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MS017604 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCATCTCTATTTCACAATTTTTCTTCCATTTCTCCACACCTTTCAATCCGCCATAGAAACCCACCCATTTTTCCCCATTCCCAGTTCCTCCCTCCCAACTCCTTGAAACTCAAAAAACAATCTCTCTTCTCAAATTCGCAAATTCGGAAGCTAACAGCTCGAGGGTCTCCTTCTTTCCCTCTTGTATATGCTGCACAGAACAATTTCTTGAGAGGTACCCTTCATTTTCTTTCTTACTTTCTTCTTTGTTTCATCTTTTGTGGCTTCTGAATTTGCCTCAATGCTGTTTTCTAGTGGGTTTGTTTGGAATTTCAATAAGTTATTTGAACTGGGTCAAGTGGGCTGAAATTGAACTGGGTCATTCGTTATTTGTACTCTATTATTCTGTTTTACAATGATATGGTGAGGTTGTAATTTTGATAAATCCTATGGAACAGTCTTTCAGACAGTTTGGAAGATTGGTAAGGATGGAATTGAGGCAGGAACAGGCCTGGTACCTGTAAGTTTTTCTTTTCTGTTTATTATCCAATTCTTCCCCTTTTAAAACGTAATTTTCAGTTCATTTAACGTCTAATGCGGATGATTTTTCAGTGGCAAGAAGAAAGAGATTATGGAGAACACAATATAGATAAACTAATTGTCTATTTGTGCGTTTGTTTTGTAGGATTCTGTACCAAGGCCTATAGCAAGGATATCTGTAGCAATAGTTGCATCAACTATTACACTTTTTTTGCTCAAGTCAGTCCTGTCTACGGCCTTGTTTGTGCTGGTATTGCAATACTCTTAC ATGGCTTCTTCATCTCTATTTCACAATTTTTCTTCCATTTCTCCACACCTTTCAATCCGCCATAGAAACCCACCCATTTTTCCCCATTCCCAGTTCCTCCCTCCCAACTCCTTGAAACTCAAAAAACAATCTCTCTTCTCAAATTCGCAAATTCGGAAGCTAACAGCTCGAGGGTCTCCTTCTTTCCCTCTTGTATATGCTGCACAGAACAATTTCTTGAGAGTCTTTCAGACAGTTTGGAAGATTGGTAAGGATGGAATTGAGGCAGGAACAGGCCTGGTACCTGATTCTGTACCAAGGCCTATAGCAAGGATATCTGTAGCAATAGTTGCATCAACTATTACACTTTTTTTGCTCAAGTCAGTCCTGTCTACGGCCTTGTTTGTGCTGGTATTGCAATACTCTTAC ATGGCTTCTTCATCTCTATTTCACAATTTTTCTTCCATTTCTCCACACCTTTCAATCCGCCATAGAAACCCACCCATTTTTCCCCATTCCCAGTTCCTCCCTCCCAACTCCTTGAAACTCAAAAAACAATCTCTCTTCTCAAATTCGCAAATTCGGAAGCTAACAGCTCGAGGGTCTCCTTCTTTCCCTCTTGTATATGCTGCACAGAACAATTTCTTGAGAGTCTTTCAGACAGTTTGGAAGATTGGTAAGGATGGAATTGAGGCAGGAACAGGCCTGGTACCTGATTCTGTACCAAGGCCTATAGCAAGGATATCTGTAGCAATAGTTGCATCAACTATTACACTTTTTTTGCTCAAGTCAGTCCTGTCTACGGCCTTGTTTGTGCTGGTATTGCAATACTCTTAC MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPRPIARISVAIVASTITLFLLKSVLSTALFVLVLQYSY Homology
BLAST of MS017604 vs. NCBI nr
Match: XP_022159605.1 (uncharacterized protein LOC111025970 [Momordica charantia]) HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60 Identity = 128/132 (96.97%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of MS017604 vs. NCBI nr
Match: XP_004152015.1 (uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus] >KAE8650842.1 hypothetical protein Csa_017556 [Cucumis sativus]) HSP 1 Score: 190.7 bits (483), Expect = 8.5e-45 Identity = 106/132 (80.30%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of MS017604 vs. NCBI nr
Match: XP_038887965.1 (uncharacterized protein LOC120077928 [Benincasa hispida] >XP_038887966.1 uncharacterized protein LOC120077928 [Benincasa hispida]) HSP 1 Score: 187.2 bits (474), Expect = 9.4e-44 Identity = 102/132 (77.27%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of MS017604 vs. NCBI nr
Match: XP_008447333.1 (PREDICTED: uncharacterized protein LOC103489804 [Cucumis melo]) HSP 1 Score: 184.1 bits (466), Expect = 8.0e-43 Identity = 105/132 (79.55%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of MS017604 vs. NCBI nr
Match: XP_023532771.1 (uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo] >XP_023532772.1 uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.2 bits (461), Expect = 3.0e-42 Identity = 100/132 (75.76%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of MS017604 vs. ExPASy TrEMBL
Match: A0A6J1DZ75 (uncharacterized protein LOC111025970 OS=Momordica charantia OX=3673 GN=LOC111025970 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 9.2e-61 Identity = 128/132 (96.97%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of MS017604 vs. ExPASy TrEMBL
Match: A0A0A0LCA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624000 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 8.3e-46 Identity = 108/132 (81.82%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of MS017604 vs. ExPASy TrEMBL
Match: A0A1S3BHT2 (uncharacterized protein LOC103489804 OS=Cucumis melo OX=3656 GN=LOC103489804 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.9e-43 Identity = 105/132 (79.55%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of MS017604 vs. ExPASy TrEMBL
Match: A0A6J1ESP6 (uncharacterized protein LOC111437405 OS=Cucurbita moschata OX=3662 GN=LOC111437405 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.9e-42 Identity = 100/132 (75.76%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of MS017604 vs. ExPASy TrEMBL
Match: A0A6J1K1P0 (uncharacterized protein LOC111491610 OS=Cucurbita maxima OX=3661 GN=LOC111491610 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.6e-41 Identity = 99/132 (75.00%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of MS017604 vs. TAIR 10
Match: AT4G13220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 98.2 bits (243), Expect = 5.4e-21 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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