MS016807 (gene) Bitter gourd (TR) v1

Overview


Name	MS016807
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	peroxisomal membrane protein 11A
Location	scaffold9_1: 155272 .. 156012 (+)
RNA-Seq Expression	MS016807
Synteny	MS016807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAACCTCCGGCGTCCTCAGCCGAGAAACACAGAGACTTCTTGAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGTGTTGACAAGCTTCTGAAGATTTCCCGGTACGCCACGAAGATCATCCTCTCCTCTTCTGCTGTTCCCGAATCCCTCGCTCTGACGGACCGTCTCAAGAGCTTTGAGTCCACCGTCGGCGTGAGTCGGAAGGCCTTCCGCCTCGGAAAGTTCGTCCAGGACTTGAACGCTCTGAGAAATTCGCATTTCGAATCCACTCAAGAAATTGTCCTCGCCGTCGTTGCCTATGGCGGAGAGGGGTTTTATTACTTTGTCGAACAGTTTGTTTGGTTGGCTAAATCCGGTTTGATTGACAAACGTTACTCCAGTAGCTTGCAGAAGATCAGTGCGTGGGCTGAATTTATCGGGTATATTGGTAGTATTTCGTTGAAAATTAGGGATTTGAATCGGATAATCGACGACGAGGCGTGTTTGAGAGCGAGTATTGAGATCGCAGTGACTAGGGGGAATGGACATCTGGAAGAGGAAGAGAAGATGAAGAAGTTGCGGGAGAAGAAGTTGATGAAGGAGCTTTCCATTGTTCAAGATTTCGCCGATGGATTCATGGCTCTGGCGGACATTCGAGATGGGAATGGCCGGCTTTCAGGTCCCCTTCTAATTTCTTGTGCTGGCCTTCTCTCTGCATTGATTAGCACTCATAAGAATTGGATATCATGC

mRNA sequence

ATGGCTTCCAAACCTCCGGCGTCCTCAGCCGAGAAACACAGAGACTTCTTGAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGTGTTGACAAGCTTCTGAAGATTTCCCGGTACGCCACGAAGATCATCCTCTCCTCTTCTGCTGTTCCCGAATCCCTCGCTCTGACGGACCGTCTCAAGAGCTTTGAGTCCACCGTCGGCGTGAGTCGGAAGGCCTTCCGCCTCGGAAAGTTCGTCCAGGACTTGAACGCTCTGAGAAATTCGCATTTCGAATCCACTCAAGAAATTGTCCTCGCCGTCGTTGCCTATGGCGGAGAGGGGTTTTATTACTTTGTCGAACAGTTTGTTTGGTTGGCTAAATCCGGTTTGATTGACAAACGTTACTCCAGTAGCTTGCAGAAGATCAGTGCGTGGGCTGAATTTATCGGGTATATTGGTAGTATTTCGTTGAAAATTAGGGATTTGAATCGGATAATCGACGACGAGGCGTGTTTGAGAGCGAGTATTGAGATCGCAGTGACTAGGGGGAATGGACATCTGGAAGAGGAAGAGAAGATGAAGAAGTTGCGGGAGAAGAAGTTGATGAAGGAGCTTTCCATTGTTCAAGATTTCGCCGATGGATTCATGGCTCTGGCGGACATTCGAGATGGGAATGGCCGGCTTTCAGGTCCCCTTCTAATTTCTTGTGCTGGCCTTCTCTCTGCATTGATTAGCACTCATAAGAATTGGATATCATGC

Coding sequence (CDS)

ATGGCTTCCAAACCTCCGGCGTCCTCAGCCGAGAAACACAGAGACTTCTTGAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGTGTTGACAAGCTTCTGAAGATTTCCCGGTACGCCACGAAGATCATCCTCTCCTCTTCTGCTGTTCCCGAATCCCTCGCTCTGACGGACCGTCTCAAGAGCTTTGAGTCCACCGTCGGCGTGAGTCGGAAGGCCTTCCGCCTCGGAAAGTTCGTCCAGGACTTGAACGCTCTGAGAAATTCGCATTTCGAATCCACTCAAGAAATTGTCCTCGCCGTCGTTGCCTATGGCGGAGAGGGGTTTTATTACTTTGTCGAACAGTTTGTTTGGTTGGCTAAATCCGGTTTGATTGACAAACGTTACTCCAGTAGCTTGCAGAAGATCAGTGCGTGGGCTGAATTTATCGGGTATATTGGTAGTATTTCGTTGAAAATTAGGGATTTGAATCGGATAATCGACGACGAGGCGTGTTTGAGAGCGAGTATTGAGATCGCAGTGACTAGGGGGAATGGACATCTGGAAGAGGAAGAGAAGATGAAGAAGTTGCGGGAGAAGAAGTTGATGAAGGAGCTTTCCATTGTTCAAGATTTCGCCGATGGATTCATGGCTCTGGCGGACATTCGAGATGGGAATGGCCGGCTTTCAGGTCCCCTTCTAATTTCTTGTGCTGGCCTTCTCTCTGCATTGATTAGCACTCATAAGAATTGGATATCATGC

Protein sequence

MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRLKSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLAKSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGHLEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALISTHKNWISC

Homology

[Close]

BLAST of MS016807 vs. NCBI nr
Match: XP_022144177.1 (peroxisomal membrane protein 11A [Momordica charantia])

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-131
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL
Sbjct: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA
Sbjct: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH
Sbjct: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
           LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST
Sbjct: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. NCBI nr
Match: XP_023002137.1 (peroxisomal membrane protein 11A-like [Cucurbita maxima] >XP_023002138.1 peroxisomal membrane protein 11A-like [Cucurbita maxima])

HSP 1 Score: 425.2 bits (1092), Expect = 3.7e-115
Identity = 212/247 (85.83%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASK P SSAEKHRDF NHLEAYLAKRDGVDKLLKISRYATKIILSSSA+PESL LT RL
Sbjct: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES VGVSRKAFRLGKFVQDLNALRNSHFES+QE+VLA+VAYGGEG YYF+EQF+WL 
Sbjct: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLV 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           K+GLIDKRYSS LQKIS WAEFIGYIGSISLK RD N+I++DEACL+AS++IAV++G+G+
Sbjct: 121 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKL+ KKLMK+LSIVQDFADGFMALADIRDGNGRLSGPL +SCAGLLSALIST
Sbjct: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. NCBI nr
Match: XP_022950993.1 (peroxisomal membrane protein 11A-like [Cucurbita moschata])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 213/247 (86.23%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASK P SSAEKHRDF NHLEAYLAKRDGVDKLLKISRYATKIILSSSA+PESL LT RL
Sbjct: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES VGVSRKAFRLGKFVQDLNALRNSHFES+QE+VLA+VAYGGEG YYF+EQF+WL 
Sbjct: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLI 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           K+GLIDKRYSS LQKISAWAEFIGYIGSISLK RD N+I++DEA L+AS++IAV++GNG+
Sbjct: 121 KAGLIDKRYSSRLQKISAWAEFIGYIGSISLKFRDFNQIVEDEARLKASMDIAVSKGNGN 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKL+ KKLMK+LSIVQDFADGFMALADIRDGNGRLSGPL +SCAGLLSALIST
Sbjct: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. NCBI nr
Match: XP_023537452.1 (peroxisomal membrane protein 11A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.6 bits (1080), Expect = 9.2e-114
Identity = 209/247 (84.62%), Postives = 230/247 (93.12%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASK P SSAEKHRDF NHLEAYLAKRDGVDKLLKISRYATKIILSSSA+PES  LT RL
Sbjct: 47  MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESFPLTQRL 106

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES VG+SRKAFRLGKFVQDLNALRNSHFES+QE+VLA+VAYGGEG YYF+EQF+WL 
Sbjct: 107 KSFESNVGISRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLV 166

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           K+GLIDKRYS+ LQKISAWAEFIGYIGSISLK RD N+I++DEACL+ASI+I V++G+G+
Sbjct: 167 KAGLIDKRYSNRLQKISAWAEFIGYIGSISLKFRDFNQIVEDEACLKASIDIGVSKGDGN 226

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
             EEEKMKKL+ KKLMK+LSIVQDFADGFMALADIRDGNGRLSGPL +SCAGLLSALIST
Sbjct: 227 RVEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 286

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 287 HKNWISC 293

[Close]

BLAST of MS016807 vs. NCBI nr
Match: XP_004152708.1 (peroxisomal membrane protein 11A [Cucumis sativus] >KGN62580.1 hypothetical protein Csa_022319 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 6.0e-113
Identity = 212/247 (85.83%), Postives = 227/247 (91.90%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASKPP SS EK RDF NHLEAYLAKRDGVDKLLKISRY TKIILSSSA+ ES  LT RL
Sbjct: 1   MASKPPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTQRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES+VGVSRKAFRLGKF+QDLNALRNSHFES QE +LA++AYGGEGFYYFVEQF+WLA
Sbjct: 61  KSFESSVGVSRKAFRLGKFIQDLNALRNSHFESNQEFLLALLAYGGEGFYYFVEQFIWLA 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           KSGLIDKR+SS LQKISAWAE IGYIGSISLK RDLNRI++DEACL+ASIEIAV RG GH
Sbjct: 121 KSGLIDKRHSSRLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGH 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKLR K+LMK+LSIVQDFADGFMA+AD+RDGNGR SGPLLIS AGLLSALIST
Sbjct: 181 REEEEKMKKLRAKRLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. ExPASy Swiss-Prot
Match: Q9FZF1 (Peroxisomal membrane protein 11A OS=Arabidopsis thaliana OX=3702 GN=PEX11A PE=1 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-90
Identity = 165/248 (66.53%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 1   MASKPPAS-SAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDR 60
           MA+K P   +  K RDFLNHLE YL+KRDGVDKLLKISRYATKIIL+SS +PE+ ++  R
Sbjct: 1   MATKAPEKITKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPR 60

Query: 61  LKSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWL 120
           LKSFES+VGVSRKAFRLGKFVQD+NALR+S ++S  E+VL ++AYGGEG YYFVEQF+WL
Sbjct: 61  LKSFESSVGVSRKAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWL 120

Query: 121 AKSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNG 180
            KSGLID ++S  LQKISAWAE +GY+GS+S+KIRDL ++ D+E+C+ ++IEI+V+RG  
Sbjct: 121 TKSGLIDAKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLA 180

Query: 181 HLEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIS 240
              E+EKMK ++EKK +K LSI+QD ADG M +ADIRDG G LS P +IS AGL SA++S
Sbjct: 181 CDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVS 240

Query: 241 THKNWISC 248
           THKNWISC
Sbjct: 241 THKNWISC 248

[Close]

BLAST of MS016807 vs. ExPASy Swiss-Prot
Match: A2XFQ8 (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-3 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59
Identity = 128/245 (52.24%), Postives = 174/245 (71.02%), Query Frame = 0


Query: 3   SKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRLKS 62
           S+ PA+     RDFL H+EAYL++RDGVDKLLKISRYA ++ L++  +P   A + RLKS
Sbjct: 13  SRKPAAHPPP-RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPP--AASARLKS 72

Query: 63  FESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLAKS 122
           FES+VG+SRKAFRLGKFVQ++NALR +H      +  A++AYGGEG YYF+EQFVWLAK+
Sbjct: 73  FESSVGLSRKAFRLGKFVQNVNALR-AHPHPPPAV--ALLAYGGEGVYYFLEQFVWLAKA 132

Query: 123 GLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGHLE 182
           GL+       LQ++SAWAE +GY+GSI++K+ ++ +       L +S+++ +    G  E
Sbjct: 133 GLLPAHLLPRLQRLSAWAELLGYVGSITIKLEEIGK-------LESSVKMRLK--EGCRE 192

Query: 183 EEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALISTHK 242
           E + ++ LR K L+K +S+VQD AD  MAL D+ DG G L    L++ AGLLSALIS HK
Sbjct: 193 ESDVVRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHK 242

Query: 243 NWISC 248
           NW SC
Sbjct: 253 NWNSC 242

[Close]

BLAST of MS016807 vs. ExPASy Swiss-Prot
Match: Q10MN2 (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-3 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59
Identity = 128/245 (52.24%), Postives = 174/245 (71.02%), Query Frame = 0


Query: 3   SKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRLKS 62
           S+ PA+     RDFL H+EAYL++RDGVDKLLKISRYA ++ L++  +P   A + RLKS
Sbjct: 13  SRKPAAHPPP-RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPP--AASARLKS 72

Query: 63  FESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLAKS 122
           FES+VG+SRKAFRLGKFVQ++NALR +H      +  A++AYGGEG YYF+EQFVWLAK+
Sbjct: 73  FESSVGLSRKAFRLGKFVQNVNALR-AHPHPPPAV--ALLAYGGEGVYYFLEQFVWLAKA 132

Query: 123 GLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGHLE 182
           GL+       LQ++SAWAE +GY+GSI++K+ ++ +       L +S+++ +    G  E
Sbjct: 133 GLLPAHLLPRLQRLSAWAELLGYVGSITIKLEEIGK-------LESSVKMRLK--EGCRE 192

Query: 183 EEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALISTHK 242
           E + ++ LR K L+K +S+VQD AD  MAL D+ DG G L    L++ AGLLSALIS HK
Sbjct: 193 ESDVVRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHK 242

Query: 243 NWISC 248
           NW SC
Sbjct: 253 NWNSC 242

[Close]

BLAST of MS016807 vs. ExPASy Swiss-Prot
Match: Q10MN3 (Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-2 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49
Identity = 117/259 (45.17%), Postives = 161/259 (62.16%), Query Frame = 0


Query: 2   ASKPPASSAEKH--------RDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSA--VP 61
           A  P +SSA K         RD L H+EAYL++RDGVD LLK+S YA ++ L+ +A   P
Sbjct: 5   AGSPSSSSARKPASRPRLPCRDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQPP 64

Query: 62  ESLALTDRLKSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEI--VLAVVAYGGEGF 121
              A T RL+SFES+VG+SRKAFRLGKFVQ +NALR + +     +  +L ++AYGG+G 
Sbjct: 65  LPHAATARLRSFESSVGLSRKAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYGGQGV 124

Query: 122 YYFVEQFVWLAKSGLIDKR-YSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRA 181
           Y F+EQF WLAK+GL+  R     L +I  WA+ + ++GSI++K+ ++       A L  
Sbjct: 125 YNFLEQFAWLAKAGLLPARLLPRRLHRIGVWAQLLAHVGSIAIKLEEV-------AELEC 184

Query: 182 SIEIAVTRGNGHLEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLI 241
            +E  +  G G  EE E ++ L  K L+K +S+VQD  D  M + D+    G L    L+
Sbjct: 185 GVEARLEEGCG--EESEVVRTLSRKLLLKLMSLVQDMVDSAMTVGDVTGRKGLLGSSTLM 244

Query: 242 SCAGLLSALISTHKNWISC 248
           + AGLLSALIS HKNW SC
Sbjct: 245 ASAGLLSALISVHKNWNSC 254

[Close]

BLAST of MS016807 vs. ExPASy Swiss-Prot
Match: Q01IH3 (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 76/232 (32.76%), Postives = 132/232 (56.90%), Query Frame = 0


Query: 15  DFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRLKSFESTVGVSRKAF 74
           D L+ L  +LAKRDG+DKL+K  +Y +K +   +A   S  L  R K++E++ G+SRKAF
Sbjct: 5   DTLDKLVVFLAKRDGIDKLVKTFQYVSK-LAHWAAESSSPGLAGRAKNWETSAGLSRKAF 64

Query: 75  RLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLAKSGLIDKRYSSSLQ 134
           R G+F+  LN LR +  E      LAV+A  GE  Y+F + F WL++ G++D   +  + 
Sbjct: 65  RTGRFLTGLNGLRRAPGEFG---ALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLARRMS 124

Query: 135 KISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGHLEEEEKMKKLREKK 194
            ISA+ E +GY+  I++ +  + R +  E  L            G  ++++++KK+R  +
Sbjct: 125 FISAFGESVGYVFFIAMDLIMIRRGLRQERKLLR---------EGGKDKDKEVKKIRMDR 184

Query: 195 LMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALISTHKNWIS 247
           +M+ ++   + AD  + +ADI + N   +  + +  +GL+SA    ++NW S
Sbjct: 185 VMRLMATAANVADLVIGIADI-EPNPFCNHAVTLGISGLVSAWAGWYRNWPS 222

[Close]

BLAST of MS016807 vs. ExPASy TrEMBL
Match: A0A6J1CSY1 (peroxisomal membrane protein 11A OS=Momordica charantia OX=3673 GN=LOC111013929 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.8e-131
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL
Sbjct: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA
Sbjct: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH
Sbjct: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
           LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST
Sbjct: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. ExPASy TrEMBL
Match: A0A6J1KIM4 (peroxisomal membrane protein 11A-like OS=Cucurbita maxima OX=3661 GN=LOC111496087 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115
Identity = 212/247 (85.83%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASK P SSAEKHRDF NHLEAYLAKRDGVDKLLKISRYATKIILSSSA+PESL LT RL
Sbjct: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES VGVSRKAFRLGKFVQDLNALRNSHFES+QE+VLA+VAYGGEG YYF+EQF+WL 
Sbjct: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLV 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           K+GLIDKRYSS LQKIS WAEFIGYIGSISLK RD N+I++DEACL+AS++IAV++G+G+
Sbjct: 121 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKL+ KKLMK+LSIVQDFADGFMALADIRDGNGRLSGPL +SCAGLLSALIST
Sbjct: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. ExPASy TrEMBL
Match: A0A6J1GGF4 (peroxisomal membrane protein 11A-like OS=Cucurbita moschata OX=3662 GN=LOC111453970 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.3e-115
Identity = 213/247 (86.23%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASK P SSAEKHRDF NHLEAYLAKRDGVDKLLKISRYATKIILSSSA+PESL LT RL
Sbjct: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES VGVSRKAFRLGKFVQDLNALRNSHFES+QE+VLA+VAYGGEG YYF+EQF+WL 
Sbjct: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLI 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           K+GLIDKRYSS LQKISAWAEFIGYIGSISLK RD N+I++DEA L+AS++IAV++GNG+
Sbjct: 121 KAGLIDKRYSSRLQKISAWAEFIGYIGSISLKFRDFNQIVEDEARLKASMDIAVSKGNGN 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKL+ KKLMK+LSIVQDFADGFMALADIRDGNGRLSGPL +SCAGLLSALIST
Sbjct: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. ExPASy TrEMBL
Match: A0A0A0LL07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361460 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.9e-113
Identity = 212/247 (85.83%), Postives = 227/247 (91.90%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASKPP SS EK RDF NHLEAYLAKRDGVDKLLKISRY TKIILSSSA+ ES  LT RL
Sbjct: 1   MASKPPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTQRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES+VGVSRKAFRLGKF+QDLNALRNSHFES QE +LA++AYGGEGFYYFVEQF+WLA
Sbjct: 61  KSFESSVGVSRKAFRLGKFIQDLNALRNSHFESNQEFLLALLAYGGEGFYYFVEQFIWLA 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           KSGLIDKR+SS LQKISAWAE IGYIGSISLK RDLNRI++DEACL+ASIEIAV RG GH
Sbjct: 121 KSGLIDKRHSSRLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGH 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKLR K+LMK+LSIVQDFADGFMA+AD+RDGNGR SGPLLIS AGLLSALIST
Sbjct: 181 REEEEKMKKLRAKRLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. ExPASy TrEMBL
Match: A0A6J1HDJ4 (peroxisomal membrane protein 11A-like OS=Cucurbita moschata OX=3662 GN=LOC111462618 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.4e-113
Identity = 212/247 (85.83%), Postives = 231/247 (93.52%), Query Frame = 0


Query: 1   MASKPPASSAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDRL 60
           MASK P SS EK RDF NHLEAYLAKRDGVDKLLKISRYATKIILSSSA+PESL LT RL
Sbjct: 1   MASKAPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTHRL 60

Query: 61  KSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLA 120
           KSFES+VGVSRKAFRLGKF+QDLNALRNSHFES+Q+++LA+VAYGGEGFYYF+EQFVWLA
Sbjct: 61  KSFESSVGVSRKAFRLGKFIQDLNALRNSHFESSQQLLLALVAYGGEGFYYFIEQFVWLA 120

Query: 121 KSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGH 180
           KSGLIDKR+S+ LQKISAWAE IGYIGSISLKIRDL RI++DEACL+ASI+IAVTRG+ H
Sbjct: 121 KSGLIDKRHSNHLQKISAWAELIGYIGSISLKIRDLKRILEDEACLKASIDIAVTRGDKH 180

Query: 181 LEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIST 240
            EEEEKMKKL+ KKLMK+LSIVQDFADGFMA ADIRDGNGRLSGPL IS AGL+SALIST
Sbjct: 181 REEEEKMKKLQTKKLMKKLSIVQDFADGFMAAADIRDGNGRLSGPLPISWAGLISALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of MS016807 vs. TAIR 10
Match: AT1G47750.1 (peroxin 11A )

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-91
Identity = 165/248 (66.53%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 1   MASKPPAS-SAEKHRDFLNHLEAYLAKRDGVDKLLKISRYATKIILSSSAVPESLALTDR 60
           MA+K P   +  K RDFLNHLE YL+KRDGVDKLLKISRYATKIIL+SS +PE+ ++  R
Sbjct: 1   MATKAPEKITKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPR 60

Query: 61  LKSFESTVGVSRKAFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWL 120
           LKSFES+VGVSRKAFRLGKFVQD+NALR+S ++S  E+VL ++AYGGEG YYFVEQF+WL
Sbjct: 61  LKSFESSVGVSRKAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWL 120

Query: 121 AKSGLIDKRYSSSLQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNG 180
            KSGLID ++S  LQKISAWAE +GY+GS+S+KIRDL ++ D+E+C+ ++IEI+V+RG  
Sbjct: 121 TKSGLIDAKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLA 180

Query: 181 HLEEEEKMKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALIS 240
              E+EKMK ++EKK +K LSI+QD ADG M +ADIRDG G LS P +IS AGL SA++S
Sbjct: 181 CDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVS 240

Query: 241 THKNWISC 248
           THKNWISC
Sbjct: 241 THKNWISC 248

[Close]

BLAST of MS016807 vs. TAIR 10
Match: AT3G47430.1 (peroxin 11B )

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-22
Identity = 77/240 (32.08%), Postives = 122/240 (50.83%), Query Frame = 0


Query: 15  DFLNHLEAYLAKRDGVDKLLKISRYATKIIL--SSSAVPESLALTDRLKSFESTVGVSRK 74
           D ++ L  +LAKRDG+DKL+K  +Y  K+      +  PE+    DR K +E   G+SRK
Sbjct: 4   DTVDKLVVFLAKRDGIDKLVKTFQYVAKLACWHVEATRPEA---ADRFKKWEVASGLSRK 63

Query: 75  AFRLGKFVQDLNALRNSHFESTQEIVLAVVAYGGEGFYYFVEQFVWLAKSGLIDKRYSSS 134
           AFR G+ +   NALR +   +     LAV+A  GE  Y+F + F+WL++ G ID + +  
Sbjct: 64  AFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKK 123

Query: 135 LQKISAWAEFIGYIGSISLKIRDLNRIIDDEACLRASIEIAVTRGNGHLEEE------EK 194
           +  ISA+ E  GY   I         IID   C+     +   +   H  +E       K
Sbjct: 124 MSFISAFGESFGYTFFI---------IID---CIFIKQRLKSLKKLQHSTDEPKEEIGAK 183

Query: 195 MKKLREKKLMKELSIVQDFADGFMALADIRDGNGRLSGPLLISCAGLLSALISTHKNWIS 247
           + ++R   +M+ + I  + AD  +ALA+I   N   +  + +  +GL+SA    ++NW S
Sbjct: 184 ISEIRGDIVMRLMGISANVADLLIALAEIHP-NPFCNHTITLGISGLVSAWAGWYRNWPS 227

The following BLAST results are available for this feature:

BLAST of MS016807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144177.1	3.7e-131	100.00	peroxisomal membrane protein 11A [Momordica charantia]	[more]
XP_023002137.1	3.7e-115	85.83	peroxisomal membrane protein 11A-like [Cucurbita maxima] >XP_023002138.1 peroxis...	[more]
XP_022950993.1	1.1e-114	86.23	peroxisomal membrane protein 11A-like [Cucurbita moschata]	[more]
XP_023537452.1	9.2e-114	84.62	peroxisomal membrane protein 11A-like [Cucurbita pepo subsp. pepo]	[more]
XP_004152708.1	6.0e-113	85.83	peroxisomal membrane protein 11A [Cucumis sativus] >KGN62580.1 hypothetical prot...	[more]

BLAST of MS016807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZF1	1.9e-90	66.53	Peroxisomal membrane protein 11A OS=Arabidopsis thaliana OX=3702 GN=PEX11A PE=1 ...	[more]
A2XFQ8	1.0e-59	52.24	Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica OX=39946 GN=PEX1...	[more]
Q10MN2	1.0e-59	52.24	Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PE...	[more]
Q10MN3	1.3e-49	45.17	Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PE...	[more]
Q01IH3	1.3e-25	32.76	Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica OX=39946 GN=PEX1...	[more]

BLAST of MS016807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSY1	1.8e-131	100.00	peroxisomal membrane protein 11A OS=Momordica charantia OX=3673 GN=LOC111013929 ...	[more]
A0A6J1KIM4	1.8e-115	85.83	peroxisomal membrane protein 11A-like OS=Cucurbita maxima OX=3661 GN=LOC11149608...	[more]
A0A6J1GGF4	5.3e-115	86.23	peroxisomal membrane protein 11A-like OS=Cucurbita moschata OX=3662 GN=LOC111453...	[more]
A0A0A0LL07	2.9e-113	85.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361460 PE=3 SV=1	[more]
A0A6J1HDJ4	6.4e-113	85.83	peroxisomal membrane protein 11A-like OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]

BLAST of MS016807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47750.1	1.4e-91	66.53	peroxin 11A	[more]
AT3G47430.1	4.0e-22	32.08	peroxin 11B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008733	Peroxisomal biogenesis factor 11	PFAM	PF05648	PEX11	coord: 17..244 e-value: 7.9E-45 score: 153.0
None	No IPR available	PANTHER	PTHR12652	PEROXISOMAL BIOGENESIS FACTOR 11	coord: 9..247
None	No IPR available	PANTHER	PTHR12652:SF50	PEROXISOMAL MEMBRANE PROTEIN 11A	coord: 9..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016807.1	MS016807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016559	peroxisome fission
cellular_component	GO:0005779	integral component of peroxisomal membrane