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MS017609 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTTTGCCTTGCACCTTAGTAAGACAAACTAAAGGATTTATTTTATGTTACTTTCGTGTATTTTGATCGAAAACTTTCTGACCTTTCTTCACTTTCGTCTCATTTTTCTCAAAGCTGCTCTCTGGTTTGTTTCAAGAAACACAAAGGTACTGTTATTGAAAACTTGGATACTCTTGTTGTATTTGGGTTGTATGTTATAATTTTTGTAAGCAGTTTCATATTCATATGGTCTTTAGTTCTAGAACAACTATCAAGAAATGCAAGTTTGGATAGACAACCAAATTGATCACGAATACTATTTGCTTCAAAACCTACAGTGCTGTTGCCTTGTTTTCTTGAAGGAGGGAAAATTTTTTGTACCTTTTATAAGAATGAATTGATATTAACTTGAGGGTCTGGAATCTGTTAAATGCTTATTAGTTACGTTTTTTAAGCTATGTTACTTGAATGTATGGCTCCAATAAATAGTTCATAGGGTTTTCTTTTGTAATTCTACTCACTTTCTGTGATTAATGTTCTATTCTATTAGTATGATGTCTTACGTAATGTGCCACTTGTGCAGAAGTTCCTTGTGTTAAGCCTGTGTCTGCAGGGGACCAATCAAGTAAGACTAACTCTATTCTCATGCTGAATGCACATTCGTAGACAGCTGAATAAATGTCTATGGAGTTCCTTCCTGATTCTAGCCTTCCTGGGTGCTGTAGAAGTTAATTATCTTTCTTTTCCCCATTCATTCTTCAAGCATTCTTTTTGCTCACCGAGTTTTTTGTTCTCTGTTTTCAGCTGCTCCTAATGGATCACTTGTAGATAGGCCAATATGTGTCGAAGACCAAAGTGAAGTACTTGAAAAGTCGCAGCTGGAGGCTATCGGTATTGATTCATGATTACTGACTTATTTACCTCAATTTATACATGGGTCATTTGGGCCCATAAAACACTTGACATGCCTTTATAATTCTTTGTAAGAGAAATATAAAAAATTTATGATGATTATGAGAGACAAAAAAATCTTCGGTTGTCGAAGTGAGAAATGATTACAGGATTAGGTCACATGATAATTCTAGGATAAGATAGCCTTTTGAAACATTTGTATGGCTGAACTGCCGTTGGATGGTAAAATATTTTTTGAGAAGGGGTTTAAAGTTTGAACAATTTAACAATTTCTATGTCGATGAGAAGCTAGGCAGGGAAACTCTGTTTATCACGGTTTTATTTGTGTGTTAAGAATAACTTTGTAGCTTGTTATTAGGACATTAATGAACCTACAATCTGGGTTTTTTACCACTTATCCTTGTGCATCTTTCAACAGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAGCCTTCAGAAGCTCATCTGTGCCATTGGTAGTTCACCGGATCCAGAAACCGTGAGTTGTCTTCATGTTCCATTACGTGGGAAATTTGACTCTTATAACAAAATATTGCCCCATTATACTTACCAGCAAATTCTAGTGAATGTGAACATCAATAATTAAAGTTGTTGGCTTAATTTGGTTATATTAATTGTTCTCATTAGGAACTTGATAGAGCTATGGAAGACGAAGCATTTCGCATATTCAGCAGCAAGGTATTATTTTCAGTTAAAGTG ATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTTTGCCTTGCACCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTTCCTTGTGTTAAGCCTGTGTCTGCAGGGGACCAATCAACTGCTCCTAATGGATCACTTGTAGATAGGCCAATATGTGTCGAAGACCAAAGTGAAGTACTTGAAAAGTCGCAGCTGGAGGCTATCGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAGCCTTCAGAAGCTCATCTGTGCCATTGGTAGTTCACCGGATCCAGAAACCGAACTTGATAGAGCTATGGAAGACGAAGCATTTCGCATATTCAGCAGCAAGGTATTATTTTCAGTTAAAGTG ATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTTTGCCTTGCACCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTTCCTTGTGTTAAGCCTGTGTCTGCAGGGGACCAATCAACTGCTCCTAATGGATCACTTGTAGATAGGCCAATATGTGTCGAAGACCAAAGTGAAGTACTTGAAAAGTCGCAGCTGGAGGCTATCGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAGCCTTCAGAAGCTCATCTGTGCCATTGGTAGTTCACCGGATCCAGAAACCGAACTTGATAGAGCTATGGAAGACGAAGCATTTCGCATATTCAGCAGCAAGGTATTATTTTCAGTTAAAGTG MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFRIFSSKVLFSVKV Homology
BLAST of MS017609 vs. NCBI nr
Match: XP_022157884.1 (zinc finger HIT domain-containing protein 3 isoform X1 [Momordica charantia]) HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of MS017609 vs. NCBI nr
Match: XP_022995777.1 (zinc finger HIT domain-containing protein 3 [Cucurbita maxima] >XP_022995779.1 zinc finger HIT domain-containing protein 3 [Cucurbita maxima]) HSP 1 Score: 223.8 bits (569), Expect = 8.8e-55 Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of MS017609 vs. NCBI nr
Match: XP_023533050.1 (zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023533051.1 zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023533053.1 zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54 Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of MS017609 vs. NCBI nr
Match: XP_022931150.1 (zinc finger HIT domain-containing protein 3 [Cucurbita moschata] >XP_022931151.1 zinc finger HIT domain-containing protein 3 [Cucurbita moschata]) HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54 Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of MS017609 vs. NCBI nr
Match: KAG7036274.1 (Zinc finger HIT domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54 Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of MS017609 vs. ExPASy Swiss-Prot
Match: Q15649 (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ZNHIT3 PE=1 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 7.1e-07 Identity = 37/132 (28.03%), Postives = 65/132 (49.24%), Query Frame = 0
BLAST of MS017609 vs. ExPASy Swiss-Prot
Match: Q6UIM1 (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta OX=9544 GN=ZNHIT3 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06 Identity = 36/132 (27.27%), Postives = 64/132 (48.48%), Query Frame = 0
BLAST of MS017609 vs. ExPASy Swiss-Prot
Match: Q9CQK1 (Zinc finger HIT domain-containing protein 3 OS=Mus musculus OX=10090 GN=Znhit3 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06 Identity = 35/128 (27.34%), Postives = 63/128 (49.22%), Query Frame = 0
BLAST of MS017609 vs. ExPASy Swiss-Prot
Match: Q2KIH1 (Zinc finger HIT domain-containing protein 3 OS=Bos taurus OX=9913 GN=ZNHIT3 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05 Identity = 22/37 (59.46%), Postives = 24/37 (64.86%), Query Frame = 0
BLAST of MS017609 vs. ExPASy Swiss-Prot
Match: Q6UIM2 (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes OX=9598 GN=ZNHIT3 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 8.7e-05 Identity = 32/123 (26.02%), Postives = 59/123 (47.97%), Query Frame = 0
BLAST of MS017609 vs. ExPASy TrEMBL
Match: A0A6J1DXU2 (zinc finger HIT domain-containing protein 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024491 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of MS017609 vs. ExPASy TrEMBL
Match: A0A6J1JZX2 (zinc finger HIT domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491210 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.3e-55 Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of MS017609 vs. ExPASy TrEMBL
Match: A0A6J1ESW0 (zinc finger HIT domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111437419 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54 Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of MS017609 vs. ExPASy TrEMBL
Match: A0A0A0KDK5 (HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403610 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53 Identity = 108/127 (85.04%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of MS017609 vs. ExPASy TrEMBL
Match: A0A1S3CM88 (zinc finger HIT domain-containing protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502587 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.0e-53 Identity = 108/127 (85.04%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of MS017609 vs. TAIR 10
Match: AT4G28820.1 (HIT-type Zinc finger family protein ) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28 Identity = 71/158 (44.94%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of MS017609 vs. TAIR 10
Match: AT4G28820.2 (HIT-type Zinc finger family protein ) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-28 Identity = 70/157 (44.59%), Postives = 83/157 (52.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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