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MS017607 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTTGTCTGTCGAGAAATGACGATTATTTTGAAATATTGTATGGCTTTACTTTTGGTTGTAGTATTGGTGAGGGTTGAACCGTGCTTTGGGGGAATTCCCTTTGAACCTTGGGAAGTGAAAGTAGTTAACAACATGACAAGTGGAGGTACGTTATTTCTTCACTGCAAATCCAAAGACGATGATTTGGGACAACATAATCTCCGAGTTGGGAAATATTTTACATGGAGATTTAGGATAAATATATCATCGTCCACACTGTTTTGGTGCTACATGCGAAATAAACATGGTCGACATGTCTCTTTAGATGTGTTTAACGCAAAAGATGATGATTTGTTGTACTACAAATGTTGGGAGGGTCGCGTCTGCATTTGGTCTGTAAGAGATGGTGGAATCTATGTGAGAAATGATTGGAACGATGATAAGTTTGATTTTGTAGCTAAATGGGAGGTT AAAGTTGTCTGTCGAGAAATGACGATTATTTTGAAATATTGTATGGCTTTACTTTTGGTTGTAGTATTGGTGAGGGTTGAACCGTGCTTTGGGGGAATTCCCTTTGAACCTTGGGAAGTGAAAGTAGTTAACAACATGACAAGTGGAGGTACGTTATTTCTTCACTGCAAATCCAAAGACGATGATTTGGGACAACATAATCTCCGAGTTGGGAAATATTTTACATGGAGATTTAGGATAAATATATCATCGTCCACACTGTTTTGGTGCTACATGCGAAATAAACATGGTCGACATGTCTCTTTAGATGTGTTTAACGCAAAAGATGATGATTTGTTGTACTACAAATGTTGGGAGGGTCGCGTCTGCATTTGGTCTGTAAGAGATGGTGGAATCTATGTGAGAAATGATTGGAACGATGATAAGTTTGATTTTGTAGCTAAATGGGAGGTT AAAGTTGTCTGTCGAGAAATGACGATTATTTTGAAATATTGTATGGCTTTACTTTTGGTTGTAGTATTGGTGAGGGTTGAACCGTGCTTTGGGGGAATTCCCTTTGAACCTTGGGAAGTGAAAGTAGTTAACAACATGACAAGTGGAGGTACGTTATTTCTTCACTGCAAATCCAAAGACGATGATTTGGGACAACATAATCTCCGAGTTGGGAAATATTTTACATGGAGATTTAGGATAAATATATCATCGTCCACACTGTTTTGGTGCTACATGCGAAATAAACATGGTCGACATGTCTCTTTAGATGTGTTTAACGCAAAAGATGATGATTTGTTGTACTACAAATGTTGGGAGGGTCGCGTCTGCATTTGGTCTGTAAGAGATGGTGGAATCTATGTGAGAAATGATTGGAACGATGATAAGTTTGATTTTGTAGCTAAATGGGAGGTT KVVCREMTIILKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWEV Homology
BLAST of MS017607 vs. NCBI nr
Match: XP_022931006.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 151.0 bits (380), Expect = 8.3e-33 Identity = 69/140 (49.29%), Postives = 98/140 (70.00%), Query Frame = 0
BLAST of MS017607 vs. NCBI nr
Match: XP_023532937.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.5 bits (371), Expect = 9.2e-32 Identity = 68/140 (48.57%), Postives = 97/140 (69.29%), Query Frame = 0
BLAST of MS017607 vs. NCBI nr
Match: KAE8651473.1 (hypothetical protein Csa_001696 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 4.0e-27 Identity = 60/140 (42.86%), Postives = 92/140 (65.71%), Query Frame = 0
BLAST of MS017607 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 131.7 bits (330), Expect = 5.2e-27 Identity = 63/139 (45.32%), Postives = 87/139 (62.59%), Query Frame = 0
BLAST of MS017607 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia]) HSP 1 Score: 129.4 bits (324), Expect = 2.6e-26 Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of MS017607 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of MS017607 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.9e-21 Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of MS017607 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11 Identity = 42/134 (31.34%), Postives = 66/134 (49.25%), Query Frame = 0
BLAST of MS017607 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.0e-10 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of MS017607 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.0e-10 Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of MS017607 vs. ExPASy TrEMBL
Match: A0A6J1ESI0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437333 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 4.0e-33 Identity = 69/140 (49.29%), Postives = 98/140 (70.00%), Query Frame = 0
BLAST of MS017607 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.5e-27 Identity = 63/139 (45.32%), Postives = 87/139 (62.59%), Query Frame = 0
BLAST of MS017607 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of MS017607 vs. ExPASy TrEMBL
Match: A0A1S4DWP0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103490053 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of MS017607 vs. ExPASy TrEMBL
Match: A0A5A7UB41 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008560 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 4.0e-25 Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 0
BLAST of MS017607 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of MS017607 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 101.3 bits (251), Expect = 7.0e-22 Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of MS017607 vs. TAIR 10
Match: AT1G26797.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12 Identity = 36/122 (29.51%), Postives = 60/122 (49.18%), Query Frame = 0
BLAST of MS017607 vs. TAIR 10
Match: AT1G26799.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 67.8 bits (164), Expect = 8.6e-12 Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 0
BLAST of MS017607 vs. TAIR 10
Match: AT1G26796.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11 Identity = 37/110 (33.64%), Postives = 55/110 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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