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MS017594 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGGTACCAGAAGGTCGAGAAGCCCAAACCCGAATCACCCATCAACGAAAACGAGATCCGAATCACAAGTCAAGGCGCCATTCGAAACTACATCACCTATGCCTCTACATTGCTCCAGGTATCATTTCCCACTTCAATATACTTCTTACTTCCTCCTTCCATCGTCTGATTGCATTGCGCAGTTTCCACCTGCTTATCGGAGTTGCGGCTGCTGATTTATTCTGCCAATGCTATGCATGTTCTATAGGATTGGTGTCAATCGATTTTATTGTTTAATTCGGTGCACTGTGTAATGAGTTTTAGTTCACCATGTAACTGACAGTAGATGATTCGTCATTCCTTGTTTTTCCTGTTTAATTGTAGTGTATGTTAATTCACTGAGTCTTGTAGGTATTTGGAAGAACTTCGTATTTTGTCACTTGTTGTAGCCTGTCTGATATCTTTTTGGGCCGCTGGTTAGAGACGTAATCTTTTTGGGATGTGCGTGCTGTTTGTCTGATGATAAGCAAATATATATATATGAAAAGAATGAGATATACCAAAAAATCCGAACGAGATAAGGAACACATTTCAATTGGAGTTTATAGAGGAAGGAGAATTGACTACGAACTTCATAGAACTAGAGCTTCACAGAGAAGTGACGAAAACATTATTCCAGAAGCTCTGTGGGTCATTGAAATACATTAAAGTCCAGAAGCTCTGTGGGTCCAGAAACATTAGTCCAGAGCTCCACTACTTGTTAAGTTCTGGATTCAATGGTCATATGCTTCTCTGTCTTATTTTCTTCATCTTTTTAAATATTCTCTCATACTTTCGATTCATCTCTGGAGTCAGGATGATACATCTGTTTTACCATTGTCTATTATGTATCTGCTCTTTTTTCCTTGATTATTCTGTTGTTCCTTTACCTACACTGATGTCTTACTGTTGTCTGTTCGAACTTCTTGTGATAGATTTGTGATGATGCATCTTCTTCTTCCCTTTCTTCTTCTCCTTCTTATATTCTTCTCATCTTCTTGATCTTTTTCAGGTACCTCTTGCTCTTGATTATGTGATGTGGTAGACTGCCTATAGTATTTTGGTTTATCAGAAAATTTATATGACATAGAATGTTGTTATTGCAACTTATTCAGGAAAAACGTGTCAGAGAGATTGTCTTAAAAGCAATGGGGCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGGTTTATTTCCTTTAGAACATGTGTGGCTTTGAATGCGGATATTGTGTATTATGAAATTGATTAGCCATGTATATCCGAAAACAGAAGAGAATATCACGGTTGCATCAAGAAACAGCAATCAGCTCAGTAAGCATCACTGATGTATGGGAACCCATTGAAGAAGGTCTTGTACCGTAAGTTTTCTTAATCTCTTGCATTCTAAGTTAATTGTATAAAGAGAATTAGAGAAATTATTAGTTTTTTGTTTTATTTACACTGTATATGCATCAGTCTCAACTTTGTTGCATGTTCTATGGGTTTGTATTATGTAGCTTAGTACTTTAGACGTATAGGTAATAACTTATAATGTGAAATACAGGGTGGAGATGACTCGTCACGTCTCAATGATTTCAATTACCTTGTCCAACCGAGAGCTAAATAAAAATTCTCCAGGG ATGGACAGGTACCAGAAGGTCGAGAAGCCCAAACCCGAATCACCCATCAACGAAAACGAGATCCGAATCACAAGTCAAGGCGCCATTCGAAACTACATCACCTATGCCTCTACATTGCTCCAGGAAAAACGTGTCAGAGAGATTGTCTTAAAAGCAATGGGGCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGAAGAGAATATCACGGTTGCATCAAGAAACAGCAATCAGCTCAGTAAGCATCACTGATGTATGGGAACCCATTGAAGAAGGTCTTGTACCGGTGGAGATGACTCGTCACGTCTCAATGATTTCAATTACCTTGTCCAACCGAGAGCTAAATAAAAATTCTCCAGGG ATGGACAGGTACCAGAAGGTCGAGAAGCCCAAACCCGAATCACCCATCAACGAAAACGAGATCCGAATCACAAGTCAAGGCGCCATTCGAAACTACATCACCTATGCCTCTACATTGCTCCAGGAAAAACGTGTCAGAGAGATTGTCTTAAAAGCAATGGGGCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGAAGAGAATATCACGGTTGCATCAAGAAACAGCAATCAGCTCAGTAAGCATCACTGATGTATGGGAACCCATTGAAGAAGGTCTTGTACCGGTGGAGATGACTCGTCACGTCTCAATGATTTCAATTACCTTGTCCAACCGAGAGCTAAATAAAAATTCTCCAGGG MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKNSPG Homology
BLAST of MS017594 vs. NCBI nr
Match: XP_038888002.1 (protein FAM98A-like isoform X3 [Benincasa hispida]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. NCBI nr
Match: XP_022159844.1 (ribonuclease P protein subunit p25-like protein [Momordica charantia]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. NCBI nr
Match: XP_031737653.1 (RNA-binding protein FUS isoform X1 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. NCBI nr
Match: XP_038888001.1 (protein FAM98A-like isoform X2 [Benincasa hispida]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. NCBI nr
Match: XP_031737654.1 (protein FAM98A isoform X2 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.4e-10 Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 0
BLAST of MS017594 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09 Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of MS017594 vs. ExPASy Swiss-Prot
Match: Q2KIR4 (Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.3e-09 Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 0
BLAST of MS017594 vs. ExPASy Swiss-Prot
Match: Q9BUL9 (Ribonuclease P protein subunit p25 OS=Homo sapiens OX=9606 GN=RPP25 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07 Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of MS017594 vs. ExPASy Swiss-Prot
Match: Q91WE3 (Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.1e-07 Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of MS017594 vs. ExPASy TrEMBL
Match: A0A5A7VGR8 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003370 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. ExPASy TrEMBL
Match: A0A0A0LE30 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G625120 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. ExPASy TrEMBL
Match: A0A6J1E3H2 (ribonuclease P protein subunit p25-like protein OS=Momordica charantia OX=3673 GN=LOC111026142 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. ExPASy TrEMBL
Match: A0A1S3BYB0 (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. ExPASy TrEMBL
Match: A0A1S3C001 (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS017594 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 190.3 bits (482), Expect = 9.4e-49 Identity = 98/123 (79.67%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of MS017594 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 157.5 bits (397), Expect = 6.7e-39 Identity = 80/123 (65.04%), Postives = 97/123 (78.86%), Query Frame = 0
BLAST of MS017594 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 154.1 bits (388), Expect = 7.5e-38 Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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