Homology
BLAST of MS017601 vs. NCBI nr
Match:
XP_022159266.1 (transcription initiation factor IIF subunit alpha [Momordica charantia])
HSP 1 Score: 1011.1 bits (2613), Expect = 3.5e-291
Identity = 538/540 (99.63%), Postives = 538/540 (99.63%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL
Sbjct: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
Query: 241 RGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
RGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE
Sbjct: 241 RGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 301 TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD 360
TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD
Sbjct: 301 TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD 360
Query: 361 GEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKR 420
GEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKR
Sbjct: 361 GEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKR 420
Query: 421 KLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEE 480
KLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEE
Sbjct: 421 KLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEE 480
Query: 481 IRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 540
IRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 IRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538
BLAST of MS017601 vs. NCBI nr
Match:
XP_004152016.1 (transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >XP_011651639.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >KGN58337.1 hypothetical protein Csa_017587 [Cucumis sativus])
HSP 1 Score: 940.3 bits (2429), Expect = 7.6e-270
Identity = 500/541 (92.42%), Postives = 521/541 (96.30%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDLLLK SCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASAS+DKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL
Sbjct: 61 VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEAARKNRLGL+KK GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGK 420
DGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP PSGS+KGTPS+ K +KGK
Sbjct: 361 DGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420
Query: 421 RKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEE 480
RK NG+DVKPS+ PPKK+KTET+SK+TDEGV TSKSTASKGAPASVKTE + SGPVTEE
Sbjct: 421 RK-NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEE 480
Query: 481 EIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 540
EIRAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPE
Sbjct: 481 EIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 538
BLAST of MS017601 vs. NCBI nr
Match:
XP_038888042.1 (transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida])
HSP 1 Score: 935.6 bits (2417), Expect = 1.9e-268
Identity = 500/541 (92.42%), Postives = 519/541 (95.93%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDL+LKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLMLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYK+GLQGRQL+DALREKYKNRPWLL
Sbjct: 61 VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+ VG SGRGRRK TGDENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKEGVGTSGRGRRKPTGDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEA RKNRLGLNKK GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAQRKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGK 420
DGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP PSGS+KGTPS+ K +KGK
Sbjct: 361 DGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420
Query: 421 RKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEE 480
RK NG+DVKPS+ PPKK+KTET+SKSTDE VSTSKSTASKGAPA VKTE A SGPVTEE
Sbjct: 421 RK-NGEDVKPSSAPPKKMKTETESKSTDE-VSTSKSTASKGAPALVKTEPASHSGPVTEE 480
Query: 481 EIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 540
EIRAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPE
Sbjct: 481 EIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 537
BLAST of MS017601 vs. NCBI nr
Match:
XP_016900419.1 (PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo])
HSP 1 Score: 934.1 bits (2413), Expect = 5.4e-268
Identity = 497/541 (91.87%), Postives = 518/541 (95.75%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLL
Sbjct: 61 VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEX 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEAARKNRLGL+KK GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGK 420
DGEDD+DDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP PSGS+KGTPS+ K +KGK
Sbjct: 361 DGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420
Query: 421 RKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEE 480
RK NG+DVKPS+ PPKK+KTET+ K TDEGV TSKSTASKGAPASVKTE + SGPVTEE
Sbjct: 421 RK-NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEE 480
Query: 481 EIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 540
EIRAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPE
Sbjct: 481 EIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPE 538
BLAST of MS017601 vs. NCBI nr
Match:
XP_022931161.1 (transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 923.3 bits (2385), Expect = 9.6e-265
Identity = 495/542 (91.33%), Postives = 516/542 (95.20%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MS DLLLKPSCSGCGS+T+LYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLRCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRAS+SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLL
Sbjct: 61 VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKD+VGA+GRGRRK T DENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEAARKNRLGLNKK GDDDDEEGPRGG+HD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGNHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DG-EDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKG 420
DG E+DDDDDD EE+ GGTPV SKQKD VKEEAAA+SPSKP PSGS+KGTPS+ K +KG
Sbjct: 361 DGEEEDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKG 420
Query: 421 KRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTE 480
KRK NG+DVKPS+ PPKK+KTET+SKSTDEGVSTS+STASKGA ASVKTE A SGPVTE
Sbjct: 421 KRK-NGEDVKPSSAPPKKMKTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTE 480
Query: 481 EEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKP 540
EEIRAVLRQRTPVTTQDLVAKFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKP
Sbjct: 481 EEIRAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKP 539
BLAST of MS017601 vs. ExPASy Swiss-Prot
Match:
Q9SU25 (Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana OX=3702 GN=RAP74 PE=1 SV=1)
HSP 1 Score: 650.2 bits (1676), Expect = 2.0e-185
Identity = 376/549 (68.49%), Postives = 439/549 (79.96%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MS L L SC GCGS +DLYGS+C+HMTLCL CG+TMA+NK KC++CG VTRLIREYN
Sbjct: 1 MSNCLQLNTSCVGCGSQSDLYGSSCRHMTLCLKCGRTMAQNKSKCHECGTVVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRA+A +DKNYFIGRF++GLPNF K+ +ENKWSL K+ QGRQ +DA REK KN+PW+L
Sbjct: 61 VRAAAPTDKNYFIGRFVTGLPNF--KKGSENKWSLRKDIPQGRQFTDAQREKLKNKPWIL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNA 240
KMKNR+KTADGY+RWMMKAA+NGPA FGEV+ + G GRGR+K++ GDE EGN
Sbjct: 181 KMKNRRKTADGYQRWMMKAANNGPALFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNV 240
Query: 241 SDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDD 300
SDRG+EDEEEEA+RK+RLGLN+KS DDDDEEGPRGGD DMDDDDIEKGDDWEHEEIFTDD
Sbjct: 241 SDRGDEDEEEEASRKSRLGLNRKSNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDD 300
Query: 301 DETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLN 360
DE D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSKSGKELKKLL + GL+
Sbjct: 301 DEAVGNDPEEREDLLAPEIPAPPEIKQDEDDEENEEE-EGGLSKSGKELKKLLGKANGLD 360
Query: 361 DSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASK 420
+SD +DDDD DD EE GT V SKQK+ KEE ++P+KP PSG +GTP + K SK
Sbjct: 361 ESDEDDDDDSDDEEETNYGT-VTNSKQKEAAKEEPVDNAPAKPAPSGPPRGTPPA-KPSK 420
Query: 421 GKRKLN-GDDVKPSNVPPKKVKTETDSKST---DEGVSTSKST----ASKGAPASV-KTE 480
GKRKLN GD KPS+ KKVKTE D KS+ + + SKS A K PAS +
Sbjct: 421 GKRKLNDGDSKKPSSSVQKKVKTENDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASS 480
Query: 481 SALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNG 538
S+ +GPVTE+EIRAVL ++ VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK G
Sbjct: 481 SSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAG 540
BLAST of MS017601 vs. ExPASy Swiss-Prot
Match:
Q54WV4 (General transcription factor IIF subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2f1 PE=3 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 1.2e-12
Identity = 117/424 (27.59%), Postives = 189/424 (44.58%), Query Frame = 0
Query: 114 KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYEYNFNKVAQYK 173
K PW LED G +QG++EG+Q S+ Y+L + Q A+P W YNF +++
Sbjct: 146 KTIPWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQSDGSIKAVPCNDW--YNFRPKKEFQ 205
Query: 174 QLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTG 233
LT EEAE+ MK + + D + + K + G E K R
Sbjct: 206 SLTTEEAEDFMKKKNQEWDVFTSRLQKKTDPSGSGSGGSESSGKKSIEELEEAEHRNRNE 265
Query: 234 DENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEH 293
D N ++ EE ++++A + R ++ +G+D D D DDD GD
Sbjct: 266 DPNRYKTTN--EEKKKKKAPARRREREDEGNGEDGDAPDFESKFDDDDDDTYMDGDG--- 325
Query: 294 EEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLR 353
T +DE + EE ED+ E+K+ + ++N+ E L+ + K
Sbjct: 326 ---LTGEDENQIEEDEEEEDV-DLTEGGLEMKKMIKKQQQQNDSEDDLA-DDDDKKDNNG 385
Query: 354 RTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQ------KDTVKEEAAASSPSKPIPSGS 413
TGG +D D ++DD+D D ++D+ P V K +VK+E SK
Sbjct: 386 GTGGGDDEDDDEDDEDPD-QDDLSNLPKVFGKSNADGTTNSSVKKEDDGGKDSKSSKKSK 445
Query: 414 SKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASV 473
K SS K+ + K K N D N KK+K E S + S S+
Sbjct: 446 KKDKDSSPKSKEKKSKKNKSDSSVDNRESKKIKKEPSSPQAVQPNSPSQQQQQ------- 505
Query: 474 KTESALPSG-PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQ 529
+ ++ P+ P TEE I+ VL++ V + DL+ FK L++ ++K F ++ ++R+
Sbjct: 506 QQQNIDPNDPPFTEEYIKIVLQKSKKVKSLDLINIFKGPLKNPDNKPIFLAMVHNVARVV 549
BLAST of MS017601 vs. ExPASy Swiss-Prot
Match:
Q05913 (General transcription factor IIF subunit 1 OS=Drosophila melanogaster OX=7227 GN=TfIIFalpha PE=1 SV=3)
HSP 1 Score: 47.4 bits (111), Expect = 6.1e-04
Identity = 131/481 (27.23%), Postives = 217/481 (45.11%), Query Frame = 0
Query: 116 RPWLLE--DETGQFQFQGHLEG--SQSATYYLLV-LQGKEFTAIPAGSWYEYNFNKVAQY 175
+PW+L+ +TG+ +F+G EG ++A +Y+ A P W YNF + +Y
Sbjct: 123 QPWILKVGGKTGK-KFKGIREGGVGENAAFYVFTHAPDGAIEAYPLTEW--YNFQPIQRY 182
Query: 176 KQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDA---VGASGRGRR 235
K L+ EEAE++ RKK + Y M++ G E E+ D ++A A+ + +
Sbjct: 183 KSLSAEEAEQEFGRRKKVMN-YFSLMLRKRLRG----DEEEEQDPEEAKLIKAATKKSKE 242
Query: 236 KTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDD----EEGPRGGD-----HDM 295
D +E S+ + E+EE +K K+ D DD +G +G D D+
Sbjct: 243 LKITDMDEWIDSEDESDSEDEEDKKK------KEQEDSDDGKAKGKGKKGADKKKKKRDV 302
Query: 296 DDDDIEKGDDWEHEEIFTDDDETTA---PDREERED---------------LAPEVPAPP 355
DD+ E+ DD + E D D +++ PD E + D L +
Sbjct: 303 DDEAFEESDDGDEEGREMDYDTSSSEDEPDPEAKVDKDMKGVAEEDALRKLLTSDEEEDD 362
Query: 356 EIKQDEDDEDE-------ENEGEGGLSKSGKELKKL----LRRTGGLNDSDGEDDDDDDD 415
E K DE D+++ +++G+ +SK K+ K ++ G DS + D D
Sbjct: 363 EKKSDESDKEDADGEKKKKDKGKDEVSKDKKKKKPTKDDKKGKSNGSGDSSTDFSSDSTD 422
Query: 416 VEEDIGGTP-----VVASKQKDTVKEEAAASSPSKPIPSGSS-----KGTPS-STKASKG 475
E+D+ P VV K K+ KE+ +A+S SK I S S+ TP+ ST AS
Sbjct: 423 SEDDLSNGPPKKKVVVKDKDKEKEKEKESAAS-SKVIASSSNANKSRSATPTLSTDAS-- 482
Query: 476 KRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTE 535
KRK+N ++P ++T + T K+ S P S G +TE
Sbjct: 483 KRKMN-------SLPSDLTASDTSNSPTSTPAKRPKNEISTSLPTSFSGGKVEDYG-ITE 542
Query: 536 EEIRAVLRQRTPVTTQDLVAKFKAR---LRSQEDKNAFAEILRRISRIQKTNGGPSYVVL 537
E +R L+ R P+T +L+ KFK + + S +IL++I+ ++ T G Y+ +
Sbjct: 543 EAVRRYLK-RKPLTATELLTKFKNKKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWI 577
BLAST of MS017601 vs. ExPASy TrEMBL
Match:
A0A6J1E3E1 (Transcription initiation factor IIF subunit alpha OS=Momordica charantia OX=3673 GN=LOC111025673 PE=3 SV=1)
HSP 1 Score: 1011.1 bits (2613), Expect = 1.7e-291
Identity = 538/540 (99.63%), Postives = 538/540 (99.63%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL
Sbjct: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
Query: 241 RGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
RGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE
Sbjct: 241 RGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 301 TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD 360
TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD
Sbjct: 301 TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD 360
Query: 361 GEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKR 420
GEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKR
Sbjct: 361 GEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKR 420
Query: 421 KLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEE 480
KLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEE
Sbjct: 421 KLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEE 480
Query: 481 IRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 540
IRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 IRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538
BLAST of MS017601 vs. ExPASy TrEMBL
Match:
A0A0A0LCA6 (Transcription initiation factor IIF subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_3G624050 PE=3 SV=1)
HSP 1 Score: 940.3 bits (2429), Expect = 3.7e-270
Identity = 500/541 (92.42%), Postives = 521/541 (96.30%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDLLLK SCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASAS+DKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL
Sbjct: 61 VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEAARKNRLGL+KK GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGK 420
DGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP PSGS+KGTPS+ K +KGK
Sbjct: 361 DGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420
Query: 421 RKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEE 480
RK NG+DVKPS+ PPKK+KTET+SK+TDEGV TSKSTASKGAPASVKTE + SGPVTEE
Sbjct: 421 RK-NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEE 480
Query: 481 EIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 540
EIRAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPE
Sbjct: 481 EIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 538
BLAST of MS017601 vs. ExPASy TrEMBL
Match:
A0A1S4DWR2 (Transcription initiation factor IIF subunit alpha OS=Cucumis melo OX=3656 GN=LOC103489800 PE=3 SV=1)
HSP 1 Score: 934.1 bits (2413), Expect = 2.6e-268
Identity = 497/541 (91.87%), Postives = 518/541 (95.75%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLL
Sbjct: 61 VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAE
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEX 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEAARKNRLGL+KK GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGK 420
DGEDD+DDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP PSGS+KGTPS+ K +KGK
Sbjct: 361 DGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420
Query: 421 RKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEE 480
RK NG+DVKPS+ PPKK+KTET+ K TDEGV TSKSTASKGAPASVKTE + SGPVTEE
Sbjct: 421 RK-NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEE 480
Query: 481 EIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPE 540
EIRAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPE
Sbjct: 481 EIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPE 538
BLAST of MS017601 vs. ExPASy TrEMBL
Match:
A0A6J1ESX1 (Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111437424 PE=3 SV=1)
HSP 1 Score: 923.3 bits (2385), Expect = 4.6e-265
Identity = 495/542 (91.33%), Postives = 516/542 (95.20%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MS DLLLKPSCSGCGS+T+LYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLRCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRAS+SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLL
Sbjct: 61 VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKD+VGA+GRGRRK T DENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
RGEEDEEEEAARKNRLGLNKK GDDDDEEGPRGG+HD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGEEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGNHDLDDDDIEKGDDWEHEEIFTDDD 300
Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 ETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
Query: 361 DG-EDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKG 420
DG E+DDDDDD EE+ GGTPV SKQKD VKEEAAA+SPSKP PSGS+KGTPS+ K +KG
Sbjct: 361 DGEEEDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKG 420
Query: 421 KRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTE 480
KRK NG+DVKPS+ PPKK+KTET+SKSTDEGVSTS+STASKGA ASVKTE A SGPVTE
Sbjct: 421 KRK-NGEDVKPSSAPPKKMKTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTE 480
Query: 481 EEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKP 540
EEIRAVLRQRTPVTTQDLVAKFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKP
Sbjct: 481 EEIRAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKP 539
BLAST of MS017601 vs. ExPASy TrEMBL
Match:
A0A6J1K1N5 (Transcription initiation factor IIF subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111491607 PE=3 SV=1)
HSP 1 Score: 914.1 bits (2361), Expect = 2.8e-262
Identity = 492/545 (90.28%), Postives = 515/545 (94.50%), Query Frame = 0
Query: 1 MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
MS DLLLKPSCSGCGS+T+LYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1 MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 61 VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
VRAS+SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLL
Sbjct: 61 VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120
Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEE 180
EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW YNFNKVAQYKQLTLEEAEE
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
Query: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASD 240
KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKD++GA+GRGRRK T DENEGN SD
Sbjct: 181 KMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSIGATGRGRRKPTSDENEGNVSD 240
Query: 241 RGEEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEK-GDDWEHEEIFTDD 300
RGEEDEEEEAARKNRLGLNKK GDDDDEEGPRGGDHD+DDDDIE GDDWEHEEIFTDD
Sbjct: 241 RGEEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIESIGDDWEHEEIFTDD 300
Query: 301 DETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLND 360
DETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRR+GGLND
Sbjct: 301 DETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRSGGLND 360
Query: 361 SDG---EDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKA 420
SDG EDDDDDDD EE+ GGTPV SKQKD VKEEAAA+SPSKP PSGS+KGT S+ K
Sbjct: 361 SDGEEEEDDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTSSTAKT 420
Query: 421 SKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGP 480
+KGKRK NG+DVKPS+ PPKK+KTET+SKSTDEG+STS+STASKGA ASVKTE A SGP
Sbjct: 421 AKGKRK-NGEDVKPSSAPPKKMKTETESKSTDEGMSTSRSTASKGAAASVKTEPASASGP 480
Query: 481 VTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVL 540
VTEEEIRAVLRQRTPVTTQDLVAKFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVL
Sbjct: 481 VTEEEIRAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVL 540
BLAST of MS017601 vs. TAIR 10
Match:
AT4G12610.1 (transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors )
HSP 1 Score: 429.9 bits (1104), Expect = 3.1e-120
Identity = 270/404 (66.83%), Postives = 315/404 (77.97%), Query Frame = 0
Query: 146 LQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPA 205
+Q KEF AIPAGSW YNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA
Sbjct: 1 MQNKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPA 60
Query: 206 AFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEEDEEEEAARKNRLGLNKKSG 265
FGEV+ + G GRGR+K++ GDE EGN SDRG+EDEEEEA+RK+RLGLN+KS
Sbjct: 61 LFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRKSN 120
Query: 266 DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEI 325
DDDDEEGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE D EERED LAPE+PAPPEI
Sbjct: 121 DDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPEI 180
Query: 326 KQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVAS 385
KQDEDDE+ E E EGGLSKSGKELKKLL + GL++SD +DDDD DD EE GT V S
Sbjct: 181 KQDEDDEENEEE-EGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGT-VTNS 240
Query: 386 KQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTET 445
KQK+ KEE ++P+KP PSG +GTP + K SKGKRKLN GD KPS+ KKVKTE
Sbjct: 241 KQKEAAKEEPVDNAPAKPAPSGPPRGTPPA-KPSKGKRKLNDGDSKKPSSSVQKKVKTEN 300
Query: 446 DSKST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTPVTT 505
D KS+ + + SKS A K PAS + S+ +GPVTE+EIRAVL ++ VTT
Sbjct: 301 DPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVTT 360
Query: 506 QDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK 538
QDLV++FKARL+++EDKNAFA ILR+IS+IQK G ++VVLR+
Sbjct: 361 QDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399
BLAST of MS017601 vs. TAIR 10
Match:
AT4G12610.2 (transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors )
HSP 1 Score: 429.9 bits (1104), Expect = 3.1e-120
Identity = 270/404 (66.83%), Postives = 315/404 (77.97%), Query Frame = 0
Query: 146 LQGKEFTAIPAGSWYEYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPA 205
+Q KEF AIPAGSW YNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA
Sbjct: 1 MQNKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPA 60
Query: 206 AFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEEDEEEEAARKNRLGLNKKSG 265
FGEV+ + G GRGR+K++ GDE EGN SDRG+EDEEEEA+RK+RLGLN+KS
Sbjct: 61 LFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRKSN 120
Query: 266 DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEI 325
DDDDEEGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE D EERED LAPE+PAPPEI
Sbjct: 121 DDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPEI 180
Query: 326 KQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVAS 385
KQDEDDE+ E E EGGLSKSGKELKKLL + GL++SD +DDDD DD EE GT V S
Sbjct: 181 KQDEDDEENEEE-EGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGT-VTNS 240
Query: 386 KQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTET 445
KQK+ KEE ++P+KP PSG +GTP + K SKGKRKLN GD KPS+ KKVKTE
Sbjct: 241 KQKEAAKEEPVDNAPAKPAPSGPPRGTPPA-KPSKGKRKLNDGDSKKPSSSVQKKVKTEN 300
Query: 446 DSKST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTPVTT 505
D KS+ + + SKS A K PAS + S+ +GPVTE+EIRAVL ++ VTT
Sbjct: 301 DPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVTT 360
Query: 506 QDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK 538
QDLV++FKARL+++EDKNAFA ILR+IS+IQK G ++VVLR+
Sbjct: 361 QDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022159266.1 | 3.5e-291 | 99.63 | transcription initiation factor IIF subunit alpha [Momordica charantia] | [more] |
XP_004152016.1 | 7.6e-270 | 92.42 | transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >... | [more] |
XP_038888042.1 | 1.9e-268 | 92.42 | transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida] | [more] |
XP_016900419.1 | 5.4e-268 | 91.87 | PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alph... | [more] |
XP_022931161.1 | 9.6e-265 | 91.33 | transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita mos... | [more] |
Match Name | E-value | Identity | Description | |
Q9SU25 | 2.0e-185 | 68.49 | Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana OX=370... | [more] |
Q54WV4 | 1.2e-12 | 27.59 | General transcription factor IIF subunit 1 OS=Dictyostelium discoideum OX=44689 ... | [more] |
Q05913 | 6.1e-04 | 27.23 | General transcription factor IIF subunit 1 OS=Drosophila melanogaster OX=7227 GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E3E1 | 1.7e-291 | 99.63 | Transcription initiation factor IIF subunit alpha OS=Momordica charantia OX=3673... | [more] |
A0A0A0LCA6 | 3.7e-270 | 92.42 | Transcription initiation factor IIF subunit alpha OS=Cucumis sativus OX=3659 GN=... | [more] |
A0A1S4DWR2 | 2.6e-268 | 91.87 | Transcription initiation factor IIF subunit alpha OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A6J1ESX1 | 4.6e-265 | 91.33 | Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1K1N5 | 2.8e-262 | 90.28 | Transcription initiation factor IIF subunit alpha OS=Cucurbita maxima OX=3661 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT4G12610.1 | 3.1e-120 | 66.83 | transcription activators;DNA binding;RNA polymerase II transcription factors;cat... | [more] |
AT4G12610.2 | 3.1e-120 | 66.83 | transcription activators;DNA binding;RNA polymerase II transcription factors;cat... | [more] |