MS016693 (gene) Bitter gourd (TR) v1

Overview


Name	MS016693
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-CH-type domain-containing protein
Location	scaffold563: 136889 .. 139000 (-)
RNA-Seq Expression	MS016693
Synteny	MS016693

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGACTCCTGAAGTGTCCCAGTCCGACATTGATTTGGAGCAGGGGAATCATCGCCGGTCCGTCAGCGGTAGTGACGTGAGCGCCGATTGTAGCGTCTACTTCTCCGACGCCGACGAGGGTTCGTGCTATTCTCAGTTCTTTTCGACCAACGGTGGTTCCTACGATGAGTATAGGTTCGCTTTCGTCGCTCAGCCGGAGGTTGGGGTCGTTTCGGATTCCCGGCGAGTTTCATCGGTTTCCGATCGTTCGGTGGAGGTTGAGAATGAAAATGGGATTACTGAAATTAAGGTGCATTTGGCTAAAGTAGAGAGAGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAGGAGTCTGGAATCCCAATCGAATTGGGCTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTTAAAATCAGAGGAAATAAGTGAGTCTAATCCCTGTTTTCATTAGTAAGTTTGATGATTTTTCCATGGACTCTGATCGTTTTTCACTCATGTTATGCCTTGATAGTTCTTTGAGTTCTTATTTTCTTGCTGCTGTACTTTGGTCTGTTCTTGTGATAATCATCTTCTGTCTGCGATATCCTCATGGGTTGGACTATTCAGAAATTTGAATGGAAGAGAGATGAATTTGGTAACCTTGACCTCTTTTAAGCTTTAAGGCAAATTCCTTAGCGTAATGAGCTTTTGAGGTTGCAGACTTAAGGATGCTTACTTAGAGGGACACCTTAGATGTACAAAAAGAAATAAGAGTAAAGCATAAGAAAGAGCATATATATATCTCCAAGCAAGTTACACTTATTATTCCTTCTTCCTTGTCCCTTTTCTGAGAATCTCTCTCTCTGCCCTCCCAAAAGTGGATAGTCCATTGCTATTCTGGTCCATAATTCAGTTGAAGTGGGGAAAGGTTATAAATCTCTCAGCTGATCACTTTAAGATATCTAGTTTTCTGTGTTCATATGCCTAATTTGCAGTTTACCCAACTTGTTTGGTCACAATTATCTCTTATTCTCATGAACCAACATATCCAAATGGCAGTACTTCTTGTGCTACCCAGCTGTTGTTTCCATCTAGTAAGCATATTGAACATGCTTTGTTTCAGTACACTTCTAATGGATGGAATCATCAAATTTATTTCTCATCAAGCTGATTCATACCCTTGATCTAACTCTCCTAACTGTTGCAATTGTATTTCTTCTAATTAGCTTGACTTGATCCAAATCCAATTAACTCGTTGAAGTTTCTCTGCACTGAGCTGCTCTATAACCTTAATTCTGTCAATAACCTTAATTCTGTCATACTTATTAGATTCTGAGAAAATAATGTTTTGGTGTCTGTCGAATTACATATATTTGGTGTTATATATGTAGTATAGCCAAAGAAAGCTATGCATGTATCAGTAAAGCTGTAAAAATGCAAGGATGAGGTTATGCACTTGTTGTGGAAGCAAGATGATCAATACTTCACTTGATCTTAAGATTACTTTTCAATATCAATAATGAATAGAATATGTCAACTTGATCTTAAGGGTGGTTGGTTTGTTAATCACTGAGAAATGAACAGTAGATCTGTTCTTGGACTTGGCTCTACATTTCATCGATAAATGTCTTGACTCGACTCAGCAAAAGGTTCCTAAGTATCGTTCCTTGACATATATTCTGAACTTGGGAGATTGTACAATCTTCAATCAATTGCTTATAAGTGAACAGGGCATTTTACACCTTGTGCTTGTTGTGTTGATCTTTCTTTAATTTCTGGTTGATGTTTGAGGATGGAACAGGGCATTTTGCATAGTTGTTCCTTTGGCTACTTTATTTATTCCTAATCCTCTTGAATCTTATTAGGACGTGTGAGATATGTCATTCCATTGCACGAAACATTCTCGGACCACATGAGGTTGAGTTGACAGAGCAATCTACTGAATCCAACAACGCGTCCTCGACAGCTGCAGTTGCTGCATCAATTCCTTCATCAGACAGCCAAAGCTTCTGGCGTGGCCACCGGTTTCTGAATTTTCTTCTTGCTTGTATGGTATTTGCTTTCGTTATATCATGGCTATTCCACTTCAACGTGCCTTCG

mRNA sequence

ATGCCGACTCCTGAAGTGTCCCAGTCCGACATTGATTTGGAGCAGGGGAATCATCGCCGGTCCGTCAGCGGTAGTGACGTGAGCGCCGATTGTAGCGTCTACTTCTCCGACGCCGACGAGGGTTCGTGCTATTCTCAGTTCTTTTCGACCAACGGTGGTTCCTACGATGAGTATAGGTTCGCTTTCGTCGCTCAGCCGGAGGTTGGGGTCGTTTCGGATTCCCGGCGAGTTTCATCGGTTTCCGATCGTTCGGTGGAGGTTGAGAATGAAAATGGGATTACTGAAATTAAGGTGCATTTGGCTAAAGTAGAGAGAGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAGGAGTCTGGAATCCCAATCGAATTGGGCTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTTAAAATCAGAGGAAATAAGACGTGTGAGATATGTCATTCCATTGCACGAAACATTCTCGGACCACATGAGGTTGAGTTGACAGAGCAATCTACTGAATCCAACAACGCGTCCTCGACAGCTGCAGTTGCTGCATCAATTCCTTCATCAGACAGCCAAAGCTTCTGGCGTGGCCACCGGTTTCTGAATTTTCTTCTTGCTTGTATGGTATTTGCTTTCGTTATATCATGGCTATTCCACTTCAACGTGCCTTCG

Coding sequence (CDS)

ATGCCGACTCCTGAAGTGTCCCAGTCCGACATTGATTTGGAGCAGGGGAATCATCGCCGGTCCGTCAGCGGTAGTGACGTGAGCGCCGATTGTAGCGTCTACTTCTCCGACGCCGACGAGGGTTCGTGCTATTCTCAGTTCTTTTCGACCAACGGTGGTTCCTACGATGAGTATAGGTTCGCTTTCGTCGCTCAGCCGGAGGTTGGGGTCGTTTCGGATTCCCGGCGAGTTTCATCGGTTTCCGATCGTTCGGTGGAGGTTGAGAATGAAAATGGGATTACTGAAATTAAGGTGCATTTGGCTAAAGTAGAGAGAGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAGGAGTCTGGAATCCCAATCGAATTGGGCTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTTAAAATCAGAGGAAATAAGACGTGTGAGATATGTCATTCCATTGCACGAAACATTCTCGGACCACATGAGGTTGAGTTGACAGAGCAATCTACTGAATCCAACAACGCGTCCTCGACAGCTGCAGTTGCTGCATCAATTCCTTCATCAGACAGCCAAAGCTTCTGGCGTGGCCACCGGTTTCTGAATTTTCTTCTTGCTTGTATGGTATTTGCTTTCGTTATATCATGGCTATTCCACTTCAACGTGCCTTCG

Protein sequence

MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTESNNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS

Homology

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BLAST of MS016693 vs. NCBI nr
Match: XP_022145623.1 (uncharacterized protein LOC111015024 isoform X2 [Momordica charantia])

HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. NCBI nr
Match: XP_038904640.1 (uncharacterized protein LOC120090971 [Benincasa hispida])

HSP 1 Score: 443.7 bits (1140), Expect = 9.5e-121
Identity = 220/231 (95.24%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFV+QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASST  VAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. NCBI nr
Match: XP_004137745.1 (uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical protein Csa_002551 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 8.0e-120
Identity = 219/231 (94.81%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFV+QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASST  VAASIPSSDSQSFW GHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. NCBI nr
Match: XP_008442485.1 (PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 218/231 (94.37%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFV+QPEVGVV DSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASST  VAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. NCBI nr
Match: XP_023538705.1 (uncharacterized protein LOC111799566 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.7 bits (1101), Expect = 3.2e-116
Identity = 212/232 (91.38%), Postives = 222/232 (95.69%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M  P+VSQSDIDLEQG+HRRSVSGS++SADCSVYFSDADEGSCYSQF+STNGGSYDEYRF
Sbjct: 1   MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  AFVAQPEVG-VVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQ 120
           AFV+QP VG VVSDSRR+SS SDRSVEVENENGITEIKVHL KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTE 180
           ESGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHS+ARNILGP+EVE TEQS E
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

Query: 181 SNNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           SNNASST AVAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 SNNASSTTAVAASIPSSDSPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232

[Close]

BLAST of MS016693 vs. ExPASy TrEMBL
Match: A0A6J1CWG7 (uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 8.6e-128
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.9e-120
Identity = 219/231 (94.81%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFV+QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASST  VAASIPSSDSQSFW GHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.6e-120
Identity = 218/231 (94.37%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFV+QPEVGVV DSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASST  VAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of MS016693 vs. ExPASy TrEMBL
Match: A0A6J1CX83 (uncharacterized protein LOC111015024 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.6e-116
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120
           AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLA 214
           NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLA
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLA 213

[Close]

BLAST of MS016693 vs. ExPASy TrEMBL
Match: A0A6J1FUW7 (uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC111447072 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.4e-116
Identity = 211/232 (90.95%), Postives = 222/232 (95.69%), Query Frame = 0


Query: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M  P+VSQSDIDLEQG+HRRSVSGS++SADCSVYFSDADEGSCYSQF+STNGGSYDEYRF
Sbjct: 1   MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  AFVAQPEVG-VVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQ 120
           AFV+QP VG VVSDSRR+SS SDRSVEVENENGITEIKVHL KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTE 180
           ESGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHS+ARNILGP+EVE TEQS E
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

Query: 181 SNNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           SNNASST AVAASIPSSD+ SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 SNNASSTTAVAASIPSSDTPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232

[Close]

BLAST of MS016693 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 208.0 bits (528), Expect = 8.2e-54
Identity = 102/179 (56.98%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 53  GSYDEYRFAFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHL 112
           G  +  R +   + E  +V D  R S+ S  SVE++ E G+ E  VHL++ ERDCRICH+
Sbjct: 25  GDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHM 84

Query: 113 GLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVE 172
            L++ + ESG+PIELGCSCK DLAAAHKHCAETWFKI+GNK CE+C SIA N++G  EVE
Sbjct: 85  SLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVE 144

Query: 173 LTEQSTESNNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
             E   E+N   +     +     + +SFW+GHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 145 SEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of MS016693 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46
Identity = 115/230 (50.00%), Postives = 145/230 (63.04%), Query Frame = 0


Query: 9   SDIDLEQGN----HRRSVSGSDVSADCSVYFSDA-DEGSCYSQFFSTNGGSYDEYRFAFV 68
           +DIDLEQG     HRRS+ GSDV    SVY+SD  D  SCYS F+ST GGSY EY     
Sbjct: 3   TDIDLEQGGAFGYHRRSLDGSDV----SVYYSDGEDVMSCYSYFYSTTGGSY-EYE---- 62

Query: 69  AQPEVGVVSDSRRVSSV-SDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQESG 128
                     SR+VSSV S  S E+++++         A  E+DCRICHLG+E++    G
Sbjct: 63  -------GDQSRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GG 122

Query: 129 IPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHE-VELTEQSTESN 188
             IELGCSCKDDLA AH+ CAETWFKI+G+KTCEIC S+ARN+ G +E V  T +  E  
Sbjct: 123 GAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELR 182

Query: 189 NASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           N   TAA      ++  ++ W+  R +N +LACMVF F ISW+FHF+V S
Sbjct: 183 NGEETAAGEGG-GATVVENRWQPQRVVNLVLACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of MS016693 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 9.7e-39
Identity = 102/231 (44.16%), Postives = 123/231 (53.25%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSC-YSQFFSTNGGSY-DEYRFAFVAQP 68
           S IDLE G+  R    SDVS +        D  SC Y   F +   S+  E+  A     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIADDLDD 66

Query: 69  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQESGIPIE 128
           E    +D+  V+S S R                    E+DCRICHLGLES+  E G P+ 
Sbjct: 67  E----TDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMV 126

Query: 129 LGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNI------LGPHEVELTEQSTES 188
           LGCSCKDDL   HK CA+TWFKI+GNKTCEIC SIA+N       +G   VE      E+
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEA 186

Query: 189 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
            N  +  A +     SD +   RG+RFLNFLL CMV AFVISW FHFN+PS
Sbjct: 187 GNTPTMVATS----DSDDRRLCRGNRFLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of MS016693 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-30
Identity = 70/158 (44.30%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 105 RDCRICHLGLESNSQES-------------------------------GIPIELGCSCKD 164
           RDCRICHL LE+N +                                 G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 165 DLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTESNNAS--STAAVAA 224
           DL  AH  CAETWFKI+GN TCEIC ++A N+ G       EQS   + AS  S AA   
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAAGQ 198

Query: 225 SIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNV 230
           S+  ++ +  W G   +NFLLA MVFAFV+SWLFHF V
Sbjct: 199 SLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of MS016693 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18
Identity = 61/147 (41.50%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSC-YSQFFSTNGGSY-DEYRFAFVAQP 68
           S IDLE G+  R    SDVS +        D  SC Y   F +   S+  E+  A     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIADDLDD 66

Query: 69  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQESGIPIE 128
           E    +D+  V+S S R                    E+DCRICHLGLES+  E G P+ 
Sbjct: 67  E----TDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMV 124

Query: 129 LGCSCKDDLAAAHKHCAETWFKIRGNK 154
           LGCSCKDDL   HK CA+TWFKI+GNK
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of MS016693 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145623.1	1.8e-127	100.00	uncharacterized protein LOC111015024 isoform X2 [Momordica charantia]	[more]
XP_038904640.1	9.5e-121	95.24	uncharacterized protein LOC120090971 [Benincasa hispida]	[more]
XP_004137745.1	8.0e-120	94.81	uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical ...	[more]
XP_008442485.1	1.4e-119	94.37	PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo]	[more]
XP_023538705.1	3.2e-116	91.38	uncharacterized protein LOC111799566 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS016693 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS016693 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWG7	8.6e-128	100.00	uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LAC9	3.9e-120	94.81	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A1S3B5A7	6.6e-120	94.37	uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=...	[more]
A0A6J1CX83	2.6e-116	100.00	uncharacterized protein LOC111015024 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FUW7	3.4e-116	90.95	uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]

BLAST of MS016693 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	8.2e-54	56.98	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	2.8e-46	50.00	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	9.7e-39	44.16	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.8e-30	44.30	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	1.9e-18	41.50	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 106..159 e-value: 3.4E-17 score: 73.1
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 107..158 e-value: 1.7E-9 score: 37.6
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 99..165 score: 18.146574
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 94..165 e-value: 2.9E-14 score: 54.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 8..231
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 8..231
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 107..159 e-value: 1.21062E-11 score: 56.1816
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016693.1	MS016693.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding