Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATTGAGGCTGTGAAGCGCCATTACAATCATCTCAAAACCATCAATTCGGAGTTGAAAGCGAAAAAGCAAAAGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCCTTGGAACTCTGCAGTCCCCAATTTCATTATCTTTAGGTTTTTGTTTTTCTTTTTGCATCATAAATCAATCTAATTACATTTTCTGTTCTTCTTCAGATGATGCCGAGTTTCTACAACGGTTCTCCGCAACCAGAAACAGGAAGTTCAAGTTCCGCCATGGAAATCGCTCAACTCACTGTCAAATCCTCCTCTCCAACTCTCGAGAATCATCATCATCAACATCAACAACAACAAAAACAGAATCATAATCATCATCGTCATTATCCGCAACCGTCCATCAAGAATCAGACGCCAGAACCGAGCCAGAGTTTCCAAATCCCTCCGTACGATACCTCATTGGGCCCAATCGGAATCCCCGACTTGAACATCTCTCTCGAAGAATTCGCTCAGAGGAATTACTCCAAAATCAAGGCCGCTCAAGCGAGACAGAGAAGGATTCGGATCTGCAAGACCAAGAACTCTAACGCAGCTATCAAATTGCAGAGC
mRNA sequence
GAAATTGAGGCTGTGAAGCGCCATTACAATCATCTCAAAACCATCAATTCGGAGTTGAAAGCGAAAAAGCAAAAGATGATGCCGAGTTTCTACAACGGTTCTCCGCAACCAGAAACAGGAAGTTCAAGTTCCGCCATGGAAATCGCTCAACTCACTGTCAAATCCTCCTCTCCAACTCTCGAGAATCATCATCATCAACATCAACAACAACAAAAACAGAATCATAATCATCATCGTCATTATCCGCAACCGTCCATCAAGAATCAGACGCCAGAACCGAGCCAGAGTTTCCAAATCCCTCCGTACGATACCTCATTGGGCCCAATCGGAATCCCCGACTTGAACATCTCTCTCGAAGAATTCGCTCAGAGGAATTACTCCAAAATCAAGGCCGCTCAAGCGAGACAGAGAAGGATTCGGATCTGCAAGACCAAGAACTCTAACGCAGCTATCAAATTGCAGAGC
Coding sequence (CDS)
GAAATTGAGGCTGTGAAGCGCCATTACAATCATCTCAAAACCATCAATTCGGAGTTGAAAGCGAAAAAGCAAAAGATGATGCCGAGTTTCTACAACGGTTCTCCGCAACCAGAAACAGGAAGTTCAAGTTCCGCCATGGAAATCGCTCAACTCACTGTCAAATCCTCCTCTCCAACTCTCGAGAATCATCATCATCAACATCAACAACAACAAAAACAGAATCATAATCATCATCGTCATTATCCGCAACCGTCCATCAAGAATCAGACGCCAGAACCGAGCCAGAGTTTCCAAATCCCTCCGTACGATACCTCATTGGGCCCAATCGGAATCCCCGACTTGAACATCTCTCTCGAAGAATTCGCTCAGAGGAATTACTCCAAAATCAAGGCCGCTCAAGCGAGACAGAGAAGGATTCGGATCTGCAAGACCAAGAACTCTAACGCAGCTATCAAATTGCAGAGC
Protein sequence
EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS
Homology
BLAST of MS016899 vs. NCBI nr
Match:
XP_022144188.1 (uncharacterized protein LOC111013942 [Momordica charantia])
HSP 1 Score: 247.7 bits (631), Expect = 6.7e-62
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0
Query: 26 MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPS 85
MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHN HRHYPQPS
Sbjct: 1 MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNRHRHYPQPS 60
Query: 86 IKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK 145
IKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK
Sbjct: 61 IKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK 120
Query: 146 NSNAAIKLQS 156
NSNAAIKLQS
Sbjct: 121 NSNAAIKLQS 130
BLAST of MS016899 vs. NCBI nr
Match:
XP_011649664.1 (myocardin-related transcription factor A [Cucumis sativus] >KGN62681.1 hypothetical protein Csa_022065 [Cucumis sativus])
HSP 1 Score: 125.6 bits (314), Expect = 3.8e-25
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPT 60
+IEA+KRH+ +LKTINSELKAKKQ+++ F N S P+ G+S+S AMEIA+LTVKSS
Sbjct: 146 DIEAMKRHFINLKTINSELKAKKQEILGGFSNLSVNPKFGTSTSVAMEIAKLTVKSSDSN 205
Query: 61 LENHHHQHQQQQKQNHNHHRHYPQPSIKNQT---PEPSQSFQ--------IPPYDTSLGP 120
+EN+H + +PS+KNQT E S S Q IP YD SLGP
Sbjct: 206 VENNHDE---------------CEPSMKNQTVPVAEQSNSIQNYQIPIGGIPLYDPSLGP 265
Query: 121 IGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK----NSNAAIKLQS 156
+GIPDLN+SLE+ +NY+K AA+ARQ RI+I K K N+N A KLQS
Sbjct: 266 MGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQS 301
BLAST of MS016899 vs. NCBI nr
Match:
XP_008444813.1 (PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo] >KAA0065161.1 uncharacterized protein E6C27_scaffold82G004970 [Cucumis melo var. makuwa])
HSP 1 Score: 123.2 bits (308), Expect = 1.9e-24
Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPT 60
+IEA+KRH+ +LKTINSELKAKKQ+++ F N S PE G+SSS AME+A+LTVKSS
Sbjct: 146 DIEAMKRHFINLKTINSELKAKKQEILDGFGNVSVNPEIGTSSSVAMEVAKLTVKSSYSN 205
Query: 61 LENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEPSQSFQ-----IPPYDTSLGP 120
+EN+H + +PS+KNQT ++++Q IP YD SLGP
Sbjct: 206 VENNHDE---------------CEPSMKNQTVPTAEQGNSNRNYQIPIGGIPLYDPSLGP 265
Query: 121 IGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS 156
+GIPDLN+SLE+ ++Y+K AA+ARQ RI+I K K N+N A KLQS
Sbjct: 266 MGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNKNNNNNGAPKLQS 299
BLAST of MS016899 vs. NCBI nr
Match:
XP_022951578.1 (uncharacterized protein LOC111454352 [Cucurbita moschata])
HSP 1 Score: 116.3 bits (290), Expect = 2.3e-22
Identity = 84/165 (50.91%), Postives = 103/165 (62.42%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSS 60
E EA+K+HYNHLK INSELKAKKQ+M+ S N S PE G+SSSAME+ + LTV+SS
Sbjct: 128 EFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTVESS 187
Query: 61 SPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPP-----YD-TSLGPIG 120
+ H P P + Q+ SQ+FQIP YD +SL P+G
Sbjct: 188 T----------------------HQPDP-MAEQSNNGSQNFQIPIGGIPFYDPSSLSPMG 247
Query: 121 IPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS 156
IPDLNISLEE QRNYS+ AA+AR+ RI+ICK KN N KLQ+
Sbjct: 248 IPDLNISLEEINQRNYSRFMAARARKNRIQICKNKN-NGVTKLQT 268
BLAST of MS016899 vs. NCBI nr
Match:
KAG6585540.1 (hypothetical protein SDJN03_18273, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 115.9 bits (289), Expect = 3.0e-22
Identity = 84/165 (50.91%), Postives = 103/165 (62.42%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSS 60
E EA+K+HYNHLK INSELKAKKQ+M+ S N S PE G+SSSAME+ + LTV+SS
Sbjct: 123 EFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTVESS 182
Query: 61 SPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPP-----YD-TSLGPIG 120
+ H P P + Q+ SQ+FQIP YD +SL P+G
Sbjct: 183 T----------------------HQPAP-MAEQSNNGSQNFQIPIGGIPFYDPSSLSPMG 242
Query: 121 IPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS 156
IPDLNISLEE QRNYS+ AA+AR+ RI+ICK KN N KLQ+
Sbjct: 243 IPDLNISLEEINQRNYSRFMAARARKNRIQICKNKN-NGVTKLQT 263
BLAST of MS016899 vs. ExPASy TrEMBL
Match:
A0A6J1CSM9 (uncharacterized protein LOC111013942 OS=Momordica charantia OX=3673 GN=LOC111013942 PE=4 SV=1)
HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0
Query: 26 MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPS 85
MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHN HRHYPQPS
Sbjct: 1 MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNRHRHYPQPS 60
Query: 86 IKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK 145
IKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK
Sbjct: 61 IKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK 120
Query: 146 NSNAAIKLQS 156
NSNAAIKLQS
Sbjct: 121 NSNAAIKLQS 130
BLAST of MS016899 vs. ExPASy TrEMBL
Match:
A0A0A0LRP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368820 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.9e-25
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPT 60
+IEA+KRH+ +LKTINSELKAKKQ+++ F N S P+ G+S+S AMEIA+LTVKSS
Sbjct: 146 DIEAMKRHFINLKTINSELKAKKQEILGGFSNLSVNPKFGTSTSVAMEIAKLTVKSSDSN 205
Query: 61 LENHHHQHQQQQKQNHNHHRHYPQPSIKNQT---PEPSQSFQ--------IPPYDTSLGP 120
+EN+H + +PS+KNQT E S S Q IP YD SLGP
Sbjct: 206 VENNHDE---------------CEPSMKNQTVPVAEQSNSIQNYQIPIGGIPLYDPSLGP 265
Query: 121 IGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK----NSNAAIKLQS 156
+GIPDLN+SLE+ +NY+K AA+ARQ RI+I K K N+N A KLQS
Sbjct: 266 MGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQS 301
BLAST of MS016899 vs. ExPASy TrEMBL
Match:
A0A5A7VHE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004970 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 9.2e-25
Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPT 60
+IEA+KRH+ +LKTINSELKAKKQ+++ F N S PE G+SSS AME+A+LTVKSS
Sbjct: 146 DIEAMKRHFINLKTINSELKAKKQEILDGFGNVSVNPEIGTSSSVAMEVAKLTVKSSYSN 205
Query: 61 LENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEPSQSFQ-----IPPYDTSLGP 120
+EN+H + +PS+KNQT ++++Q IP YD SLGP
Sbjct: 206 VENNHDE---------------CEPSMKNQTVPTAEQGNSNRNYQIPIGGIPLYDPSLGP 265
Query: 121 IGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS 156
+GIPDLN+SLE+ ++Y+K AA+ARQ RI+I K K N+N A KLQS
Sbjct: 266 MGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNKNNNNNGAPKLQS 299
BLAST of MS016899 vs. ExPASy TrEMBL
Match:
A0A1S3BAR4 (uncharacterized protein LOC103488049 OS=Cucumis melo OX=3656 GN=LOC103488049 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 9.2e-25
Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPT 60
+IEA+KRH+ +LKTINSELKAKKQ+++ F N S PE G+SSS AME+A+LTVKSS
Sbjct: 146 DIEAMKRHFINLKTINSELKAKKQEILDGFGNVSVNPEIGTSSSVAMEVAKLTVKSSYSN 205
Query: 61 LENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEPSQSFQ-----IPPYDTSLGP 120
+EN+H + +PS+KNQT ++++Q IP YD SLGP
Sbjct: 206 VENNHDE---------------CEPSMKNQTVPTAEQGNSNRNYQIPIGGIPLYDPSLGP 265
Query: 121 IGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS 156
+GIPDLN+SLE+ ++Y+K AA+ARQ RI+I K K N+N A KLQS
Sbjct: 266 MGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNKNNNNNGAPKLQS 299
BLAST of MS016899 vs. ExPASy TrEMBL
Match:
A0A6J1GI34 (uncharacterized protein LOC111454352 OS=Cucurbita moschata OX=3662 GN=LOC111454352 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 84/165 (50.91%), Postives = 103/165 (62.42%), Query Frame = 0
Query: 1 EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSS 60
E EA+K+HYNHLK INSELKAKKQ+M+ S N S PE G+SSSAME+ + LTV+SS
Sbjct: 128 EFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTVESS 187
Query: 61 SPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPP-----YD-TSLGPIG 120
+ H P P + Q+ SQ+FQIP YD +SL P+G
Sbjct: 188 T----------------------HQPDP-MAEQSNNGSQNFQIPIGGIPFYDPSSLSPMG 247
Query: 121 IPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS 156
IPDLNISLEE QRNYS+ AA+AR+ RI+ICK KN N KLQ+
Sbjct: 248 IPDLNISLEEINQRNYSRFMAARARKNRIQICKNKN-NGVTKLQT 268
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144188.1 | 6.7e-62 | 99.23 | uncharacterized protein LOC111013942 [Momordica charantia] | [more] |
XP_011649664.1 | 3.8e-25 | 50.88 | myocardin-related transcription factor A [Cucumis sativus] >KGN62681.1 hypotheti... | [more] |
XP_008444813.1 | 1.9e-24 | 49.70 | PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo] >KAA0065161.1 unc... | [more] |
XP_022951578.1 | 2.3e-22 | 50.91 | uncharacterized protein LOC111454352 [Cucurbita moschata] | [more] |
KAG6585540.1 | 3.0e-22 | 50.91 | hypothetical protein SDJN03_18273, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CSM9 | 3.2e-62 | 99.23 | uncharacterized protein LOC111013942 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A0A0LRP1 | 1.9e-25 | 50.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368820 PE=4 SV=1 | [more] |
A0A5A7VHE1 | 9.2e-25 | 49.70 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BAR4 | 9.2e-25 | 49.70 | uncharacterized protein LOC103488049 OS=Cucumis melo OX=3656 GN=LOC103488049 PE=... | [more] |
A0A6J1GI34 | 1.1e-22 | 50.91 | uncharacterized protein LOC111454352 OS=Cucurbita moschata OX=3662 GN=LOC1114543... | [more] |
Match Name | E-value | Identity | Description | |