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MS017586 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAACAAGAATTTCCAGATCGCGAAGCTCTGAATTCCACAAACGCCAACATTCTCCTCCTCAATCTCTCCTAACTTCATCTCTAACGCTTCTCTTCATCTTCCTTTTCCTCTTCCTTTCCGCCGCCGCCGCCGTGCCGAGCAGCTCTTCCATGGCTTCCTCGGAGCCGCAGAGGCGTCTGATCGAACATTCCTCGAGCAATCCGCCGAGGAAACAGAGGTCGGACTCGGAATCGAAATCGCTCCGGCGGCGGAGAGACGATCGTCGATTTGAATCGGCGGCTCACGAAGTTCCGAGCGGTCCGAATCCGATATCGAAC ATGGCAGCAACAAGAATTTCCAGATCGCGAAGCTCTGAATTCCACAAACGCCAACATTCTCCTCCTCAATCTCTCCTAACTTCATCTCTAACGCTTCTCTTCATCTTCCTTTTCCTCTTCCTTTCCGCCGCCGCCGCCGTGCCGAGCAGCTCTTCCATGGCTTCCTCGGAGCCGCAGAGGCGTCTGATCGAACATTCCTCGAGCAATCCGCCGAGGAAACAGAGGTCGGACTCGGAATCGAAATCGCTCCGGCGGCGGAGAGACGATCGTCGATTTGAATCGGCGGCTCACGAAGTTCCGAGCGGTCCGAATCCGATATCGAAC ATGGCAGCAACAAGAATTTCCAGATCGCGAAGCTCTGAATTCCACAAACGCCAACATTCTCCTCCTCAATCTCTCCTAACTTCATCTCTAACGCTTCTCTTCATCTTCCTTTTCCTCTTCCTTTCCGCCGCCGCCGCCGTGCCGAGCAGCTCTTCCATGGCTTCCTCGGAGCCGCAGAGGCGTCTGATCGAACATTCCTCGAGCAATCCGCCGAGGAAACAGAGGTCGGACTCGGAATCGAAATCGCTCCGGCGGCGGAGAGACGATCGTCGATTTGAATCGGCGGCTCACGAAGTTCCGAGCGGTCCGAATCCGATATCGAAC MAATRISRSRSSEFHKRQHSPPQSLLTSSLTLLFIFLFLFLSAAAAVPSSSSMASSEPQRRLIEHSSSNPPRKQRSDSESKSLRRRRDDRRFESAAHEVPSGPNPISN Homology
BLAST of MS017586 vs. NCBI nr
Match: XP_022931103.1 (uncharacterized protein LOC111437389 [Cucurbita moschata]) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06 Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of MS017586 vs. NCBI nr
Match: KAA0068203.1 (hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa] >TYK21123.1 hypothetical protein E5676_scaffold392G001030 [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04 Identity = 38/69 (55.07%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of MS017586 vs. NCBI nr
Match: KAE8650847.1 (hypothetical protein Csa_002136 [Cucumis sativus]) HSP 1 Score: 55.8 bits (133), Expect = 2.6e-04 Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0
BLAST of MS017586 vs. NCBI nr
Match: THG13816.1 (hypothetical protein TEA_014294 [Camellia sinensis var. sinensis]) HSP 1 Score: 54.3 bits (129), Expect = 7.6e-04 Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0
BLAST of MS017586 vs. ExPASy TrEMBL
Match: A0A6J1EXF7 (uncharacterized protein LOC111437389 OS=Cucurbita moschata OX=3662 GN=LOC111437389 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.9e-07 Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of MS017586 vs. ExPASy TrEMBL
Match: A0A0A0LE33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G626150 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05 Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of MS017586 vs. ExPASy TrEMBL
Match: A0A5D3DC24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001030 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05 Identity = 38/69 (55.07%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of MS017586 vs. ExPASy TrEMBL
Match: A0A4S4EDK3 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_014294 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04 Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0
BLAST of MS017586 vs. TAIR 10
Match: AT3G24770.1 (CLAVATA3/ESR-RELATED 41 ) HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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