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MS017629 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTCATCTGCTTTCTGTGCATGGCTTTCCCAGATGAAGGCTCTTCTAAATGGATCAAAGTTAACGAAAAAAGAACGCTTCACGACGTTCTAATGGCGCCTAACTGCCTCATACCGGGAATACCAGGTGCGCCGTTATGTTAATTATTTGTGAACATTATAACTATTTTGCTGTTGCAGCAAACCTAGTGATAATGCCTTTTGTAATCTCTGCATTTTTCCCCTCTCATTCTCTCTGTCTTTCTCTCGAATGCAGTCTTTTATGTTGTTTCGAGGAACTCAAAATTTTACAAAGATTTCAAAGCTGGGAGATGGGGTCCTCCTTCG ATTGTCATCTGCTTTCTGTGCATGGCTTTCCCAGATGAAGGCTCTTCTAAATGGATCAAAGTTAACGAAAAAAGAACGCTTCACGACGTTCTAATGGCGCCTAACTGCCTCATACCGGGAATACCAGTCTTTTATGTTGTTTCGAGGAACTCAAAATTTTACAAAGATTTCAAAGCTGGGAGATGGGGTCCTCCTTCG ATTGTCATCTGCTTTCTGTGCATGGCTTTCCCAGATGAAGGCTCTTCTAAATGGATCAAAGTTAACGAAAAAAGAACGCTTCACGACGTTCTAATGGCGCCTAACTGCCTCATACCGGGAATACCAGTCTTTTATGTTGTTTCGAGGAACTCAAAATTTTACAAAGATTTCAAAGCTGGGAGATGGGGTCCTCCTTCG IVICFLCMAFPDEGSSKWIKVNEKRTLHDVLMAPNCLIPGIPVFYVVSRNSKFYKDFKAGRWGPPS Homology
BLAST of MS017629 vs. NCBI nr
Match: XP_022159856.1 (tetratricopeptide repeat protein 4 homolog isoform X2 [Momordica charantia]) HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MS017629 vs. NCBI nr
Match: XP_022159855.1 (tetratricopeptide repeat protein 4 homolog isoform X1 [Momordica charantia]) HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MS017629 vs. NCBI nr
Match: XP_011651622.1 (tetratricopeptide repeat protein 4 homolog [Cucumis sativus] >KGN58403.2 hypothetical protein Csa_017563 [Cucumis sativus]) HSP 1 Score: 106.7 bits (265), Expect = 7.9e-20 Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of MS017629 vs. NCBI nr
Match: XP_008447360.1 (PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis melo]) HSP 1 Score: 103.6 bits (257), Expect = 6.7e-19 Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of MS017629 vs. NCBI nr
Match: KAB2602023.1 (tetratricopeptide repeat protein 4-like protein [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18 Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of MS017629 vs. ExPASy Swiss-Prot
Match: Q54M20 (Tetratricopeptide repeat protein 4 homolog OS=Dictyostelium discoideum OX=44689 GN=ttc4 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 1.5e-05 Identity = 20/45 (44.44%), Postives = 27/45 (60.00%), Query Frame = 0
BLAST of MS017629 vs. ExPASy TrEMBL
Match: A0A6J1DZY6 (tetratricopeptide repeat protein 4 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026147 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.4e-24 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MS017629 vs. ExPASy TrEMBL
Match: A0A6J1E576 (tetratricopeptide repeat protein 4 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026147 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.4e-24 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MS017629 vs. ExPASy TrEMBL
Match: A0A0A0LC81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G611370 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21 Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0
BLAST of MS017629 vs. ExPASy TrEMBL
Match: A0A1S3BHV4 (tetratricopeptide repeat protein 4 homolog OS=Cucumis melo OX=3656 GN=LOC103489830 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.2e-19 Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of MS017629 vs. ExPASy TrEMBL
Match: A0A5N5FGL6 (Tetratricopeptide repeat protein 4-like protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_003028 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18 Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of MS017629 vs. TAIR 10
Match: AT1G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 86.7 bits (213), Expect = 7.8e-18 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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