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MS017562 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAATCGCCTTGACGACAGAGAGAACCCCTACGTTCAGTTTTCCTCTGCTTCTGCATCTCCAAATGGGAAAAGTTTGTCTTCTCCTGATTTCGCCCTTAATGTGTTTGTGATAATTCCTCTGTGGATTCTGATACTCTCTTTTCTGTAAATGTTTCAATAGATAAGATGTGGGAAGTGTTGGGTCGGTGCGGGAAGAGGTTGGAAGATTGTTCAAGGAAAGTAGAGGTTGCTGCAGACAGCGTCCGGCATCACTGTTAGTTCTTTCTTAAATCCAATTCTCTTTCCTGAATGTTTTGTTATCAGCAAGAATCTAATAGGAAACCCATTCCTTCAGTTTGATACTGACATAATATATATAGTTATCACCATCTCTTGCCAATATGGTTGGGTAAAGCTTTCAATGAATTAGTTTCAAATAATTGAAAGTGTTTCTTTCTGTAAATAAATGGCTTCAGGTTTCCCAATGATAACTTCAAAAGACAAATGCCATGTTGAAAGTTAAAACAAAACCGACTTTGTCTGGCAAAGCTTTACTCTGTTCCTTGGTCCTTACTTATTCAGAACCTAGATTTGGAGAGATTATTTAAGGGGTTGGAACAATATAGCTAGTGATTCTATATCGTTGAGTGTATGATTAGAGAATTTAAAACCTGTATTCCAAACTTGTATTGAACGGTTATTATAGAGGATACAAATTTAAAGCCTGCATATTGAATGATTTTTTCCTAAATTTGTCTTCCTTGTTTGATTTCTTCTTAAACTTATTAGCATCTAACCTGCAATATATGTATTTCCAACAGTGAGACTTAGTCCTAGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACGAAGTTACTTACAGAAGGTGGCTATGAAAAAGTCTTCCAGCAGACGTTTGGTTTCATTCATGGAGACAAATACGTGGATTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGGCCTGTAAATGGGACTCTATACATTTCCACAAAAAGAGTGGCCTTCTGTAGCGAATTCCCTCTTTGTTACTATCCATCTCCGGGCCAGCAACAGTGGATCCATTACAAGGTATGTCTAACCCATTATTCTTGGAGATATTATGTTCTGATGACTCTGAGATATTAGAATACAAAACTTAGCTGCTTAGAGTGTTTTCTGATAAGCAACTGGTAGAGTTCTATTTCGAAGGAAAGACGAGACAACTTAGGCATTTGAGAGGGAGACTCTGCACAAAATGATACTACTGGTTTAAAACTCACTGTTCGCATCCCCTTACATATATACTCATCTCAACTAACTCAGCCAGATCCGTCAGTAGACTTCGATTGATGAGAGATTCAACTAGAATCACCTACTAATAAAAGAAGCTGGCAGCGAGGCCCTGCTGCCTTCACTTCCAAAATTTACTCTATGCCAGCTAACCAATTCTCTCACCATAACTTGCGTGTGGATTTCCTGCACTTTATTCTTTGCATATGTAATATGTGGTAGGTGGTCTATTGAGCGTTCTAGTTAGTTACCCTGCTTATCTCTCTCAGTTTACAACAAAGAGTTAAAAGACTAGAGGAAGAGGTAGTTTGTGACTGGGTAGTAGCCAAGATTTGTCTAAGGATTTATTTCTCTAATCTTGCTATTATATGATTATTTTTTAGCAAGGGTTAGAGATTTGAACCTCCAACCTCAAGAGAGGGAGTAGATGCCTTAACCATTGAGATGTGTTCATGTTGGCTGCTTTTAACATGATTATTTTTTTATGCTTGTGAGCATTATAAGCATGGTGGAGCTGCAGTTTGGGAAGTAATTATATGAAGTGTTGCAACAGTTTGATTTTGACCCCAGTTAATCAAATTTCACATGGTTTCTCCAGTGAAATTCATGTTTTTTTATTTTATTTTAAAGAAACTATTTTATTGATAATAAAAGGGGGAGACCCAAGAGTGGGCTAAAAAAAGCTCCCCAATTAGACAAGCGAGAGGCGTAACCATATTGATGAAAGAGAGGAGAGAAAAAAAATAACAGTGAGATTCAAGTTTTTCCTCTTCCATTTCTTTAATGGTGAAAGAAACTAATTAAAGTCATTACCCATAATTATTAAATAACAGGGAGTCTTTGGATTCAAGAATAATTATGAAAAGAGCATGGAAGAAATTTAAATCATATAAGATAAATATAATTATCTAGATTCATAGTATAGATCTGAATTAGAAACCAATGAGGAGTAAATTAATGAGTTCATGATCTTTCTGAGGGAATATGAGATTGACAAAGCAGCATATATTGCAACCATGACTGTAATTCTTAGGGTTTTCCAGAATCTTCTTAGTGGGCCATACTTGTTTTCTTTTCTTCATCAACATGTAGGGTTAGGGATTTGAAACTCCGACCTTTTGGTCGAAGATATATGTTGATGGGCGACGGTCATACTTGTCTCTGGGAAGTATATGAGCCCATAACTGAATACCACTTAATATGGCCATTAATTAGATCAAAATAATTGTCCTTTATATTGTTACCTAATAAATAAGGCACCATCAGATCATTGGCATGGGTGGGAGCGGAGGAACTGACAATGTGATGCAATGTATAATCTCCCAGTATGATACTATTGATGGATTGTCAGTCCACACAAACTATAAGCTAATGTGCAATGACATGTTTTTGGTTTCAAGAATAATAAATGAAACCATTTAAAGAGTGAATGAAAATTCTGCAGCTTTATAAACCTCTTTCTTGGANTGATTATTGAAAAAGCAAGCTTGGAAAAATGTGTTCTTCCCCATTCAAACCACGGTGGTGAACCAAATATAGTAGAGTTTAATGTTTGTTCCACATTATTAGTCGAGGTTTTCTTAAGGACACTCGCGGATATGAAAAAAAGTGTTTTCTTCCCAATTTTGTCCTTTTATGACACGTCACTCGTCAGTACATAAAAATAAAACTCGGTTTCATGCAACTATCTCCAATCTCCAATCTCCAATATTCTATCTCCACTTTTGTGTTTGCATTATAGATATTGCTGAAGTCTTGTAGCCCAGATCCTCAACCCACTTTTACAACAATTTCCGGCTAAAAAAAGGCCACTCTGATCTTTAGAAATTCTCATAATGAGCTTGGTATCACTTGTCCACTCTGATCTTGAAAACTATGCTTGTGTTACTACTTGAATTTGCATTCTATCCCCTTCTCAAATGTCTGTCTGCATTCTTTTGAGTAGAACCAACTGCAATGATTAGCTAAACGAATCAAGTTTCGTTGAGTTTCTTGTCCTTTATCCATCTTTTTCACTCGAGTTTTCAACTATGAATCTCCTGTTAATTTCTTTACTTGGGTTCTTTTCCATGAATGTGATGAATATGTAGGTGGTGGTAGCCGTTGATCAGTTGGGGACAATCAATACTTCTTCAAACCATCTGGACCCCTCACAAAAGTACATCCAAGTAATCACGAGGGACAGTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACCGACGCGTTCCAGCAATCTCGTGCC ATGAGCAATCGCCTTGACGACAGAGAGAACCCCTACGTTCAGTTTTCCTCTGCTTCTGCATCTCCAAATGGGAAAAATAAGATGTGGGAAGTGTTGGGTCGGTGCGGGAAGAGGTTGGAAGATTGTTCAAGGAAAGTAGAGGTTGCTGCAGACAGCGTCCGGCATCACTTGAGACTTAGTCCTAGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACGAAGTTACTTACAGAAGGTGGCTATGAAAAAGTCTTCCAGCAGACGTTTGGTTTCATTCATGGAGACAAATACGTGGATTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGGCCTGTAAATGGGACTCTATACATTTCCACAAAAAGAGTGGCCTTCTGTAGCGAATTCCCTCTTTGTTACTATCCATCTCCGGGCCAGCAACAGTGGATCCATTACAAGGTGGTGGTAGCCGTTGATCAGTTGGGGACAATCAATACTTCTTCAAACCATCTGGACCCCTCACAAAAGTACATCCAAGTAATCACGAGGGACAGTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACCGACGCGTTCCAGCAATCTCGTGCC ATGAGCAATCGCCTTGACGACAGAGAGAACCCCTACGTTCAGTTTTCCTCTGCTTCTGCATCTCCAAATGGGAAAAATAAGATGTGGGAAGTGTTGGGTCGGTGCGGGAAGAGGTTGGAAGATTGTTCAAGGAAAGTAGAGGTTGCTGCAGACAGCGTCCGGCATCACTTGAGACTTAGTCCTAGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACGAAGTTACTTACAGAAGGTGGCTATGAAAAAGTCTTCCAGCAGACGTTTGGTTTCATTCATGGAGACAAATACGTGGATTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGGCCTGTAAATGGGACTCTATACATTTCCACAAAAAGAGTGGCCTTCTGTAGCGAATTCCCTCTTTGTTACTATCCATCTCCGGGCCAGCAACAGTGGATCCATTACAAGGTGGTGGTAGCCGTTGATCAGTTGGGGACAATCAATACTTCTTCAAACCATCTGGACCCCTCACAAAAGTACATCCAAGTAATCACGAGGGACAGTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACCGACGCGTTCCAGCAATCTCGTGCC MSNRLDDRENPYVQFSSASASPNGKNKMWEVLGRCGKRLEDCSRKVEVAADSVRHHLRLSPSVTDAAMARLHQGTKLLTEGGYEKVFQQTFGFIHGDKYVDSFACYLSTSSGPVNGTLYISTKRVAFCSEFPLCYYPSPGQQQWIHYKVVVAVDQLGTINTSSNHLDPSQKYIQVITRDSHEFWFMGFISYNKAVKTLTDAFQQSRA Homology
BLAST of MS017562 vs. NCBI nr
Match: XP_022159858.1 (GEM-like protein 2 [Momordica charantia]) HSP 1 Score: 427.6 bits (1098), Expect = 6.3e-116 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of MS017562 vs. NCBI nr
Match: XP_038887655.1 (GEM-like protein 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 351.3 bits (900), Expect = 5.7e-93 Identity = 168/207 (81.16%), Postives = 184/207 (88.89%), Query Frame = 0
BLAST of MS017562 vs. NCBI nr
Match: XP_038887653.1 (GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like protein 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 347.8 bits (891), Expect = 6.4e-92 Identity = 168/208 (80.77%), Postives = 185/208 (88.94%), Query Frame = 0
BLAST of MS017562 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 9.2e-91 Identity = 165/207 (79.71%), Postives = 182/207 (87.92%), Query Frame = 0
BLAST of MS017562 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 329.3 bits (843), Expect = 2.3e-86 Identity = 165/237 (69.62%), Postives = 183/237 (77.22%), Query Frame = 0
BLAST of MS017562 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.8e-50 Identity = 95/201 (47.26%), Postives = 140/201 (69.65%), Query Frame = 0
BLAST of MS017562 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-47 Identity = 95/198 (47.98%), Postives = 135/198 (68.18%), Query Frame = 0
BLAST of MS017562 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46 Identity = 94/194 (48.45%), Postives = 133/194 (68.56%), Query Frame = 0
BLAST of MS017562 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 153.7 bits (387), Expect = 2.3e-36 Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 0
BLAST of MS017562 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.1e-36 Identity = 76/188 (40.43%), Postives = 113/188 (60.11%), Query Frame = 0
BLAST of MS017562 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 3.1e-116 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of MS017562 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 4.4e-91 Identity = 165/207 (79.71%), Postives = 182/207 (87.92%), Query Frame = 0
BLAST of MS017562 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86 Identity = 165/237 (69.62%), Postives = 183/237 (77.22%), Query Frame = 0
BLAST of MS017562 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 3.2e-81 Identity = 146/181 (80.66%), Postives = 162/181 (89.50%), Query Frame = 0
BLAST of MS017562 vs. ExPASy TrEMBL
Match: A0A067K7X8 (GRAM domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_14146 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67 Identity = 124/215 (57.67%), Postives = 170/215 (79.07%), Query Frame = 0
BLAST of MS017562 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 199.9 bits (507), Expect = 2.0e-51 Identity = 95/201 (47.26%), Postives = 140/201 (69.65%), Query Frame = 0
BLAST of MS017562 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 190.3 bits (482), Expect = 1.6e-48 Identity = 95/198 (47.98%), Postives = 135/198 (68.18%), Query Frame = 0
BLAST of MS017562 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 188.7 bits (478), Expect = 4.6e-48 Identity = 93/201 (46.27%), Postives = 137/201 (68.16%), Query Frame = 0
BLAST of MS017562 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 188.0 bits (476), Expect = 7.8e-48 Identity = 94/194 (48.45%), Postives = 133/194 (68.56%), Query Frame = 0
BLAST of MS017562 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 152.5 bits (384), Expect = 3.6e-37 Identity = 76/188 (40.43%), Postives = 113/188 (60.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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