MS016837 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGGGATGGTGAGAGCAGCACGATGGTGGCGGGAGGCGGTGAAGACGGCGATCTGGCAGAGGACGTGCCGGAGAGAAACGAATGGAACGGAGAAGGTTATTGTGGAAGGAGGTTGGAAAGGTTTGGAGAATATTAGCGTCGCGGAGATCATAGTTTCGAGAAAGCGAGGGGGAGACGAAAGTATTGGCTCCTGGTTGTGGTGCCGAGAGGACGATGCCGCCATTGATGCTGTGCAAAATGTAGCGAGATCAGTTTCGTTGGTTAGGGTTTCAGATTTGGAAAGATGAGGATTTTGATTGTTTGTTTGTTTGTTTGTTGCAGATGGCTAGAAACAACAGTGGATCGTTGGTGGTGATGAAGCCTGAAGGCCAACACATTGCTGGAATCGTCACAGAACGAGGTAATTCAATTCAAACTTCATGATCGCGGATTAAACATCAACATCAATTACTCATTCAAATCTGATCAACTATAAACCCAAACCCAATGTAATTTGAAATTATTTTAAATAATTTCAATTACACTCCTATCAAACATGAATACAAAGTTGTAAAATAGTAGTAGACTGACTTCCGAAAATAATAAAAAAACCGATAACAACTAGACAATGGACCAAAACGAACATAACTCAACGGTAATTGTAGTAGGGTCAAACGATTGACCCGTGAATAGTCGAGTTGCACACAAACTGACCCGGACACACGAATATAAAAAAAAAAATCATTTATTTTTAGCATAAAATTCATCGAGAACATATTTGAATCAATTTTAAAGGGCAATATTAGAGGTGAACTTTTAAAACCATCCAGATATAAAAATTTGGTTGGAGCATTTTGAATAATTTAGCCCCAAAAAATTACATTACAGAACTCATTGTCACACCAAAGAATAACTTGCCATGTCAGGATAAACATCCTAATTACAAAAATTTTAAATATAGGAAACTAATTACTGAAACGGTTAAAAGCAAATGGACTAAAAATGAAATTCAACCAAAAATTTAATGAGCAAATATATATGGAGAAAGGGAGTTGTTTCTCATTTGTGCTCCAATCCATACATATTGTCTTGGTAATGGCTGTTTTCTGATGGATCCTAAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATGTACACAAAAGTTGGGGAAATAATGACTCGTGAGGTAATTTTTCTGTCTTCTTTCAGCTACAAAACCAGATTACAAATCGACAGTTTCTCACTCATACATTTTTATTTTTCATGAACAGGACAAACTAGTAACTGTAACGTCTGACACAAACATCCTTAAAGCAATGCAGCTTATGACGGGTAAATACTAAATACACTGTCATTTATATTCTTAAATTACCATAAAAATGGGAGTCAGCTCCTTCTCCAGCTGCATCACACAGCCATCTAAGAGGAGAATAAACCAGTTGAAGCTCTTGGCATTTGCAGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAAATAGTTGGCGTGATTTCTATAGTAGATGTTGTCAGAGCTGTGGTAGAGCAGCAAAATGGGGAACTCAAGCGACTAAACGAGTATATAAAGGGAGAATACTAT ATGCAGGGGATGGTGAGAGCAGCACGATGGTGGCGGGAGGCGGTGAAGACGGCGATCTGGCAGAGGACGTGCCGGAGAGAAACGAATGGAACGGAGAAGGTTATTGTGGAAGGAGGTTGGAAAGGTTTGGAGAATATTAGCGTCGCGGAGATCATAGTTTCGAGAAAGCGAGGGGGAGACGAAAGTATTGGCTCCTGGTTGTGGTGCCGAGAGGACGATGCCGCCATTGATGCTGTGCAAAATATGGCTAGAAACAACAGTGGATCGTTGGTGGTGATGAAGCCTGAAGGCCAACACATTGCTGGAATCGTCACAGAACGAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATGTACACAAAAGTTGGGGAAATAATGACTCGTGAGGACAAACTAGTAACTGTAACGTCTGACACAAACATCCTTAAAGCAATGCAGCTTATGACGGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAAATAGTTGGCGTGATTTCTATAGTAGATGTTGTCAGAGCTGTGGTAGAGCAGCAAAATGGGGAACTCAAGCGACTAAACGAGTATATAAAGGGAGAATACTAT ATGCAGGGGATGGTGAGAGCAGCACGATGGTGGCGGGAGGCGGTGAAGACGGCGATCTGGCAGAGGACGTGCCGGAGAGAAACGAATGGAACGGAGAAGGTTATTGTGGAAGGAGGTTGGAAAGGTTTGGAGAATATTAGCGTCGCGGAGATCATAGTTTCGAGAAAGCGAGGGGGAGACGAAAGTATTGGCTCCTGGTTGTGGTGCCGAGAGGACGATGCCGCCATTGATGCTGTGCAAAATATGGCTAGAAACAACAGTGGATCGTTGGTGGTGATGAAGCCTGAAGGCCAACACATTGCTGGAATCGTCACAGAACGAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATGTACACAAAAGTTGGGGAAATAATGACTCGTGAGGACAAACTAGTAACTGTAACGTCTGACACAAACATCCTTAAAGCAATGCAGCTTATGACGGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAAATAGTTGGCGTGATTTCTATAGTAGATGTTGTCAGAGCTGTGGTAGAGCAGCAAAATGGGGAACTCAAGCGACTAAACGAGTATATAAAGGGAGAATACTAT MQGMVRAARWWREAVKTAIWQRTCRRETNGTEKVIVEGGWKGLENISVAEIIVSRKRGGDESIGSWLWCREDDAAIDAVQNMARNNSGSLVVMKPEGQHIAGIVTERADYLKKIIADGRSPMYTKVGEIMTREDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKIVGVISIVDVVRAVVEQQNGELKRLNEYIKGEYY Homology
BLAST of MS016837 vs. NCBI nr
Match: XP_022144196.1 (CBS domain-containing protein CBSX3, mitochondrial isoform X2 [Momordica charantia]) HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of MS016837 vs. NCBI nr
Match: XP_022144195.1 (CBS domain-containing protein CBSX3, mitochondrial isoform X1 [Momordica charantia]) HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of MS016837 vs. NCBI nr
Match: XP_023002498.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 298.1 bits (762), Expect = 5.6e-77 Identity = 165/208 (79.33%), Postives = 175/208 (84.13%), Query Frame = 0
BLAST of MS016837 vs. NCBI nr
Match: XP_023538057.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295.4 bits (755), Expect = 3.6e-76 Identity = 164/209 (78.47%), Postives = 177/209 (84.69%), Query Frame = 0
BLAST of MS016837 vs. NCBI nr
Match: XP_022951679.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75 Identity = 162/208 (77.88%), Postives = 174/208 (83.65%), Query Frame = 0
BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.5e-42 Identity = 89/160 (55.62%), Postives = 122/160 (76.25%), Query Frame = 0
BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09 Identity = 42/123 (34.15%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: Q9SJQ5 (CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB2 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07 Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 0
BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: Q9LF97 (CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB3 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of MS016837 vs. ExPASy Swiss-Prot
Match: P42851 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=guaB PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05 Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = 0
BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1CSL4 (CBS domain-containing protein CBSX3, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013947 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1CQZ0 (CBS domain-containing protein CBSX3, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013947 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1KTQ7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496322 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77 Identity = 165/208 (79.33%), Postives = 175/208 (84.13%), Query Frame = 0
BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1GJI0 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454421 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 8.7e-76 Identity = 162/208 (77.88%), Postives = 174/208 (83.65%), Query Frame = 0
BLAST of MS016837 vs. ExPASy TrEMBL
Match: A0A6J1HF98 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462506 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.2e-71 Identity = 155/209 (74.16%), Postives = 170/209 (81.34%), Query Frame = 0
BLAST of MS016837 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52 Identity = 105/161 (65.22%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of MS016837 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43 Identity = 89/160 (55.62%), Postives = 122/160 (76.25%), Query Frame = 0
BLAST of MS016837 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 58.2 bits (139), Expect = 9.1e-09 Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 0
BLAST of MS016837 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of MS016837 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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