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MS017626 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTACGAGGATGAGGAAAAAACTCTTGCTCCTCCAAGTTGTTTGCCAGATAGAAGGTTGGAGCGGCACAGATTGATTCGTGTATATATCATGATTTTTCTAGTGCAGTTGCAATCTATGAGGACCACTGCTGTGGCAGGGATCAAATACCAACAGAGACGGTTCAGGTGTATATA ATTTACGAGGATGAGGAAAAAACTCTTGCTCCTCCAAGTTGTTTGCCAGATAGAAGGTTGGAGGCACAGATTGATTCGTGTATATATCATGATTTTTCTAGTGCAGTTGCAATCTATGAGGACCACTGCTGTGGCAGGGATCAAATACCAACAGAGACGGTTCAGGTGTATATA ATTTACGAGGATGAGGAAAAAACTCTTGCTCCTCCAAGTTGTTTGCCAGATAGAAGGTTGGAGGCACAGATTGATTCGTGTATATATCATGATTTTTCTAGTGCAGTTGCAATCTATGAGGACCACTGCTGTGGCAGGGATCAAATACCAACAGAGACGGTTCAGGTGTATATA IYEDEEKTLAPPSCLPDRRLEAQIDSCIYHDFSSAVAIYEDHCCGRDQIPTETVQVYI Homology
BLAST of MS017626 vs. NCBI nr
Match: XP_022157319.1 (WD repeat-containing protein 26 [Momordica charantia] >XP_022157327.1 WD repeat-containing protein 26 [Momordica charantia]) HSP 1 Score: 100.1 bits (248), Expect = 6.5e-18 Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS017626 vs. NCBI nr
Match: TYK19007.1 (WD repeat-containing protein 26 [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 1.9e-17 Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of MS017626 vs. NCBI nr
Match: XP_011651627.1 (WD repeat-containing protein WDS homolog [Cucumis sativus] >KAE8650834.1 hypothetical protein Csa_017638 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 3.2e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS017626 vs. NCBI nr
Match: XP_008447357.1 (PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 26 [Cucumis melo]) HSP 1 Score: 97.8 bits (242), Expect = 3.2e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS017626 vs. NCBI nr
Match: XP_038888993.1 (WD repeat-containing protein WDS homolog [Benincasa hispida]) HSP 1 Score: 97.8 bits (242), Expect = 3.2e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS017626 vs. ExPASy Swiss-Prot
Match: Q9FND4 (WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana OX=3702 GN=WDS PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 9.4e-12 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of MS017626 vs. ExPASy Swiss-Prot
Match: Q9FNN2 (WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR26 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.7e-05 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of MS017626 vs. ExPASy TrEMBL
Match: A0A6J1DW56 (WD repeat-containing protein 26 OS=Momordica charantia OX=3673 GN=LOC111024047 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.1e-18 Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS017626 vs. ExPASy TrEMBL
Match: A0A5D3D618 (WD repeat-containing protein 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00330 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.1e-18 Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of MS017626 vs. ExPASy TrEMBL
Match: A0A0A0L8N6 (LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G611890 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.1e-18 Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of MS017626 vs. ExPASy TrEMBL
Match: A0A1S3BGP5 (LOW QUALITY PROTEIN: WD repeat-containing protein 26 OS=Cucumis melo OX=3656 GN=LOC103489827 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS017626 vs. ExPASy TrEMBL
Match: A0A6J1HGL5 (WD repeat-containing protein WDS homolog OS=Cucurbita moschata OX=3662 GN=LOC111463906 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.7e-17 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of MS017626 vs. TAIR 10
Match: AT5G43920.1 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 70.1 bits (170), Expect = 6.7e-13 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of MS017626 vs. TAIR 10
Match: AT5G08560.1 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.2e-06 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of MS017626 vs. TAIR 10
Match: AT5G08560.2 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.2e-06 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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