MS016837 (gene) Bitter gourd (TR) v1

Overview
NameMS016837
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCBS domain-containing protein CBSX3, mitochondrial-like
Locationscaffold9_1: 356514 .. 358109 (+)
RNA-Seq ExpressionMS016837
SyntenyMS016837
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGGGATGGTGAGAGCAGCACGATGGTGGCGGGAGGCGGTGAAGACGGCGATCTGGCAGAGGACGTGCCGGAGAGAAACGAATGGAACGGAGAAGGTTATTGTGGAAGGAGGTTGGAAAGGTTTGGAGAATATTAGCGTCGCGGAGATCATAGTTTCGAGAAAGCGAGGGGGAGACGAAAGTATTGGCTCCTGGTTGTGGTGCCGAGAGGACGATGCCGCCATTGATGCTGTGCAAAATGTAGCGAGATCAGTTTCGTTGGTTAGGGTTTCAGATTTGGAAAGATGAGGATTTTGATTGTTTGTTTGTTTGTTTGTTGCAGATGGCTAGAAACAACAGTGGATCGTTGGTGGTGATGAAGCCTGAAGGCCAACACATTGCTGGAATCGTCACAGAACGAGGTAATTCAATTCAAACTTCATGATCGCGGATTAAACATCAACATCAATTACTCATTCAAATCTGATCAACTATAAACCCAAACCCAATGTAATTTGAAATTATTTTAAATAATTTCAATTACACTCCTATCAAACATGAATACAAAGTTGTAAAATAGTAGTAGACTGACTTCCGAAAATAATAAAAAAACCGATAACAACTAGACAATGGACCAAAACGAACATAACTCAACGGTAATTGTAGTAGGGTCAAACGATTGACCCGTGAATAGTCGAGTTGCACACAAACTGACCCGGACACACGAATATAAAAAAAAAAATCATTTATTTTTAGCATAAAATTCATCGAGAACATATTTGAATCAATTTTAAAGGGCAATATTAGAGGTGAACTTTTAAAACCATCCAGATATAAAAATTTGGTTGGAGCATTTTGAATAATTTAGCCCCAAAAAATTACATTACAGAACTCATTGTCACACCAAAGAATAACTTGCCATGTCAGGATAAACATCCTAATTACAAAAATTTTAAATATAGGAAACTAATTACTGAAACGGTTAAAAGCAAATGGACTAAAAATGAAATTCAACCAAAAATTTAATGAGCAAATATATATGGAGAAAGGGAGTTGTTTCTCATTTGTGCTCCAATCCATACATATTGTCTTGGTAATGGCTGTTTTCTGATGGATCCTAAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATGTACACAAAAGTTGGGGAAATAATGACTCGTGAGGTAATTTTTCTGTCTTCTTTCAGCTACAAAACCAGATTACAAATCGACAGTTTCTCACTCATACATTTTTATTTTTCATGAACAGGACAAACTAGTAACTGTAACGTCTGACACAAACATCCTTAAAGCAATGCAGCTTATGACGGGTAAATACTAAATACACTGTCATTTATATTCTTAAATTACCATAAAAATGGGAGTCAGCTCCTTCTCCAGCTGCATCACACAGCCATCTAAGAGGAGAATAAACCAGTTGAAGCTCTTGGCATTTGCAGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAAATAGTTGGCGTGATTTCTATAGTAGATGTTGTCAGAGCTGTGGTAGAGCAGCAAAATGGGGAACTCAAGCGACTAAACGAGTATATAAAGGGAGAATACTAT

mRNA sequence

ATGCAGGGGATGGTGAGAGCAGCACGATGGTGGCGGGAGGCGGTGAAGACGGCGATCTGGCAGAGGACGTGCCGGAGAGAAACGAATGGAACGGAGAAGGTTATTGTGGAAGGAGGTTGGAAAGGTTTGGAGAATATTAGCGTCGCGGAGATCATAGTTTCGAGAAAGCGAGGGGGAGACGAAAGTATTGGCTCCTGGTTGTGGTGCCGAGAGGACGATGCCGCCATTGATGCTGTGCAAAATATGGCTAGAAACAACAGTGGATCGTTGGTGGTGATGAAGCCTGAAGGCCAACACATTGCTGGAATCGTCACAGAACGAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATGTACACAAAAGTTGGGGAAATAATGACTCGTGAGGACAAACTAGTAACTGTAACGTCTGACACAAACATCCTTAAAGCAATGCAGCTTATGACGGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAAATAGTTGGCGTGATTTCTATAGTAGATGTTGTCAGAGCTGTGGTAGAGCAGCAAAATGGGGAACTCAAGCGACTAAACGAGTATATAAAGGGAGAATACTAT

Coding sequence (CDS)

ATGCAGGGGATGGTGAGAGCAGCACGATGGTGGCGGGAGGCGGTGAAGACGGCGATCTGGCAGAGGACGTGCCGGAGAGAAACGAATGGAACGGAGAAGGTTATTGTGGAAGGAGGTTGGAAAGGTTTGGAGAATATTAGCGTCGCGGAGATCATAGTTTCGAGAAAGCGAGGGGGAGACGAAAGTATTGGCTCCTGGTTGTGGTGCCGAGAGGACGATGCCGCCATTGATGCTGTGCAAAATATGGCTAGAAACAACAGTGGATCGTTGGTGGTGATGAAGCCTGAAGGCCAACACATTGCTGGAATCGTCACAGAACGAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATGTACACAAAAGTTGGGGAAATAATGACTCGTGAGGACAAACTAGTAACTGTAACGTCTGACACAAACATCCTTAAAGCAATGCAGCTTATGACGGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAAATAGTTGGCGTGATTTCTATAGTAGATGTTGTCAGAGCTGTGGTAGAGCAGCAAAATGGGGAACTCAAGCGACTAAACGAGTATATAAAGGGAGAATACTAT

Protein sequence

MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGDESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAVVEQQNGELKRLNEYIKGEYY
Homology
BLAST of MS016837 vs. NCBI nr
Match: XP_022144196.1 (CBS domain-containing protein CBSX3, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 60
           MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD
Sbjct: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 60

Query: 61  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRS 120
           ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER DYLKKIIADGRS
Sbjct: 61  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER-DYLKKIIADGRS 120

Query: 121 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 180
           PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV
Sbjct: 121 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 180

Query: 181 VEQQNGELKRLNEYIKGEYY 201
           VEQQNGELKRLNEYIKGEYY
Sbjct: 181 VEQQNGELKRLNEYIKGEYY 199

BLAST of MS016837 vs. NCBI nr
Match: XP_022144195.1 (CBS domain-containing protein CBSX3, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 60
           MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD
Sbjct: 6   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 65

Query: 61  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRS 120
           ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER DYLKKIIADGRS
Sbjct: 66  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER-DYLKKIIADGRS 125

Query: 121 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 180
           PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV
Sbjct: 126 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 185

Query: 181 VEQQNGELKRLNEYIKGEYY 201
           VEQQNGELKRLNEYIKGEYY
Sbjct: 186 VEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. NCBI nr
Match: XP_023002498.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 298.1 bits (762), Expect = 5.6e-77
Identity = 165/208 (79.33%), Postives = 175/208 (84.13%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVI-------VEGGWKGLENISVAEIIV 60
           MQGMVRA R W+E +K AI Q +CRRETN  EK+             KGLENISVAEII 
Sbjct: 1   MQGMVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSDIGASSSMLKGLENISVAEIIS 60

Query: 61  SRKRGGDESIGS-WLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLK 120
           S+   GD SIGS WL CR DD AIDAVQNMARNN GSLVV+KPEGQHIAGIVTER DYLK
Sbjct: 61  SK---GDGSIGSPWLSCRADDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTER-DYLK 120

Query: 121 KIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVIS 180
           KIIADGRSP+YTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGK+VG+IS
Sbjct: 121 KIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMIS 180

Query: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           IVDVVRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. NCBI nr
Match: XP_023538057.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.4 bits (755), Expect = 3.6e-76
Identity = 164/209 (78.47%), Postives = 177/209 (84.69%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGG--------WKGLENISVAEII 60
           MQG+VRA R W+E +K AI Q +CRRETN  EK + EG          KGLENISVAEI+
Sbjct: 1   MQGIVRAVRSWQETLKIAISQHSCRRETNQVEK-LFEGSDLGASSSMLKGLENISVAEIV 60

Query: 61  VSRKRGGDESIGS-WLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYL 120
            S+   GD SIGS WL CR +D AIDAVQNMARNN GSLVV+KPEGQHIAGIVTER DYL
Sbjct: 61  SSK---GDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTER-DYL 120

Query: 121 KKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVI 180
           KKIIADGRSP+YTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGK+VG+I
Sbjct: 121 KKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMI 180

Query: 181 SIVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           SIVDVVRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 SIVDVVRAVVEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. NCBI nr
Match: XP_022951679.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 162/208 (77.88%), Postives = 174/208 (83.65%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGG-------WKGLENISVAEIIV 60
           MQG+VRA R W+E +K AI Q +CRRETN  EK+             KGLENISVAEI+ 
Sbjct: 1   MQGIVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSNLGASSSMLKGLENISVAEIVS 60

Query: 61  SRKRGGDESIGS-WLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLK 120
           S+   GD SIGS WL CR DD AI AVQNMARNN GSLVV+KPEGQHIAGIVTER DYLK
Sbjct: 61  SK---GDGSIGSPWLSCRADDTAIVAVQNMARNNIGSLVVLKPEGQHIAGIVTER-DYLK 120

Query: 121 KIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVIS 180
           KIIADGRSP+YTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGK+VG+IS
Sbjct: 121 KIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMIS 180

Query: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           IVDVVRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.5e-42
Identity = 89/160 (55.62%), Postives = 122/160 (76.25%), Query Frame = 0

Query: 42  GLENISVAEIIVSRKRGGDESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKP-EGQHI 101
           G E+ ++++++ S+ +  D   GSWLWC  DD   DAV++M ++N G+LVV+KP E Q +
Sbjct: 51  GFESTTISDVMKSKGKSAD---GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQAL 110

Query: 102 AGIVTERADYLKKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHV 161
           AGI+TER DYL+KII  GRS   TKVG+IMT E+KL+TVT +T +L+AMQLMT+NRIRH+
Sbjct: 111 AGIITER-DYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHI 170

Query: 162 PVIDGK-IVGVISIVDVVRAVVEQQNGELKRLNEYIKGEY 200
           PVI  K ++G++SI DVVRAVV +   EL+RLN YI+G Y
Sbjct: 171 PVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206

BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09
Identity = 42/123 (34.15%), Postives = 72/123 (58.54%), Query Frame = 0

Query: 77  DAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKVGEIMTREDKL 136
           +A + M  +N GSLVV+  + + + GI+TER D +K   A     + + V + MT++ K 
Sbjct: 24  EAAKEMKEHNLGSLVVIDSQNR-VVGIITER-DIVK---AASNRDIDSPVEKYMTKDVK- 83

Query: 137 VTVTSDTNILKAMQLMTENRIRHVPVI--DGKIVGVISIVDVVRAVVEQQNGELKRLNEY 196
             VT DT +  A+ +M  N  RH+P+I  +GK+ G++SI D+ RA+++    +  +  E 
Sbjct: 84  -GVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEE 139

Query: 197 IKG 198
           +KG
Sbjct: 144 VKG 139

BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: Q9SJQ5 (CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 0

Query: 67  LWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKV 126
           L   E     DA + MA     + V++      ++GIVT++ D   ++IA+G  P +T V
Sbjct: 71  LTINEGTTVFDACRRMAARRVDA-VLLTDSSALLSGIVTDK-DIATRVIAEGLRPEHTLV 130

Query: 127 GEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVID-GKIVGVISI 174
            ++MTR    + VTSD+  ++A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 131 SKVMTRNP--IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDI 174

BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: Q9LF97 (CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 71  EDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKVGEIM 130
           E     DA + MA     +  ++      ++GIVT++ D   ++IA+G  P  T V ++M
Sbjct: 77  EGTTVFDACRRMAARRVDA-CLLTDSSALLSGIVTDK-DVATRVIAEGLRPDQTLVSKVM 136

Query: 131 TREDKLVTVTSDTNILKAMQLMTENRIRHVPVID-GKIVGVISI 174
           TR    + VTSD+  L+A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 137 TRNP--IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDI 176

BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: P42851 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=guaB PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = 0

Query: 45  NISVAEII--VSRKRGGDESIGSWLWCREDDAAID-AVQNMARNNSGSLVVMKPEGQHIA 104
           N+S+ E +  V R +  +  I   +     D  ID A+  M ++    L V+  E   + 
Sbjct: 79  NMSIEEQVEQVKRVKRAERFIVEDVITIAPDETIDYALFLMEKHGIDGLPVV--EEDRVV 138

Query: 105 GIVTERADYLKKIIA--DGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRH 164
           GI+T      KK IA  +GR+     V E+MTRE  ++TV    ++ +A+++M ENRI  
Sbjct: 139 GIIT------KKDIAAREGRT-----VKELMTRE--VITVPESVDVEEALKIMMENRIDR 198

Query: 165 VPVI--DGKIVGVISIVDVV-----RAVVEQQNGEL 189
           +PV+  DGK+VG+I++ D+V     +  V  + GEL
Sbjct: 199 LPVVNEDGKLVGLITMSDLVARKKYKNAVRNEKGEL 219

BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1CSL4 (CBS domain-containing protein CBSX3, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013947 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 60
           MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD
Sbjct: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 60

Query: 61  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRS 120
           ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER DYLKKIIADGRS
Sbjct: 61  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER-DYLKKIIADGRS 120

Query: 121 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 180
           PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV
Sbjct: 121 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 180

Query: 181 VEQQNGELKRLNEYIKGEYY 201
           VEQQNGELKRLNEYIKGEYY
Sbjct: 181 VEQQNGELKRLNEYIKGEYY 199

BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1CQZ0 (CBS domain-containing protein CBSX3, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013947 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 60
           MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD
Sbjct: 6   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGD 65

Query: 61  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRS 120
           ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER DYLKKIIADGRS
Sbjct: 66  ESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTER-DYLKKIIADGRS 125

Query: 121 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 180
           PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV
Sbjct: 126 PMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAV 185

Query: 181 VEQQNGELKRLNEYIKGEYY 201
           VEQQNGELKRLNEYIKGEYY
Sbjct: 186 VEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1KTQ7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496322 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77
Identity = 165/208 (79.33%), Postives = 175/208 (84.13%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVI-------VEGGWKGLENISVAEIIV 60
           MQGMVRA R W+E +K AI Q +CRRETN  EK+             KGLENISVAEII 
Sbjct: 1   MQGMVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSDIGASSSMLKGLENISVAEIIS 60

Query: 61  SRKRGGDESIGS-WLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLK 120
           S+   GD SIGS WL CR DD AIDAVQNMARNN GSLVV+KPEGQHIAGIVTER DYLK
Sbjct: 61  SK---GDGSIGSPWLSCRADDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTER-DYLK 120

Query: 121 KIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVIS 180
           KIIADGRSP+YTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGK+VG+IS
Sbjct: 121 KIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMIS 180

Query: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           IVDVVRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1GJI0 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454421 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.7e-76
Identity = 162/208 (77.88%), Postives = 174/208 (83.65%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGG-------WKGLENISVAEIIV 60
           MQG+VRA R W+E +K AI Q +CRRETN  EK+             KGLENISVAEI+ 
Sbjct: 1   MQGIVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSNLGASSSMLKGLENISVAEIVS 60

Query: 61  SRKRGGDESIGS-WLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLK 120
           S+   GD SIGS WL CR DD AI AVQNMARNN GSLVV+KPEGQHIAGIVTER DYLK
Sbjct: 61  SK---GDGSIGSPWLSCRADDTAIVAVQNMARNNIGSLVVLKPEGQHIAGIVTER-DYLK 120

Query: 121 KIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVIS 180
           KIIADGRSP+YTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGK+VG+IS
Sbjct: 121 KIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMIS 180

Query: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           IVDVVRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 IVDVVRAVVEQQNGELKRLNEYIKGEYY 204

BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1HF98 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462506 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.2e-71
Identity = 155/209 (74.16%), Postives = 170/209 (81.34%), Query Frame = 0

Query: 1   MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGG--------WKGLENISVAEII 60
           MQG+VRA R W+E +K A    +CRRETN  EK I+EG          KGLENI+VAEI+
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEK-ILEGSESRGSSSPLKGLENITVAEIV 60

Query: 61  VSRKRGGDESIG-SWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYL 120
               R GD SIG SW  C  DDAAID VQNMARNN GSLVV+KPEGQHIAGIVTE  DYL
Sbjct: 61  ---SRNGDGSIGSSWFSCSADDAAIDTVQNMARNNVGSLVVLKPEGQHIAGIVTE-GDYL 120

Query: 121 KKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVI 180
           KKIIADGR P+YTKVGEIMT EDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGK+VG+I
Sbjct: 121 KKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKLVGII 180

Query: 181 SIVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           S+VDVV+AVV+QQNGEL+RLNEYIKGE Y
Sbjct: 181 SVVDVVKAVVKQQNGELERLNEYIKGESY 204

BLAST of MS016837 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 105/161 (65.22%), Postives = 134/161 (83.23%), Query Frame = 0

Query: 41  KGLENISVAEIIVSRKRGGDESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKP-EGQH 100
           KGLEN++VA+++ ++    D  I +W+ CR +D   DAV+NMA++N GSLVV++P + Q+
Sbjct: 38  KGLENLTVADVLSTK----DTDIDTWISCRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQY 97

Query: 101 IAGIVTERADYLKKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRH 160
           IAGIVTER DY+KKII  GRS   TKVGE+MT E KLVTV+S TNI+KAMQLM+EN IRH
Sbjct: 98  IAGIVTER-DYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRH 157

Query: 161 VPVIDGKIVGVISIVDVVRAVVEQQNGELKRLNEYIKGEYY 201
           VPVIDGKIVG+IS+VDVV+A+V+ QNGELKRLNE+IKG+YY
Sbjct: 158 VPVIDGKIVGLISMVDVVKAIVDHQNGELKRLNEFIKGDYY 193

BLAST of MS016837 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43
Identity = 89/160 (55.62%), Postives = 122/160 (76.25%), Query Frame = 0

Query: 42  GLENISVAEIIVSRKRGGDESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKP-EGQHI 101
           G E+ ++++++ S+ +  D   GSWLWC  DD   DAV++M ++N G+LVV+KP E Q +
Sbjct: 51  GFESTTISDVMKSKGKSAD---GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQAL 110

Query: 102 AGIVTERADYLKKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHV 161
           AGI+TER DYL+KII  GRS   TKVG+IMT E+KL+TVT +T +L+AMQLMT+NRIRH+
Sbjct: 111 AGIITER-DYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHI 170

Query: 162 PVIDGK-IVGVISIVDVVRAVVEQQNGELKRLNEYIKGEY 200
           PVI  K ++G++SI DVVRAVV +   EL+RLN YI+G Y
Sbjct: 171 PVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206

BLAST of MS016837 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-09
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 0

Query: 67  LWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKV 126
           L   E     DA + MA     + V++      ++GIVT++ D   ++IA+G  P +T V
Sbjct: 71  LTINEGTTVFDACRRMAARRVDA-VLLTDSSALLSGIVTDK-DIATRVIAEGLRPEHTLV 130

Query: 127 GEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVID-GKIVGVISI 174
            ++MTR    + VTSD+  ++A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 131 SKVMTRNP--IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDI 174

BLAST of MS016837 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 71  EDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKVGEIM 130
           E     DA + MA     +  ++      ++GIVT++ D   ++IA+G  P  T V ++M
Sbjct: 77  EGTTVFDACRRMAARRVDA-CLLTDSSALLSGIVTDK-DVATRVIAEGLRPDQTLVSKVM 136

Query: 131 TREDKLVTVTSDTNILKAMQLMTENRIRHVPVID-GKIVGVISI 174
           TR    + VTSD+  L+A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 137 TRNP--IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDI 176

BLAST of MS016837 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 71  EDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKVGEIM 130
           E     DA + MA     +  ++      ++GIVT++ D   ++IA+G  P  T V ++M
Sbjct: 77  EGTTVFDACRRMAARRVDA-CLLTDSSALLSGIVTDK-DVATRVIAEGLRPDQTLVSKVM 136

Query: 131 TREDKLVTVTSDTNILKAMQLMTENRIRHVPVID-GKIVGVISI 174
           TR    + VTSD+  L+A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 137 TRNP--IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDI 176

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022144196.12.2e-10599.50CBS domain-containing protein CBSX3, mitochondrial isoform X2 [Momordica charant... [more]
XP_022144195.12.2e-10599.50CBS domain-containing protein CBSX3, mitochondrial isoform X1 [Momordica charant... [more]
XP_023002498.15.6e-7779.33CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima][more]
XP_023538057.13.6e-7678.47CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. p... [more]
XP_022951679.11.8e-7577.88CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9LEV33.5e-4255.63CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P329871.8e-0934.15Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=228... [more]
Q9SJQ51.3e-0731.48CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCB... [more]
Q9LF971.1e-0631.73CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana OX=3702 GN=CBSCB... [more]
P428511.6e-0532.69Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587... [more]
Match NameE-valueIdentityDescription
A0A6J1CSL41.1e-10599.50CBS domain-containing protein CBSX3, mitochondrial isoform X2 OS=Momordica chara... [more]
A0A6J1CQZ01.1e-10599.50CBS domain-containing protein CBSX3, mitochondrial isoform X1 OS=Momordica chara... [more]
A0A6J1KTQ72.7e-7779.33CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3... [more]
A0A6J1GJI08.7e-7677.88CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX... [more]
A0A6J1HF982.2e-7174.16CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT1G47271.11.0e-5265.22Cystathionine beta-synthase (CBS) family protein [more]
AT5G10860.12.5e-4355.63Cystathionine beta-synthase (CBS) family protein [more]
AT2G36500.19.1e-0931.48CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [more]
AT3G52950.17.7e-0831.73CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [more]
AT3G52950.27.7e-0831.73CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 135..181
e-value: 3.5E-9
score: 46.5
coord: 65..116
e-value: 14.0
score: 8.4
IPR000644CBS domainPFAMPF00571CBScoord: 126..181
e-value: 3.0E-12
score: 46.8
IPR000644CBS domainPROSITEPS51371CBScoord: 130..188
score: 14.334299
NoneNo IPR availableGENE3D3.10.580.10coord: 43..199
e-value: 8.6E-40
score: 137.8
NoneNo IPR availablePANTHERPTHR43080:SF12CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEINcoord: 1..199
NoneNo IPR availablePANTHERPTHR43080CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIALcoord: 1..199
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 66..188
IPR044725CBS domain-containing protein CBSX3, CBS domainCDDcd04623CBS_pair_bac_eukcoord: 69..178
e-value: 1.01715E-39
score: 129.843

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016837.1MS016837.1mRNA