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MS017567 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGTAAGTTCATGTGGAACTATGCTTACTCTTTTTAACTGCCGAGCACTCTTATTTCTCACTACGATTACGATTGCATTACTCATTGACTAATTGTATACTTAGCTTTGCTTACAAAAATTGAGCATTCTTCATGTGCCAGTCAATTAGATATGCTGATTCCTATTTCTGTCAAATTTTTTTTCTATGAATTTTGTTGGAAACTATTAATATCTTCTTATTGAATTTGAATTGATACGCTGATTTTCATGGGCTTTCTTGTCTCAGATATTGATATATGGGATGGAAATCTTCTACTGCCGTTCTTAGGTTATGTTTGCTAACTCTGAATTATAATGTACATCGCAGGACATGCTAATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGTATTTTTGCTTTCTATATGTTGAATTTCTTCTGTTTATATTACCTTGCTATCATATCTTTGTTTAGAATGTCAATTTGAACTCTCTATCTCTCTGTGTGTCTAGCATGCATTATCGTGCCGTCACTGTGTTGCTTTATTTGTATAGAATGAATATTGAAATTTCTGGCGTGCTGTATGTATGTAGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTAGGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTTTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTAAAAACTACAAGTGGCTGTTGTTGTATTGTG ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGACATGCTAATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTAGGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTTTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTAAAAACTACAAGTGGCTGTTGTTGTATTGTG ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGACATGCTAATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTAGGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTTTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTAAAAACTACAAGTGGCTGTTGTTGTATTGTG MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGKRLVKTTSGCCCIV Homology
BLAST of MS017567 vs. NCBI nr
Match: XP_022156102.1 (uncharacterized protein LOC111023068 [Momordica charantia]) HSP 1 Score: 234.6 bits (597), Expect = 5.0e-58 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MS017567 vs. NCBI nr
Match: XP_038902583.1 (uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902585.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902586.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902588.1 uncharacterized protein LOC120089238 [Benincasa hispida]) HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51 Identity = 107/121 (88.43%), Postives = 115/121 (95.04%), Query Frame = 0
BLAST of MS017567 vs. NCBI nr
Match: XP_023533769.1 (uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205.7 bits (522), Expect = 2.5e-49 Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of MS017567 vs. NCBI nr
Match: XP_022995750.1 (uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharacterized protein LOC111491189 [Cucurbita maxima]) HSP 1 Score: 205.3 bits (521), Expect = 3.3e-49 Identity = 105/121 (86.78%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of MS017567 vs. NCBI nr
Match: KAG6606306.1 (hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 204.5 bits (519), Expect = 5.6e-49 Identity = 104/121 (85.95%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of MS017567 vs. ExPASy TrEMBL
Match: A0A6J1DR49 (uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023068 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.4e-58 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MS017567 vs. ExPASy TrEMBL
Match: A0A6J1K2S6 (uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49 Identity = 105/121 (86.78%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of MS017567 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.6e-49 Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of MS017567 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.6e-49 Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of MS017567 vs. ExPASy TrEMBL
Match: A0A6J1ESQ9 (uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC111437414 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 6.0e-49 Identity = 104/121 (85.95%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of MS017567 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component ) HSP 1 Score: 114.8 bits (286), Expect = 5.4e-26 Identity = 58/124 (46.77%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of MS017567 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component ) HSP 1 Score: 114.8 bits (286), Expect = 5.4e-26 Identity = 58/124 (46.77%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of MS017567 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component ) HSP 1 Score: 114.8 bits (286), Expect = 5.4e-26 Identity = 58/124 (46.77%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of MS017567 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-23 Identity = 57/125 (45.60%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of MS017567 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-23 Identity = 57/125 (45.60%), Postives = 87/125 (69.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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