MS016608 (gene) Bitter gourd (TR) v1

Overview


Name	MS016608
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RNase H domain-containing protein
Location	scaffold442: 258625 .. 264743 (+)
RNA-Seq Expression	MS016608
Synteny	MS016608

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATCCCAATGCAACGATCTACAAAGGGTATCACTTATCTAAAGAAGCAGAGCAGTACCTTGCGTCACATGGACTTCAGAGTGCGACTTACTCTATAAGTGCTGCCAATGTGACAGAGGATTTATTTGGCAAACTACTTGCTTGCACTCATGAGGTTGGAGATAACACATTTTATGTTAAAGAACATCTAATTATTTTCATTATTTTGTACTGGACTTTTACTTAAATTCTGATCAGTTGCTTGTAGATCATGTTGACCTTTTATCTAAAGGCATAAAATGAGTTTGTTTGGTCAAAGAATCTTGCCTGCTTTCTTTTTCCTTTCTAATTTTTGTTTTTATGAAACTTGCAGAATTATTAAGCTTGAATGGTGCAACTTCATTTTTGATTTATCATATTCTTGAATGAATTGGATATTGAACCAACATAGTGGTCAGAGTTAAAAATTCTGCTACTGATTGAAACATATTTGTATTTTCCTCAGCAACCATCTTCTTATAGAGGACAAACTACTGAAGAGCGCTCAGCTAAGAGACCACACCAAGTTCATGGGGCTAATGAATATGTAAGTCGGTCTACCTTTTTATTTTTTATTTTAAGAAACATTTTCATGGATGATATGAAATAATAAAAATTATTTTACTTCCATAGAGCATTATGATTATCGAAAGAATGGCACGTCCAGGATTCACGTGGCTGTTGTTGACTTAGGATTTGTTTTACTTCCTTTACTCAAGTGGGCAGATTTTGTTGGTTTCTATTTTCCTGTCTGCTTAAACTAGTTAATTGAAGTTTAAATCATTTGATTTTGTATGGTTTCTTTTTGTTTCTTTTCATTCCCCCTAAGTTGTTTTTCTCAATGATGAATGGTGTCTGTTTTTTTCCTCTCTGTTAGAATCCATATAAATGAATTAAATTTACCCAACCCATTAGCTTAAGCTTTTGGGTTGAGTGGTGGTTTGTTCATCCTTAAGATGGTATCAGAGCGGGAGGTCCTATGTTCGAACCCCTGCATTGTCGTTTCCTCCCCATTTATTATGATTTCCACTTGTTGGGTCTTGATGTTGTTTTCCAAGCCCACAAGTGAGGGGGAGTGTTAGAATCCATATAAATGAATTAAATTTACCCAACCCATTAGCTTAAGCTTTTGGGTTGAGTGGTGGTTTGTTCATCCTTAAGACTCTCATTTCTCCCAAGGAAAATTGTTTTCTTTTTTATAAAATATGTTGTGGTATTATTAATTATTTATTTCCATCAAGCCATCTCAAGAGTTACTTTTTTCGGAGGAGGGTTGGGAGGAGAGAAGAAAAAATATACGCAATCTATTGGCCATTTTGATTGGTTTGATTTAGTCCAGCAGTCTTTTACTACACTCATTTTGTGTTCTTCAGGGGTTTGTAGGTGCAAACTGGGTCTCAACAGATTCTCCAAAGCAAGAAATTATTTGGGATCATGGTTTTGAAGCCGTACCTGCTTCTTCGAGCTGTGTAAGTTGCCATCTTGAGTCCTTTACTATTCAGCTGTTGCATGGAAGGACCGAAATATCAATTATCTGCCTCTTCATTTAAAATTCATTTTTTTCCTTGCATTGCATCACATGGACTTCAGAGTGTTACTTACTCTGTAAGTTTGTCCAGCATGACCAATTATTTATTCAGCGAACTATTTGCATGCCTTATGAGGTTTGAGATAACACATTTTGTGTTCAAAATTTCAAATTATCGTAATTATTGTTCTCAAGTTCTTGGTTACAAAAAATCTAATTCGTTTCTGTGGATCAATTTGACCTGTAATGTTGAGCCTAAATGCATTAACTTTTTGATAAATGAGTTGTATCCGAGAAATTTTACCACTTTATTCATGAAATTGATAGGACTATTGAACTTGAATGGTGCTGTTTCAGGATCTTTCATATGCCTGAACGTATTCAGTATTTAATCAAAATAGATGCGGAGGAATTGGAACTTCCTCTGCAATGATATTTTTACTTAAAAAATATTGATATTTTCCTCAGAAACTATCTGCTTCTAGAGGAAAAATGGCTGAAGGTTACTCTGGAGCTAAGAGACCGCATCAACATGAGACTGTTGAATGTGTAAGTTTTTTTGATTGGGACGAACTTAGTAAGTTTGTCCAGCATGACCAATTATTTATTCAGCGAACTATTTGCATGCCTTATGAGGTTTGAGATAACACATTTTGTGTTCAAAATTTCAAATTATCGTAATTATTGTTCTCAAGTTCTTGGTTACAAAAAATCTAATTCATTTCTGTGGATCAATTTGACCTGTAATGTTGAGCCTAAATGCATTAACTTTTTGATAAATGAGTTGTATCCGAGAAATTTTACCACTTTATTCATGAATTTGATAGGACTATTGAACTTGAATGGTGCTGTTTCAGGATCTTTCATATGCCTGAACGTATTCAATATTTAATCAAAATAGATGCGGAGGAATTGGAACTTCCTCTGCAATGATATTTTTACTTAAAAAATATTGATATTTTCCTCAGAAACCATCTGCTTCTAGAGGAAAAATGGCTGAAGGTTACTCTGGAGCTAAGAGACCGCATCAACATGAGACTGTTGAATGTGTAAGTTTTTTTTATTGGGAAAAGAGGTACCTGTTTGCATTTCCCAGGGTACAAAATTTGTAGTTTTTACTTTTCGATCTGGTCAACCTTGTGGTTTGAGCATAGATTTCAAGCTTGATGCAAATAAATAAATTTTTGTTCTACGTCTCCGAGCTATATATCCATTTCTTTGTTTTTGATTATCTTTCAACTGTATTCGTTTTTATCTTCTTCAGGACTTTATAGGTGGCAGTTATTGGACCTCAACACCTCTACCAGATATTGGTTTTATAGCCTCAGCTCCTTCGTCTAACTGCGTAAGTTGCTATGTTTAGTCATTTACCATTTTGTAGTTTCCTGGAAGAAATAACAATATCAATATACGGATATCTGCTGTGTTCAATCTTCATTCTTTATGCAAATCTTCTAGTCTGTAAACCACTCATGGTATACATTTATGGATATTTACTTTCTTTCGTTATTTATGAAACTCTCTCTCTATCTCTCTCTCTCTCTCTTTGAGATGTTAGAATTTCTTTAAATTGAATCAACCAGAGATAGCTTGTCTCCTGTGTAATCCCCTATGTAGTTGTTACATAGGGAAGTGTCTGCCTTTAATTTGGTAATGAACTGCCAGTTCATAAATTTCGGGCAGAAAGTTGTCCAAGTTGAGTAGAGTTGATGCTTCCTCAAAATATCAAGGTAGGATAAACACACTGGACTTTATACGGTGGGTGCTATTTCCTAGAAGAGTAAGGTAGGTGATAAAAGCTCATCCTAAATGTGGTGTGATACTGTTTCCCGGGTGAGGGTGTAAGACTACCAATTGTAAATGTTTATACTAGTAGGGGCAGGGATGGAAATTCTACTATTAGTTAGTTACAGGTGGGGCCCAGTGGTGAGTGTGGAAGTCTGTACGGGGTAGTAGTATAAGGCAGGGAAAACCTGGGATGGAAGGTAGGGTTTATTTTCGTTGAGTGTCGTAGCTAGGCTATTGGGACAGATTACCAGCTCTCTCAAATTGGCTGGGTAGCATTGTTCTTCGTTTGTTTGTTGAATTCCAAGAACTTGTAAGGGAGAGATACCTTACAGATAGGGTCATTTGTCTTCTATCACAATAGTACTTCAACCAAATTCTTGGATGATCCACAACCCCACCCCTCGTACAGCTTGAGGAAATTCAAAGTTATGTATAGAATTCTCAAATAGATCCATAGATTATTAAATCAATTAGACTATGATTTAAATACTTTTTTCTTATTCTTTTGTTTATTTTTTATTCTTTTTTGAAAAAAAAACTCATTCTTATCCCCATAACTCAAGTTGTATAACTCTCCCGACGACCCTCTAGAAATTTCTCACCTTAACTAATCAAGGATGACATCAGTCTCTGAATACCGAGTCTTTTCTTTAGCTGGACATTCCAGTGATAATAATTATTGCTCCACTTCTACAAGTACAAAGTGTTAGTTGTTGTGGCATTTTGGAAGCGGAAAATGTTTTGAATGTTCTACACTTGTACCAAGGTTTGTAAGTGTGGAGCATTGGAGATGGTCGATACATGATGAAGCAGCTGGGTATGACTTAAATATTCAGTATAGACTATAGGCTATGGACTAAAGAGATTATGTGGAAGCACTTCATTCGAGCTTTTCTTTGGATGTTTTGGAATGAAAGGAACCATCGACTATTCCTAGACAAAGATCTTGCCTTTCATCACTCTTTTTGATAATATTACTTTTCATGCTGTCTTGGTGTAAATCATCCCTCTATTTTCATTCTTATAGGATGACTCTTTATTAACTAATTGGAGAAGTTTCCTATAACTCCTTTGGTTTTTTGGTGGGTTCGCCCCTCTCTTTGTAATTTCATCCATCAATGAAATTGTTTCTTATAAAAAAAAAAGTTCTATATTGTAACTTTTTCCTTTAACCTTAATAATATCCTGTGAATTGCTCTAAGTTTTATCTCAACTTGCAATGTGTTTAAAAATTTAAATAATAAATTAAACAGGTTAACTCCCAGACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGGAATCCTGGGCTAGCAGGTGCTGGAGCTGTTTTACGTGCTAAAGATGGATCTACAGTATGTAAATTCAGTTATTCTATGTACATTCTTAATTTAATTTAATTAAATATTTTTTTTTCTTTTGTTTAAGTCAGTTATATTTGATAGGTCTGTAGGTTGCAAGAAGGGGTTGGGATCGCTACAAATAATGTTGCGGAATATCGTGCTGTAATTTTAGGACTTAAACATGCTCTTAAGAATGGCTTTAAACACATTCGTGTCCAAGGAGATTCCAAGCTCGTTTGTATGCAGGTTTGCTGTGCACAACAATATGCATTCAAAATTATCATAAATTTGAGGTGTTCAAGTGACACAAATTAGTTGTGTATAAGAAAGATAGATAAAATATTTAAATTATTGTATATGTATATATATATATATGTAGATATTCAAATTTGACACCGAAGAAATTATCAATTTTTTTTTACATAGAAGGGGAAGAGATGTGCGTACTCCTATAGAATATTCTAAGTGAACATTTAGACTGAAAAAAATTGATGTAATATAAATTTTTAAGTGAAACATTAAGACTTGTATTCATAACTTCGGAAGCTTTCTTCGTACTATTATGCCAACTTAGGTGGTTTGACAGATTAGATATATCTCTTTACTAATAAATATTGGATCTCGCCTCCACTCACTAAAATACTCTAATGGGTTATCATCCAAGTGATAATTGGGACTCTACATAAGACCGATGGTGTGTCCTCTCCTTTCTATATTTGTGGAGGTGCTGGTCTTCAATAGATTTATGTGGAGAGGGGCAAATGAGAAGGATGGAAACTCTCAGACTCAAAGGAAGTAAATAAATATGTTATTTGATTTTGAAATATGTTAGTAATTATATTTAGTTGAATAGGAGTATCAATTGATCTATGTGGTATAGATGCTACTATTGGTTGGTTCATAAGATTGAATAATTTGCCACAGAAATTGGAACAAGGCAAGATTTATAGTTCTGAAAATGGCATTAAATTGTTTTGATTTACTATCTTTCATGTAGTTGAATACAGTGAAGTCATAATTTATGTTGTTTAGTCGATGTTATTGTTTATTCTCGAGAACTTGTTGTTTAACTATGTTCCCAACTGTTGCAACCGTTTGATATTACAATTGTAGGTCCTTCCAGAAAGAAAAAGGAAAAGAAGATTTAGATGTCGATAGGCTTTCAAGATGTTGCTACTTTCTTTAATAGAATATAGTGACAGATAGCTCAAAAATGCACAATAATAAGTAATACGTTAGAGATTGATGACTTATATCGACCTTTTTTCTCCGATTCTAACCTTTTTTATGTTTGAATTGGATGTACAATCAAACGCTGGTTTTGTATGACAGGTTCAGGGTCTGTGGAAGATCAAAAACCCAAATATGGGTCAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGCATCATTTGAGATCAGTCATATCCCTAGG

mRNA sequence

TTTGATCCCAATGCAACGATCTACAAAGGGTATCACTTATCTAAAGAAGCAGAGCAGTACCTTGCGTCACATGGACTTCAGAGTGCGACTTACTCTATAAGTGCTGCCAATGTGACAGAGGATTTATTTGGCAAACTACTTGCTTGCACTCATGAGAAACCATCTGCTTCTAGAGGAAAAATGGCTGAAGGTTACTCTGGAGCTAAGAGACCGCATCAACATGAGACTGTTGAATGTACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGGAATCCTGGGCTAGCAGGTGCTGGAGCTGTTTTACGTGCTAAAGATGGATCTACAGTCTGTAGGTTGCAAGAAGGGGTTGGGATCGCTACAAATAATGTTGCGGAATATCGTGCTGTAATTTTAGGACTTAAACATGCTCTTAAGAATGGCTTTAAACACATTCGTGTCCAAGGAGATTCCAAGCTCGTTTGTATGCAGGTTCAGGGTCTGTGGAAGATCAAAAACCCAAATATGGGTCAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGCATCATTTGAGATCAGTCATATCCCTAGG

Coding sequence (CDS)

TTTGATCCCAATGCAACGATCTACAAAGGGTATCACTTATCTAAAGAAGCAGAGCAGTACCTTGCGTCACATGGACTTCAGAGTGCGACTTACTCTATAAGTGCTGCCAATGTGACAGAGGATTTATTTGGCAAACTACTTGCTTGCACTCATGAGAAACCATCTGCTTCTAGAGGAAAAATGGCTGAAGGTTACTCTGGAGCTAAGAGACCGCATCAACATGAGACTGTTGAATGTACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGGAATCCTGGGCTAGCAGGTGCTGGAGCTGTTTTACGTGCTAAAGATGGATCTACAGTCTGTAGGTTGCAAGAAGGGGTTGGGATCGCTACAAATAATGTTGCGGAATATCGTGCTGTAATTTTAGGACTTAAACATGCTCTTAAGAATGGCTTTAAACACATTCGTGTCCAAGGAGATTCCAAGCTCGTTTGTATGCAGGTTCAGGGTCTGTGGAAGATCAAAAACCCAAATATGGGTCAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGCATCATTTGAGATCAGTCATATCCCTAGG

Protein sequence

FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEKPSASRGKMAEGYSGAKRPHQHETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR

Homology

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BLAST of MS016608 vs. NCBI nr
Match: XP_022150130.1 (uncharacterized protein LOC111018384 [Momordica charantia])

HSP 1 Score: 337.4 bits (864), Expect = 8.0e-89
Identity = 191/310 (61.61%), Postives = 193/310 (62.26%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEKP------ 60
           FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACT+E+P      
Sbjct: 35  FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTYEQPSSYRGQ 94

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 95  TTEERSANRPHQVHGANEYGFVGANWVSTDSPKQEIIWDHGFEAVPASSSCKLSASRGKM 154

Query: 121 --------------------SASRGKMAEGYSGAKRPHQHETVEC--------------- 180
                               SASRGKMAEGYSGAKRPHQHETVEC               
Sbjct: 155 AEGYSGAKRPHQHETVECKLSASRGKMAEGYSGAKRPHQHETVECDFIGGSYWTSTPLPD 214

Query: 181 ----------------TYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNN 194
                           TYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNN
Sbjct: 215 IGFIASAPSSNCVNSQTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNN 274

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BLAST of MS016608 vs. NCBI nr
Match: XP_004147444.1 (uncharacterized protein LOC101219107 [Cucumis sativus] >KGN59631.1 hypothetical protein Csa_002359 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 162/195 (83.08%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRG 60
           FDP+ATIYKGYHLSKEAE+YL +HGLQSATYSISAANVT+DLFGK+L C  +E+PSA+RG
Sbjct: 33  FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRG 92

Query: 61  KMAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVG 120
           KMAE YS A+R  +  E  E TYFLEFDGASKGNPGLAGAGAVLRA DGSTVC+LQEGVG
Sbjct: 93  KMAEEYSKAERQERVLENTEYTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVG 152

Query: 121 IATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKE 180
           IAT NVAEYRAVILGLKHALKNG KHIRVQGDSKLVCMQVQGLWK+KNPNM + CKVAKE
Sbjct: 153 IATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKE 212

Query: 181 LKDKFASFEISHIPR 194
           LKDKF SFEISH PR
Sbjct: 213 LKDKFVSFEISHFPR 227

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BLAST of MS016608 vs. NCBI nr
Match: XP_008443477.1 (PREDICTED: uncharacterized protein LOC103487060 isoform X1 [Cucumis melo])

HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83
Identity = 159/195 (81.54%), Postives = 173/195 (88.72%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRG 60
           FDPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT+DLFGK+L C  +E+PS +RG
Sbjct: 33  FDPNATIYKGYHLSKEAEEYLVSHGLQSATYSISAANVTKDLFGKILPCFPYEQPSTTRG 92

Query: 61  KMAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVG 120
           KMAE Y  A+R  +  +  E TYFLEFDGASKGNPGLAGAGA+LRA DGSTVCRLQEGVG
Sbjct: 93  KMAEEYPKAERQERVLKNTEYTYFLEFDGASKGNPGLAGAGAILRANDGSTVCRLQEGVG 152

Query: 121 IATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKE 180
           IAT NVAEYRA+ILGLKHALKNG KHI VQGDSKLVCMQVQGLWK+KN NM +LCKVAKE
Sbjct: 153 IATCNVAEYRAIILGLKHALKNGIKHIYVQGDSKLVCMQVQGLWKLKNQNMAELCKVAKE 212

Query: 181 LKDKFASFEISHIPR 194
           LKDKF SFEISH+PR
Sbjct: 213 LKDKFVSFEISHVPR 227

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BLAST of MS016608 vs. NCBI nr
Match: TYK17758.1 (RNase H domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 2   DPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRGK 61
           DPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT+DLFGK+L C  +E+PS +RGK
Sbjct: 51  DPNATIYKGYHLSKEAEEYLVSHGLQSATYSISAANVTKDLFGKILPCFPYEQPSTTRGK 110

Query: 62  MAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGI 121
           MAE Y  A+R  +  +  E TYFLEFDGASKGNPGLAGAGA+LRA DGSTVCRLQEGVGI
Sbjct: 111 MAEEYPKAERQERVLKNTEYTYFLEFDGASKGNPGLAGAGAILRANDGSTVCRLQEGVGI 170

Query: 122 ATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKEL 181
           AT NVAEYRA+ILGLKHALKNG KHI VQGDSKLVCMQVQGLWK+KN NM +LCKVAKEL
Sbjct: 171 ATCNVAEYRAIILGLKHALKNGIKHIYVQGDSKLVCMQVQGLWKLKNQNMAELCKVAKEL 230

Query: 182 KDKFASFEISHIPR 194
           KDKF SFEISH+PR
Sbjct: 231 KDKFVSFEISHVPR 244

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BLAST of MS016608 vs. NCBI nr
Match: XP_008443478.1 (PREDICTED: uncharacterized protein Mb2253c isoform X2 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 2   DPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRGK 61
           DPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT+DLFGK+L C  +E+PS +RGK
Sbjct: 2   DPNATIYKGYHLSKEAEEYLVSHGLQSATYSISAANVTKDLFGKILPCFPYEQPSTTRGK 61

Query: 62  MAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGI 121
           MAE Y  A+R  +  +  E TYFLEFDGASKGNPGLAGAGA+LRA DGSTVCRLQEGVGI
Sbjct: 62  MAEEYPKAERQERVLKNTEYTYFLEFDGASKGNPGLAGAGAILRANDGSTVCRLQEGVGI 121

Query: 122 ATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKEL 181
           AT NVAEYRA+ILGLKHALKNG KHI VQGDSKLVCMQVQGLWK+KN NM +LCKVAKEL
Sbjct: 122 ATCNVAEYRAIILGLKHALKNGIKHIYVQGDSKLVCMQVQGLWKLKNQNMAELCKVAKEL 181

Query: 182 KDKFASFEISHIPR 194
           KDKF SFEISH+PR
Sbjct: 182 KDKFVSFEISHVPR 195

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BLAST of MS016608 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-18
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 83  LEFDGASKGNPGLAGAGAVLRAKDGSTV-CRLQEGVGIATNNVAEYRAVILGLKHALKNG 142
           +E DG S+GNPG AG GAV+   D STV    ++ +G ATNNVAEYR +I GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 143 FKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
                V  DSKLV  Q+ G WK+K+P++ +L   A+ L  +F       +PR
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR 116

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BLAST of MS016608 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-18
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 83  LEFDGASKGNPGLAGAGAVLRAKDGSTV-CRLQEGVGIATNNVAEYRAVILGLKHALKNG 142
           +E DG S+GNPG AG GAV+   D STV    ++ +G ATNNVAEYR +I GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 143 FKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
                V  DSKLV  Q+ G WK+K+P++ +L   A+ L  +F       +PR
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR 116

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BLAST of MS016608 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-18
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 83  LEFDGASKGNPGLAGAGAVLRAKDGSTV-CRLQEGVGIATNNVAEYRAVILGLKHALKNG 142
           +E DG S+GNPG AG GAV+   D STV    ++ +G ATNNVAEYR +I GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 143 FKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
                V  DSKLV  Q+ G WK+K+P++ +L   A+ L  +F       +PR
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR 116

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BLAST of MS016608 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.5e-17
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 85  FDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNNVAEYRAVILGLKHALKNGFKH 144
           FDGAS+GNPG A  G VL + DG  V    + +G ATNN AEY A+I  L+ A   GF  
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFDD 133

Query: 145 IRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
           I ++GDS+LV  Q+ G W   +P++ +    A+EL   F  + I+H+PR
Sbjct: 134 IELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPR 182

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BLAST of MS016608 vs. ExPASy Swiss-Prot
Match: P54162 (14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308 GN=rnhA PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-05
Identity = 33/107 (30.84%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 86  DGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNNVAEYRAVILGLKHALKNGFKHI 145
           DGAS GNPG +G G  ++ +  +    +   +G+ TN  AE+ A+I G+K     G++ +
Sbjct: 8   DGASAGNPGPSGIGIFIKHEGKAESFSIP--IGVHTNQEAEFLALIEGMKLCATRGYQSV 67

Query: 146 RVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIP 193
             + DS +V  +   L  +KN       +    LK  F  F I  IP
Sbjct: 68  SFRTDSDIV-ERATELEMVKNITFQPFVEEIIRLKAAFPLFFIKWIP 111

[Close]

BLAST of MS016608 vs. ExPASy TrEMBL
Match: A0A6J1D7M4 (uncharacterized protein LOC111018384 OS=Momordica charantia OX=3673 GN=LOC111018384 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 191/310 (61.61%), Postives = 193/310 (62.26%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEKP------ 60
           FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACT+E+P      
Sbjct: 35  FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTYEQPSSYRGQ 94

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 95  TTEERSANRPHQVHGANEYGFVGANWVSTDSPKQEIIWDHGFEAVPASSSCKLSASRGKM 154

Query: 121 --------------------SASRGKMAEGYSGAKRPHQHETVEC--------------- 180
                               SASRGKMAEGYSGAKRPHQHETVEC               
Sbjct: 155 AEGYSGAKRPHQHETVECKLSASRGKMAEGYSGAKRPHQHETVECDFIGGSYWTSTPLPD 214

Query: 181 ----------------TYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNN 194
                           TYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNN
Sbjct: 215 IGFIASAPSSNCVNSQTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNN 274

[Close]

BLAST of MS016608 vs. ExPASy TrEMBL
Match: A0A0A0LHV8 (RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G829210 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.9e-85
Identity = 162/195 (83.08%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRG 60
           FDP+ATIYKGYHLSKEAE+YL +HGLQSATYSISAANVT+DLFGK+L C  +E+PSA+RG
Sbjct: 33  FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRG 92

Query: 61  KMAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVG 120
           KMAE YS A+R  +  E  E TYFLEFDGASKGNPGLAGAGAVLRA DGSTVC+LQEGVG
Sbjct: 93  KMAEEYSKAERQERVLENTEYTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVG 152

Query: 121 IATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKE 180
           IAT NVAEYRAVILGLKHALKNG KHIRVQGDSKLVCMQVQGLWK+KNPNM + CKVAKE
Sbjct: 153 IATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKE 212

Query: 181 LKDKFASFEISHIPR 194
           LKDKF SFEISH PR
Sbjct: 213 LKDKFVSFEISHFPR 227

[Close]

BLAST of MS016608 vs. ExPASy TrEMBL
Match: A0A1S3B7N6 (uncharacterized protein LOC103487060 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487060 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 159/195 (81.54%), Postives = 173/195 (88.72%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRG 60
           FDPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT+DLFGK+L C  +E+PS +RG
Sbjct: 33  FDPNATIYKGYHLSKEAEEYLVSHGLQSATYSISAANVTKDLFGKILPCFPYEQPSTTRG 92

Query: 61  KMAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVG 120
           KMAE Y  A+R  +  +  E TYFLEFDGASKGNPGLAGAGA+LRA DGSTVCRLQEGVG
Sbjct: 93  KMAEEYPKAERQERVLKNTEYTYFLEFDGASKGNPGLAGAGAILRANDGSTVCRLQEGVG 152

Query: 121 IATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKE 180
           IAT NVAEYRA+ILGLKHALKNG KHI VQGDSKLVCMQVQGLWK+KN NM +LCKVAKE
Sbjct: 153 IATCNVAEYRAIILGLKHALKNGIKHIYVQGDSKLVCMQVQGLWKLKNQNMAELCKVAKE 212

Query: 181 LKDKFASFEISHIPR 194
           LKDKF SFEISH+PR
Sbjct: 213 LKDKFVSFEISHVPR 227

[Close]

BLAST of MS016608 vs. ExPASy TrEMBL
Match: A0A5D3D2K9 (RNase H domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00310 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.2e-83
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 2   DPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRGK 61
           DPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT+DLFGK+L C  +E+PS +RGK
Sbjct: 51  DPNATIYKGYHLSKEAEEYLVSHGLQSATYSISAANVTKDLFGKILPCFPYEQPSTTRGK 110

Query: 62  MAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGI 121
           MAE Y  A+R  +  +  E TYFLEFDGASKGNPGLAGAGA+LRA DGSTVCRLQEGVGI
Sbjct: 111 MAEEYPKAERQERVLKNTEYTYFLEFDGASKGNPGLAGAGAILRANDGSTVCRLQEGVGI 170

Query: 122 ATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKEL 181
           AT NVAEYRA+ILGLKHALKNG KHI VQGDSKLVCMQVQGLWK+KN NM +LCKVAKEL
Sbjct: 171 ATCNVAEYRAIILGLKHALKNGIKHIYVQGDSKLVCMQVQGLWKLKNQNMAELCKVAKEL 230

Query: 182 KDKFASFEISHIPR 194
           KDKF SFEISH+PR
Sbjct: 231 KDKFVSFEISHVPR 244

[Close]

BLAST of MS016608 vs. ExPASy TrEMBL
Match: A0A1S3B845 (uncharacterized protein Mb2253c isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487060 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.2e-83
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 2   DPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLAC-THEKPSASRGK 61
           DPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT+DLFGK+L C  +E+PS +RGK
Sbjct: 2   DPNATIYKGYHLSKEAEEYLVSHGLQSATYSISAANVTKDLFGKILPCFPYEQPSTTRGK 61

Query: 62  MAEGYSGAKRPHQ-HETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGI 121
           MAE Y  A+R  +  +  E TYFLEFDGASKGNPGLAGAGA+LRA DGSTVCRLQEGVGI
Sbjct: 62  MAEEYPKAERQERVLKNTEYTYFLEFDGASKGNPGLAGAGAILRANDGSTVCRLQEGVGI 121

Query: 122 ATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKEL 181
           AT NVAEYRA+ILGLKHALKNG KHI VQGDSKLVCMQVQGLWK+KN NM +LCKVAKEL
Sbjct: 122 ATCNVAEYRAIILGLKHALKNGIKHIYVQGDSKLVCMQVQGLWKLKNQNMAELCKVAKEL 181

Query: 182 KDKFASFEISHIPR 194
           KDKF SFEISH+PR
Sbjct: 182 KDKFVSFEISHVPR 195

[Close]

BLAST of MS016608 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-49
Identity = 106/229 (46.29%), Postives = 139/229 (60.70%), Query Frame = 0


Query: 3   PNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEKPSASRGK-- 62
           P  ++YKGY   K AE  L+S G+++A +S++A++V +D FGKL+ C  ++PS+S+G+  
Sbjct: 41  PAMSVYKGYGWPKGAEDLLSSFGIKNALFSVNASHVKDDAFGKLIPCPVQQPSSSQGESL 100

Query: 63  -----------MAEGYSGAKRPHQ-------------------------HETVECTYFLE 122
                      M  G SG+  P                            +   CT  +E
Sbjct: 101 NKSSPSKRLQDMGSGESGSFSPSPPQKQLKIENDMLRRIPSSLLTRTPIRQNDSCT--IE 160

Query: 123 FDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNNVAEYRAVILGLKHALKNGFKH 182
           FDGASKGNPG AGAGAVLRA D S +  L+EGVG ATNNVAEYRA++LGL+ AL  GFK+
Sbjct: 161 FDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKN 220

Query: 183 IRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
           + V GDS LVCMQVQG WK  +P M +LCK AKEL + F +F+I HI R
Sbjct: 221 VHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAR 267

[Close]

BLAST of MS016608 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-49
Identity = 106/229 (46.29%), Postives = 139/229 (60.70%), Query Frame = 0


Query: 3   PNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEKPSASRGK-- 62
           P  ++YKGY   K AE  L+S G+++A +S++A++V +D FGKL+ C  ++PS+S+G+  
Sbjct: 41  PAMSVYKGYGWPKGAEDLLSSFGIKNALFSVNASHVKDDAFGKLIPCPVQQPSSSQGESL 100

Query: 63  -----------MAEGYSGAKRPHQ-------------------------HETVECTYFLE 122
                      M  G SG+  P                            +   CT  +E
Sbjct: 101 NKSSPSKRLQDMGSGESGSFSPSPPQKQLKIENDMLRRIPSSLLTRTPIRQNDSCT--IE 160

Query: 123 FDGASKGNPGLAGAGAVLRAKDGSTVCRLQEGVGIATNNVAEYRAVILGLKHALKNGFKH 182
           FDGASKGNPG AGAGAVLRA D S +  L+EGVG ATNNVAEYRA++LGL+ AL  GFK+
Sbjct: 161 FDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKN 220

Query: 183 IRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
           + V GDS LVCMQVQG WK  +P M +LCK AKEL + F +F+I HI R
Sbjct: 221 VHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAR 267

[Close]

BLAST of MS016608 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 188.7 bits (478), Expect = 4.3e-48
Identity = 95/219 (43.38%), Postives = 143/219 (65.30%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEKPSASRGK 60
           FD   ++YKGY L K+ E+YL+S GL+   YS+ A+++ +D+FG L  C  ++P+    K
Sbjct: 111 FDLPVSVYKGYSLPKDTEEYLSSVGLKKPLYSLRASDLKDDMFGALTPCLFQEPAPCTVK 170

Query: 61  MAEGYSGAKRPHQHETVEC--------------------------TYFLEFDGASKGNPG 120
           ++E  + ++   + +  +                           T F+EFDGASKGNPG
Sbjct: 171 VSEDETTSETKSKDDKKDQLPSASISYDPLEKLSKVEPSAYISDETCFIEFDGASKGNPG 230

Query: 121 LAGAGAVLRAKDGSTVCRLQEGVGIATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLV 180
           L+GA AVL+ +DGS +CR+++G+GIATNN AEY A+ILGLK+A++ G+K+I+V+GDSKLV
Sbjct: 231 LSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLV 290

Query: 181 CMQVQGLWKIKNPNMGQLCKVAKELKDKFASFEISHIPR 194
           CMQ++G WK+ +  + +L K AK L +K  SFEISH+ R
Sbjct: 291 CMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLR 329

[Close]

BLAST of MS016608 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 94/197 (47.72%), Postives = 133/197 (67.51%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEK--PSASR 60
           +DP  ++YKGY L K+ E+ L++ GL+   Y   A ++ ED+FG L  C  +   PSAS 
Sbjct: 108 YDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLKEDMFGALTPCLFQDQLPSASM 167

Query: 61  G--KMAEGYSGAKRPHQHETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEG 120
              K+AE    A   ++      T  +EFDGASKGNPGL+GA AVL+ +DGS + ++++G
Sbjct: 168 SVEKLAELEPSADTSYE------TCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQG 227

Query: 121 VGIATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVA 180
           +GIATNN AEY  +ILGLKHA++ G+  I+V+ DSKLVCMQ++G WK+ +  + +L K A
Sbjct: 228 LGIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEA 287

Query: 181 KELKDKFASFEISHIPR 194
           K+L DK  SFEISH+ R
Sbjct: 288 KQLSDKCLSFEISHVLR 298

[Close]

BLAST of MS016608 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 94/197 (47.72%), Postives = 133/197 (67.51%), Query Frame = 0


Query: 1   FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTEDLFGKLLACTHEK--PSASR 60
           +DP  ++YKGY L K+ E+ L++ GL+   Y   A ++ ED+FG L  C  +   PSAS 
Sbjct: 108 YDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLKEDMFGALTPCLFQDQLPSASM 167

Query: 61  G--KMAEGYSGAKRPHQHETVECTYFLEFDGASKGNPGLAGAGAVLRAKDGSTVCRLQEG 120
              K+AE    A   ++      T  +EFDGASKGNPGL+GA AVL+ +DGS + ++++G
Sbjct: 168 SVEKLAELEPSADTSYE------TCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQG 227

Query: 121 VGIATNNVAEYRAVILGLKHALKNGFKHIRVQGDSKLVCMQVQGLWKIKNPNMGQLCKVA 180
           +GIATNN AEY  +ILGLKHA++ G+  I+V+ DSKLVCMQ++G WK+ +  + +L K A
Sbjct: 228 LGIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEA 287

Query: 181 KELKDKFASFEISHIPR 194
           K+L DK  SFEISH+ R
Sbjct: 288 KQLSDKCLSFEISHVLR 298

The following BLAST results are available for this feature:

BLAST of MS016608 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150130.1	8.0e-89	61.61	uncharacterized protein LOC111018384 [Momordica charantia]	[more]
XP_004147444.1	2.0e-84	83.08	uncharacterized protein LOC101219107 [Cucumis sativus] >KGN59631.1 hypothetical ...	[more]
XP_008443477.1	3.8e-83	81.54	PREDICTED: uncharacterized protein LOC103487060 isoform X1 [Cucumis melo]	[more]
TYK17758.1	1.9e-82	81.44	RNase H domain-containing family protein [Cucumis melo var. makuwa]	[more]
XP_008443478.1	1.9e-82	81.44	PREDICTED: uncharacterized protein Mb2253c isoform X2 [Cucumis melo]	[more]

BLAST of MS016608 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P9WLH5	5.9e-18	45.54	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	5.9e-18	45.54	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	5.9e-18	45.54	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
Q9HSF6	6.5e-17	44.04	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
P54162	9.7e-05	30.84	14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308...	[more]

BLAST of MS016608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7M4	3.9e-89	61.61	uncharacterized protein LOC111018384 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A0A0LHV8	9.9e-85	83.08	RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G829210 PE=...	[more]
A0A1S3B7N6	1.9e-83	81.54	uncharacterized protein LOC103487060 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D2K9	9.2e-83	81.44	RNase H domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B845	9.2e-83	81.44	uncharacterized protein Mb2253c isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034870...	[more]

BLAST of MS016608 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	3.9e-49	46.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	3.9e-49	46.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	4.3e-48	43.38	RNase H family protein	[more]
AT5G51080.1	1.2e-45	47.72	RNase H family protein	[more]
AT5G51080.2	1.2e-45	47.72	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 85..193 e-value: 2.6E-25 score: 88.6
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 77..193 score: 12.93542
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 81..193 e-value: 1.7E-31 score: 111.0
None	No IPR available	PANTHER	PTHR46387	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 58..193
None	No IPR available	PANTHER	PTHR46387:SF14	PUTATIVE-RELATED	coord: 58..193
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 81..193 e-value: 1.98563E-44 score: 141.841
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 81..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016608.1	MS016608.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity