
Sbjct: 127 PATISKFVPKLSSSVKVVGCRNPKCAWIFGPNLKSRCRN 164
BLAST of MS017632 vs. ExPASy TrEMBL
Match:
A0A6J1IMR7 (probable aspartyl protease At4g16563 OS=Cucurbita maxima OX=3661 GN=LOC111478813 PE=3 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 4.8e-22
Identity = 74/161 (45.96%), Postives = 89/161 (55.28%), Query Frame = 0
Query: 3 FPFRPFLFSYSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGP 62
FP + L + S SSSSS+ T+TLPLTAF SL H P
Sbjct: 4 FPIQFLLSIVLLLSASSSSSSITVTLPLTAFPSLPLTHPWKNIKHLVSASLARAQHLKTP 63
Query: 63 RTETNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSF 122
+T++N + L SYGAYS+ L+F GSSLVWFPCTA + C CSF
Sbjct: 64 KTKSNTSIQNVALFPRSYGAYSISLAFGTPPQSLSLVFDTGSSLVWFPCTAGYRCSNCSF 123
Query: 123 P-VAIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRC 133
P V ATI KFIPKLSS+A+IIG KC+WIFGPN+K C
Sbjct: 124 PNVDAATIPKFIPKLSSSARIIGCRNRKCSWIFGPNLKSSC 164
BLAST of MS017632 vs. ExPASy TrEMBL
Match:
A0A5D3CAS4 (Aspartic proteinase nepenthesin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001760 PE=3 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 8.3e-22
Identity = 71/161 (44.10%), Postives = 91/161 (56.52%), Query Frame = 0
Query: 5 FRPFLFSYSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRT 64
F P F +SI +SS+++ITLPLT F S+ F H P++
Sbjct: 3 FLPIPFLFSIFLLLPTSSSSSITLPLTTFPSIPFTDPLKTINHLLSASLSRAQHLKSPQS 62
Query: 65 ETNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP- 124
++N + +L SYGAY+V L+F GSSLVWFPCTA + C CSFP
Sbjct: 63 KSNTSTENVSLFPRSYGAYAVSLAFGTPPQNLSFIFDTGSSLVWFPCTAGYRCAHCSFPH 122
Query: 125 VAIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRCWN 135
V ATI+KF+PKLSS+ KI+G KCAWIFGPN+K RC N
Sbjct: 123 VDPATISKFVPKLSSSVKIVGCRNPKCAWIFGPNLKSRCRN 163
BLAST of MS017632 vs. ExPASy TrEMBL
Match:
A0A5A7SGF9 (Aspartic proteinase nepenthesin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00670 PE=3 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 3.1e-21
Identity = 70/161 (43.48%), Postives = 90/161 (55.90%), Query Frame = 0
Query: 5 FRPFLFSYSIASTSSSSSNTTITLPLTAFSSLEF-----------------QIHGNGPRT 64
F P F +SI +SS+++ITLPL F S+ F H P++
Sbjct: 3 FLPIPFLFSIFLLLPTSSSSSITLPLATFPSIPFTDPLKTINHLLSASLSRAQHLKSPQS 62
Query: 65 ETNQAHSPRNLLTCSYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFP- 124
++N + +L SYGAY+V L+F GSSLVWFPCTA + C CSFP
Sbjct: 63 KSNTSTENVSLFPRSYGAYAVSLAFGTPPQNLSFIFDTGSSLVWFPCTAGYRCAHCSFPH 122
Query: 125 VAIATITKFIPKLSSAAKIIGYGKWKCAWIFGPNVKFRCWN 135
V ATI+KF+PKLSS+ KI+G KCAWIFGPN+K RC N
Sbjct: 123 VDPATISKFVPKLSSSVKIVGCRNPKCAWIFGPNLKSRCRN 163
BLAST of MS017632 vs. TAIR 10
Match:
AT3G52500.1 (Eukaryotic aspartyl protease family protein )
HSP 1 Score: 70.9 bits (172), Expect = 9.0e-13
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 0
Query: 62 SYGAYSVFLSF-------------GSSLVWFPCTAHFLCFRCSFPVAIAT-ITKFIPKLS 121
SYG YSV LSF GSSLVW PCT+ +LC C F T I +FIPK S
Sbjct: 86 SYGGYSVSLSFGTPSQTIPFVFDTGSSLVWLPCTSRYLCSGCDFSGLDPTLIPRFIPKNS 145
Query: 122 SAAKIIGYGKWKCAWIFGPNVKFR 132
S++KIIG KC +++GPNV+ R
Sbjct: 146 SSSKIIGCQSPKCQFLYGPNVQCR 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022925946.1 | 3.1e-23 | 49.37 | probable aspartyl protease At4g16563 [Cucurbita moschata] >KAG6604319.1 Aspartic... | [more] |
KAG7034471.1 | 5.3e-23 | 49.37 | Aspartic proteinase nepenthesin-1, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038881211.1 | 9.0e-23 | 49.70 | probable aspartyl protease At4g16563 [Benincasa hispida] | [more] |
XP_011657732.1 | 1.2e-22 | 46.54 | probable aspartyl protease At4g16563 [Cucumis sativus] >KGN48299.1 hypothetical ... | [more] |
XP_023543736.1 | 1.5e-22 | 48.77 | probable aspartyl protease At4g16563 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EDJ0 | 1.5e-23 | 49.37 | probable aspartyl protease At4g16563 OS=Cucurbita moschata OX=3662 GN=LOC1114332... | [more] |
A0A0A0KHK2 | 5.7e-23 | 46.54 | Peptidase A1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G45447... | [more] |
A0A6J1IMR7 | 4.8e-22 | 45.96 | probable aspartyl protease At4g16563 OS=Cucurbita maxima OX=3661 GN=LOC111478813... | [more] |
A0A5D3CAS4 | 8.3e-22 | 44.10 | Aspartic proteinase nepenthesin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5A7SGF9 | 3.1e-21 | 43.48 | Aspartic proteinase nepenthesin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT3G52500.1 | 9.0e-13 | 48.81 | Eukaryotic aspartyl protease family protein | [more] |