MS016724 (gene) Bitter gourd (TR) v1

Overview


Name	MS016724
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mitochondrial inner membrane protease subunit 2
Location	scaffold563: 350978 .. 352428 (-)
RNA-Seq Expression	MS016724
Synteny	MS016724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATCGGAGTTTAGTGTGGGGCGTTGCGAAGAAATGTTTCACATTTGGGATTATAGGCGTTACTGTTTCAGATCGTTATGCAAGTATTGTCCCTCTCCGGGGCGCTTCAATGTCTCCCACTTTCAACCCTAGAGCGACTTCTCAGGCGGGTGCAGTTACTGGTAATTTTCTGAACGAACCATTTTTGTAGTAGCAGGAATTGGGTACCATCTGATGCTTGGGTTTGGGTTCAGGTGACTACGTACTGGTTGAGAAATTTTGCCTTGAGAAGTACAAGTTTTCTCCTGGTGACGTGATCGTTTACTGGTTAGTTTCCCTCCATCGCTGTTAATATAGTCATCTGTATTGTGTTGTTCTGAACGTTTATCTTGTGTTTTGTGGTATTAGTTTTGAATTTCAATGTAGGCAAGATAATTTATCTGGGTTGGCCCTTCTTGATTGAATTTTGATCATAAGTAGTCTGTACATCCACTTGATTAAACATTTCACGTGTAGTGGACATATCACATTCAAACTCCCATTTATTAACTTCCCAATGCCATACATATGAAAATTAAAAATAAACAGAGAACTGGAAAATTAGAAGAGCTCAACCATGACTTTCATATTGGTTATTCTCTGTGAAAGAACCGAATACTGTGTCATAGGTCCTTAGTCATACTTAATCGATCTATCTCAAATTGTACGTAAATTGCTTTTACTTTTTTTTTTAATTTAAAGCAACGTTGAGATCATAAAATGTTTTTCTCACCTAGATTATATGTTTATACTAGAGAAACGCAGAACATTGTCATTTTTACAGTCTTGTTTCTTGCAAAATGTTTTTGATCCACACTTCCTAACTTGTCACAAGTTTACTACTCTCAGATGCTTGAGCAATTTGTATAAATTTTTTCCTCCGGACGTTGTTGATCTATTGCAGCTCCCCTAGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTAAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGCGATAACGCAGAATGCAGCATGGACTCGAGATCTTTTGGCCCAGTAAGATACCATCTACTTAGTTAGCATAGCATTGTGCTTCTTTTTGGGTGTTCTGTAGCGTCATACTTTTCAATGTTTAAAACTAAGTTACCGTATGAAGTAGCATTTTCAGCATAAACTCAAATATCATTTTCATGAAATGTTTTAGTGAAAAATTCTGACCTTTCTGAGTGCAACTCCTCTGTTGATGGATGTTTTATGCTTTTTACTTGACATGCCTGATCCAGCCTGACTGATGTAAGCTTTTTGCTTGCAGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTCGAGAGAAAATATCCTCAGGGGAGAATTAAGTCC

mRNA sequence

ATGGCTAATCGGAGTTTAGTGTGGGGCGTTGCGAAGAAATGTTTCACATTTGGGATTATAGGCGTTACTGTTTCAGATCGTTATGCAAGTATTGTCCCTCTCCGGGGCGCTTCAATGTCTCCCACTTTCAACCCTAGAGCGACTTCTCAGGCGGGTGCAGTTACTGGTGACTACGTACTGGTTGAGAAATTTTGCCTTGAGAAGTACAAGTTTTCTCCTGGTGACGTGATCGTTTACTGCTCCCCTAGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTAAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGCGATAACGCAGAATGCAGCATGGACTCGAGATCTTTTGGCCCAATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTCGAGAGAAAATATCCTCAGGGGAGAATTAAGTCC

Coding sequence (CDS)

ATGGCTAATCGGAGTTTAGTGTGGGGCGTTGCGAAGAAATGTTTCACATTTGGGATTATAGGCGTTACTGTTTCAGATCGTTATGCAAGTATTGTCCCTCTCCGGGGCGCTTCAATGTCTCCCACTTTCAACCCTAGAGCGACTTCTCAGGCGGGTGCAGTTACTGGTGACTACGTACTGGTTGAGAAATTTTGCCTTGAGAAGTACAAGTTTTCTCCTGGTGACGTGATCGTTTACTGCTCCCCTAGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTAAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGCGATAACGCAGAATGCAGCATGGACTCGAGATCTTTTGGCCCAATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTCGAGAGAAAATATCCTCAGGGGAGAATTAAGTCC

Protein sequence

MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS

Homology

[Close]

BLAST of MS016724 vs. NCBI nr
Match: XP_022145503.1 (mitochondrial inner membrane protease subunit 2 [Momordica charantia])

HSP 1 Score: 361.3 bits (926), Expect = 4.5e-96
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL
Sbjct: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS
Sbjct: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 169

[Close]

BLAST of MS016724 vs. NCBI nr
Match: XP_022971541.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita maxima] >XP_022971544.1 mitochondrial inner membrane protease subunit 2 [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 3.5e-88
Identity = 153/169 (90.53%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVW VA+KCFT GIIGVTVSDRYAS+VP+RGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVARKCFTLGIIGVTVSDRYASVVPIRGASMSPTFNPRATSPAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVY SPSNYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGR+KS
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRVKS 169

[Close]

BLAST of MS016724 vs. NCBI nr
Match: KAG7027898.1 (Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87
Identity = 152/169 (89.94%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVW VAKKCFT GIIGVT+SDRYAS+VP+RGASMSPTFNPRATS AG V+ DYVL
Sbjct: 454 MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 513

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVY SPSNYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 514 VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 573

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVER YPQGR+KS
Sbjct: 574 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKS 622

[Close]

BLAST of MS016724 vs. NCBI nr
Match: XP_023538829.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >XP_023538830.1 mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >KAG6596348.1 Mitochondrial inner membrane protease subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87
Identity = 152/169 (89.94%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVW VAKKCFT GIIGVT+SDRYAS+VP+RGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVY SPSNYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVER YPQGR+KS
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKS 169

[Close]

BLAST of MS016724 vs. NCBI nr
Match: XP_022948770.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita moschata] >XP_022948779.1 mitochondrial inner membrane protease subunit 2 [Cucurbita moschata] >XP_022948786.1 mitochondrial inner membrane protease subunit 2 [Cucurbita moschata])

HSP 1 Score: 331.3 bits (848), Expect = 5.0e-87
Identity = 151/169 (89.35%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVW VAKKCFT GIIGVT+SDRYAS+VP+RGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCL+K++FSPGDVIVY SPSNYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLDKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVER YPQGR+KS
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKS 169

[Close]

BLAST of MS016724 vs. ExPASy Swiss-Prot
Match: Q6AZD4 (Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-28
Identity = 60/150 (40.00%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 20  IGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VTV DR A +  + GASM P+ NP      G  + D VL+ ++ +  Y    GD++  
Sbjct: 24  VTVTVLDRLAYVARVEGASMQPSLNP-----DGESSPDVVLLNRWSVRNYHVQRGDIVSV 83

Query: 80  CSPSNYKEKHVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+I + GD++   G +  Y  V+VP+GH W+EGD+   S DS +FGP+
Sbjct: 84  LSPKNPQQKIIKRVIGIEGDFIKTLGYKNRY--VRVPDGHLWIEGDHHGHSFDSNAFGPV 143

Query: 140 PMGLIQGRVSHIVWPPQRIGAVERKYPQGR 167
            +GL+ GR SHI+WPP R   +E   P  R
Sbjct: 144 SLGLVHGRASHIIWPPSRWQRIEPSVPPDR 166

[Close]

BLAST of MS016724 vs. ExPASy Swiss-Prot
Match: Q2KI92 (Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 20  IGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A +  + GASM P+ NP      G+ + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGASMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVQRGDIVSL 84

Query: 80  CSPSNYKEKHVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD V   G +  Y  VKVP GH WVEGD+   S DS SFGP+
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVKTMGHKNRY--VKVPRGHIWVEGDHHGHSFDSNSFGPV 144

Query: 140 PMGLIQGRVSHIVWPPQRIGAVERKYPQGRI 168
            +GL+    +HI+WPP+R   +E   P  R+
Sbjct: 145 SLGLLHAHATHILWPPKRWQKLESVLPPERL 168

[Close]

BLAST of MS016724 vs. ExPASy Swiss-Prot
Match: Q96T52 (Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2L PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 20  IGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A +  + GASM P+ NP      G+ + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGASMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVHRGDIVSL 84

Query: 80  CSPSNYKEKHVKRIIALPGD---WVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD    +G +  Y  VKVP GH WVEGD+   S DS SFGP+
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVRTIGHKNRY--VKVPRGHIWVEGDHHGHSFDSNSFGPV 144

Query: 140 PMGLIQGRVSHIVWPPQRIGAVERKYPQGRI 168
            +GL+    +HI+WPP+R   +E   P  R+
Sbjct: 145 SLGLLHAHATHILWPPERWQKLESVLPPERL 168

[Close]

BLAST of MS016724 vs. ExPASy Swiss-Prot
Match: Q8BPT6 (Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp2l PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26
Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 0


Query: 20  IGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A +  + G+SM P+ NP      G+ + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGSSMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVQRGDIVSL 84

Query: 80  CSPSNYKEKHVKRIIALPGDWVGT-RQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPM 139
            SP N ++K +KR+IAL GD V T      +VKVP GH WVEGD+   S DS SFGP+ +
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHHGHSFDSNSFGPVSL 144

Query: 140 GLIQGRVSHIVWPPQRIGAVERKYPQGR 167
           GL+    +HI+WPP+R   +E   P  R
Sbjct: 145 GLLHAHATHILWPPERWQRLESVLPPER 167

[Close]

BLAST of MS016724 vs. ExPASy Swiss-Prot
Match: Q5PQ63 (Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=immp2l PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.4e-25
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 20  IGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A I  + G SM P+ NP A  ++     D VL+ ++    Y    GD++  
Sbjct: 22  VTVTFLDRVACIARVEGVSMQPSLNPDARGES-----DIVLLNRWRARNYDVQRGDIVSL 81

Query: 80  CSPSNYKEKHVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD V   G +  Y  VKVP GH WVEGD+   S DS +FGP+
Sbjct: 82  VSPKNPEQKIIKRVIALEGDIVKTLGHKNRY--VKVPRGHVWVEGDHHGHSFDSNAFGPV 141

Query: 140 PMGLIQGRVSHIVWPPQR 155
            +GL+    +HI+WPP R
Sbjct: 142 SLGLLHSHATHILWPPNR 152

[Close]

BLAST of MS016724 vs. ExPASy TrEMBL
Match: A0A6J1CW41 (Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 GN=LOC111014939 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.2e-96
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL
Sbjct: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS
Sbjct: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 169

[Close]

BLAST of MS016724 vs. ExPASy TrEMBL
Match: A0A6J1I8V8 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111470229 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 153/169 (90.53%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVW VA+KCFT GIIGVTVSDRYAS+VP+RGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVARKCFTLGIIGVTVSDRYASVVPIRGASMSPTFNPRATSPAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVY SPSNYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGR+KS
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRVKS 169

[Close]

BLAST of MS016724 vs. ExPASy TrEMBL
Match: A0A6J1GA60 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452339 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87
Identity = 151/169 (89.35%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANRSLVW VAKKCFT GIIGVT+SDRYAS+VP+RGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCL+K++FSPGDVIVY SPSNYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLDKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 170
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVER YPQGR+KS
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKS 169

[Close]

BLAST of MS016724 vs. ExPASy TrEMBL
Match: A0A0A0LFB4 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G731770 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 148/165 (89.70%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANR+LVW V KK FTFGIIGVT+SDRYAS+VP+RGASMSPTFNP ATS  G +TGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVY SP NYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQG 166
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQG
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 165

[Close]

BLAST of MS016724 vs. ExPASy TrEMBL
Match: A0A1S3B5N7 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486302 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 148/165 (89.70%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           MANR+LVW V KK FTFGIIGVT+SDRYAS+VP+RGASMSPTFNP ATS  G +TGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVY SP NYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQG 166
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQG
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 165

[Close]

BLAST of MS016724 vs. TAIR 10
Match: AT3G08980.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-54
Identity = 91/160 (56.88%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60
           M  ++++W VAKK FT  IIG+T+SDR  S+VP+RG SMSPTFNP    Q  +   DYVL
Sbjct: 1   MGIQNILWQVAKKSFTGSIIGLTISDRCCSVVPVRGDSMSPTFNP----QRNSYLDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           V+KFCL+ YKF+ GDV+V+ SP+++ ++++KRI+ +PG+W+ + +  DV++VPEGHCWVE
Sbjct: 61  VDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGEWISSSR--DVIRVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVER 161
           GDN   S+DSRSFGPIP+GLIQGRV+ ++WPPQRI  + R
Sbjct: 121 GDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRISKIGR 154

[Close]

BLAST of MS016724 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-20
Identity = 56/146 (38.36%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 24  VSDRY-ASIVPLRGASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVYCSP 83
           V+DRY  S   + G SM PT N         +TGD +L E       K   GDV++  SP
Sbjct: 35  VTDRYIISTTHVHGPSMLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSP 94

Query: 84  SNYKEKHVKRIIALPGDWVGTRQTYDV----------VKVPEGHCWVEGDNAECSMDSRS 143
            + K    KRI+ L GD    R T+            V VP+GH W++GDN   S DSR 
Sbjct: 95  RDPKRMVTKRILGLEGD----RLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRH 154

Query: 144 FGPIPMGLIQGRVSHIVWPPQRIGAV 159
           FGP+P  LI+G+    VWPP+  G++
Sbjct: 155 FGPVPYSLIEGKALLRVWPPEYFGSL 167

[Close]

BLAST of MS016724 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.0e-18
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 36  GASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIA 95
           G SM+PT +P         +G+ +L E+      K S GD++V  SP N  +  +KR+I 
Sbjct: 45  GPSMTPTLHP---------SGNVLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVIG 104

Query: 96  LPGDWVG----TRQTYD--VVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHIV 155
           + GD +     +R++ +   + VP+GH +V+GD    S DSR+FG +P GLIQGRV   V
Sbjct: 105 IEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLIQGRVLWRV 162

Query: 156 WPPQRIG 157
           WP Q  G
Sbjct: 165 WPFQDFG 162

[Close]

BLAST of MS016724 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.0e-18
Identity = 49/130 (37.69%), Postives = 65/130 (50.00%), Query Frame = 0


Query: 39  MSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPG 98
           M PT N         +TGD +L E       K   GDV++  SP + K    KRI+ L G
Sbjct: 1   MLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEG 60

Query: 99  DWVGTRQTYDV----------VKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHI 158
           D    R T+            V VP+GH W++GDN   S DSR FGP+P  LI+G+    
Sbjct: 61  D----RLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLR 117

[Close]

BLAST of MS016724 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-16
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 36  GASMSPTFNPRATSQAGAVTGDYVLVEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIA 95
           G SM PT +P         +G+ +L E+      K S GD++V  SP N  +  +KR++ 
Sbjct: 45  GPSMIPTLHP---------SGNMLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVVG 104

Query: 96  LPGDWVG------TRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRV 146
           + GD +              + VP+GH +V+GD    S DSR+FGP+P GLIQGRV
Sbjct: 105 VEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLIQGRV 151

The following BLAST results are available for this feature:

BLAST of MS016724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145503.1	4.5e-96	100.00	mitochondrial inner membrane protease subunit 2 [Momordica charantia]	[more]
XP_022971541.1	3.5e-88	90.53	mitochondrial inner membrane protease subunit 2 [Cucurbita maxima] >XP_022971544...	[more]
KAG7027898.1	2.3e-87	89.94	Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023538829.1	2.3e-87	89.94	mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022948770.1	5.0e-87	89.35	mitochondrial inner membrane protease subunit 2 [Cucurbita moschata] >XP_0229487...	[more]

BLAST of MS016724 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AZD4	3.2e-28	40.00	Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l...	[more]
Q2KI92	1.0e-26	40.40	Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L ...	[more]
Q96T52	1.0e-26	39.74	Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2...	[more]
Q8BPT6	3.0e-26	39.86	Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp...	[more]
Q5PQ63	7.4e-25	42.03	Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=imm...	[more]

BLAST of MS016724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW41	2.2e-96	100.00	Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I8V8	1.7e-88	90.53	Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GA60	2.4e-87	89.35	Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LFB4	4.3e-84	89.70	Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3B5N7	4.3e-84	89.70	Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS016724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08980.1	2.1e-54	56.88	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.1	3.3e-20	38.36	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	4.0e-18	38.58	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.2	9.0e-18	37.69	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G23465.1	6.5e-16	37.07	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 27..43 score: 26.47 coord: 89..101 score: 54.76 coord: 112..131 score: 52.86
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 27..163 e-value: 3.0E-29 score: 103.6
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 110..150 e-value: 1.1E-8 score: 35.2 coord: 12..105 e-value: 1.1E-12 score: 48.3
IPR019533	Peptidase S26	CDD	cd06530	S26_SPase_I	coord: 30..145 e-value: 4.67389E-22 score: 82.6335
IPR037730	Mitochondrial inner membrane protease subunit 2	PANTHER	PTHR46041	MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2	coord: 2..167
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 33..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016724.1	MS016724.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006627	protein processing involved in protein targeting to mitochondrion
biological_process	GO:0006508	proteolysis
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016020	membrane
cellular_component	GO:0042720	mitochondrial inner membrane peptidase complex
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity