![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS017561 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATAAGATCCGGGGAGCGTTGGGTCGCTGCGGGAAGATGTTGGAAGAGTATGGTAAAATTGCAGAGGAAGCTGCGGACGACGTCTTGCATCACAGTAAGTTTTTCCCTCGATCAATTTTTCTTTTCGATTTATTCATTTGCTATCTGCAAGAAGATTATTTCTTCTTTCATGCCTAATATATCGTGCAGTAGTTTTCTTTGTGTTCAAGTTTTCATAACTAGCCCTTTTTCTTGCATTTGATTTGGTAGAGCTTTGAATAAATCGATTCTAATATTGAAATAGTTCATGCTGGATTGGTTTTTTTAAGTGAACTTGGCGATACCCAACATGTTAAATTGGCCATGTTTATAATAACGGATAATATCTCTAGATAGTGGGGGCATAGGTTAGAACTGAACTGACAAACATGTAAAATGAGATTGGTTTTTTTTTTAGGGCTGCTAATGTTCTATCTCGTTTTCTGCCCTTGTCTAGAATAATGAAGCCTAGAATGTTGCCTCTTTCTTGCTTGATTTGATAACTCTTAATATGCCGTACCTGTTTTGACATCAGTAAAAGTCAGCCCGAGCATTGGCGATGCAGCAAAGGCTAGGCTTATTCAAGGGACGAAATTAGTCACCGAAGGAGGCCCAGAAAAATTATTCCAGCATACATTTGGTGTTATTCCTGGAGACAAATATTTGCATTCATATGCTTGCTATTTGTCAACTTCTTCTGGGCCTGTGAATGGGACTCTTTACATATCCACCAAAAGAGTGGCTTTTGGTAGTGAATCACCTCTCTGTTACTCTTCATCTCCTGGTCAGCCAGAGTGGATGTATTACAAGGTATGTTCGACCCGTTACTATTTCTAATATATCTTAAATCAAAATATTTGTTAATCTTATATTAGTATTTAGTTATTGTAGCCTTTCACATTTTTTACCATTGACTTTAGAAAGCCATTCCTTCTGGCTTAGTTATTGTAGCCTGTATTATAAGCATGTGAATGTGTGTTCTAGGACATTGTGAATGGTAATATGAGTGTGACAACAACTTAACATTAATTGTTTATTTTCATTTTGACAAGAGCACAATTGGCTATATAGGATAGGAACCCCGAATCCTTGAGAAAAAACATTGACCTCAGCTGTTACTGTTAAGATAAATTTCACGTTTTTCCCATGAGATTCACGTTGACTCTCTCTCTACAGTGGACTACCAGGTGAAATTTGTTTATCCATATTAGTGGACTGAATCAGTTCTCCTTTACTAAATACTTCTTTCATTGGAGATTCAAAATTTTTTTGTAAGGATGGTGAAAATTTGACTTCTATTTATAATCTTTCAATTATAAAAAATTAGGGGCAAATTAGTAGGAAAGTTTCAAAACCTTATTCTTTTTATATGATTTCTTGAGTTTAAGATAAACTAAAGGAGGTAATTGCCCTCTCTCCTTCTTTGCTCCGACCTTGAGGGGTAGTAGGGAAAGGAAAACTAGGCCATGTGGGGAGTTATAATGGTAAGATTTTTAAGTACTTGTTGATCATGGAAACATTTTAGGAAATAAGCAGGAGGAACAAATTTTATCACAGCAAAAGGCCTCCCCAGTCTTGCTTAGCTACTCCAGGAACAAGACTGTTCCAGATAATATTGCACATGTTAGAATTTGATTTATCCTACATTTCTTCTCAGGCCTCTGAACACTGAACTTTAACTGATGGAATGCTGGCAAAATGAATCATTAGCTTAGCTATGTGCCTTTTTAGTATTTTACTTTGACTGTGGAACTTCTGCTGTTTTCAAGTTGGGCCTTCTCTTATATGTATATCAATTTGTAGGTGGTGATAGAGCTCAACCAGGTGGCAATGATCAACCCGTCTCCAAACCTTCTCAACCCATCAGAAAAAGACATCCACCTAGTCACGAGGGACGGTCACGAATTCTGGTTCATGGGATTTATATGTTTCAGCCGGGCCTTAAAGAGTTTAAACGAGGCGTTAAAGCATGCCCATGCC GATAAGATCCGGGGAGCGTTGGGTCGCTGCGGGAAGATGTTGGAAGAGTATGGTAAAATTGCAGAGGAAGCTGCGGACGACGTCTTGCATCACATAAAAGTCAGCCCGAGCATTGGCGATGCAGCAAAGGCTAGGCTTATTCAAGGGACGAAATTAGTCACCGAAGGAGGCCCAGAAAAATTATTCCAGCATACATTTGGTGTTATTCCTGGAGACAAATATTTGCATTCATATGCTTGCTATTTGTCAACTTCTTCTGGGCCTGTGAATGGGACTCTTTACATATCCACCAAAAGAGTGGCTTTTGGTAGTGAATCACCTCTCTGTTACTCTTCATCTCCTGGTCAGCCAGAGTGGATGTATTACAAGGTGGTGATAGAGCTCAACCAGGTGGCAATGATCAACCCGTCTCCAAACCTTCTCAACCCATCAGAAAAAGACATCCACCTAGTCACGAGGGACGGTCACGAATTCTGGTTCATGGGATTTATATGTTTCAGCCGGGCCTTAAAGAGTTTAAACGAGGCGTTAAAGCATGCCCATGCC GATAAGATCCGGGGAGCGTTGGGTCGCTGCGGGAAGATGTTGGAAGAGTATGGTAAAATTGCAGAGGAAGCTGCGGACGACGTCTTGCATCACATAAAAGTCAGCCCGAGCATTGGCGATGCAGCAAAGGCTAGGCTTATTCAAGGGACGAAATTAGTCACCGAAGGAGGCCCAGAAAAATTATTCCAGCATACATTTGGTGTTATTCCTGGAGACAAATATTTGCATTCATATGCTTGCTATTTGTCAACTTCTTCTGGGCCTGTGAATGGGACTCTTTACATATCCACCAAAAGAGTGGCTTTTGGTAGTGAATCACCTCTCTGTTACTCTTCATCTCCTGGTCAGCCAGAGTGGATGTATTACAAGGTGGTGATAGAGCTCAACCAGGTGGCAATGATCAACCCGTCTCCAAACCTTCTCAACCCATCAGAAAAAGACATCCACCTAGTCACGAGGGACGGTCACGAATTCTGGTTCATGGGATTTATATGTTTCAGCCGGGCCTTAAAGAGTTTAAACGAGGCGTTAAAGCATGCCCATGCC DKIRGALGRCGKMLEEYGKIAEEAADDVLHHIKVSPSIGDAAKARLIQGTKLVTEGGPEKLFQHTFGVIPGDKYLHSYACYLSTSSGPVNGTLYISTKRVAFGSESPLCYSSSPGQPEWMYYKVVIELNQVAMINPSPNLLNPSEKDIHLVTRDGHEFWFMGFICFSRALKSLNEALKHAHA Homology
BLAST of MS017561 vs. NCBI nr
Match: XP_022156241.1 (GEM-like protein 1 [Momordica charantia]) HSP 1 Score: 380.2 bits (975), Expect = 1.0e-101 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of MS017561 vs. NCBI nr
Match: XP_023553639.1 (GEM-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312.0 bits (798), Expect = 3.4e-81 Identity = 145/182 (79.67%), Postives = 164/182 (90.11%), Query Frame = 0
BLAST of MS017561 vs. NCBI nr
Match: XP_022967332.1 (GEM-like protein 2 [Cucurbita maxima]) HSP 1 Score: 311.2 bits (796), Expect = 5.8e-81 Identity = 144/182 (79.12%), Postives = 164/182 (90.11%), Query Frame = 0
BLAST of MS017561 vs. NCBI nr
Match: XP_022963576.1 (GEM-like protein 1 [Cucurbita moschata]) HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80 Identity = 144/182 (79.12%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of MS017561 vs. NCBI nr
Match: KAG6571599.1 (GEM-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 309.7 bits (792), Expect = 1.7e-80 Identity = 143/182 (78.57%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of MS017561 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.2e-46 Identity = 85/178 (47.75%), Postives = 123/178 (69.10%), Query Frame = 0
BLAST of MS017561 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.1e-45 Identity = 89/178 (50.00%), Postives = 122/178 (68.54%), Query Frame = 0
BLAST of MS017561 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44 Identity = 83/178 (46.63%), Postives = 123/178 (69.10%), Query Frame = 0
BLAST of MS017561 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 7.2e-34 Identity = 68/161 (42.24%), Postives = 99/161 (61.49%), Query Frame = 0
BLAST of MS017561 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 134.8 bits (338), Expect = 9.7e-31 Identity = 70/178 (39.33%), Postives = 107/178 (60.11%), Query Frame = 0
BLAST of MS017561 vs. ExPASy TrEMBL
Match: A0A6J1DUB7 (GEM-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111023171 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 4.9e-102 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of MS017561 vs. ExPASy TrEMBL
Match: A0A6J1HQI2 (GEM-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111466886 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81 Identity = 144/182 (79.12%), Postives = 164/182 (90.11%), Query Frame = 0
BLAST of MS017561 vs. ExPASy TrEMBL
Match: A0A6J1HGG7 (GEM-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111463872 PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.2e-81 Identity = 144/182 (79.12%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of MS017561 vs. ExPASy TrEMBL
Match: A0A1S3CBY7 (GEM-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103499227 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78 Identity = 141/179 (78.77%), Postives = 161/179 (89.94%), Query Frame = 0
BLAST of MS017561 vs. ExPASy TrEMBL
Match: A0A0A0LCF9 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G634340 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76 Identity = 138/179 (77.09%), Postives = 160/179 (89.39%), Query Frame = 0
BLAST of MS017561 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47 Identity = 85/178 (47.75%), Postives = 123/178 (69.10%), Query Frame = 0
BLAST of MS017561 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 184.5 bits (467), Expect = 7.6e-47 Identity = 89/178 (50.00%), Postives = 122/178 (68.54%), Query Frame = 0
BLAST of MS017561 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 181.0 bits (458), Expect = 8.4e-46 Identity = 83/178 (46.63%), Postives = 123/178 (69.10%), Query Frame = 0
BLAST of MS017561 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 177.9 bits (450), Expect = 7.1e-45 Identity = 89/178 (50.00%), Postives = 121/178 (67.98%), Query Frame = 0
BLAST of MS017561 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 145.2 bits (365), Expect = 5.1e-35 Identity = 68/161 (42.24%), Postives = 99/161 (61.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|