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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CGATTGAATGAAATACGGGGGATGGGAAAAACGAACAAAAAAGAGCAAAAATGGATTCCGAAGATTTTGAGCGAAGAACTCGGCGTGAGAGATTTGGAGAGAGATTTGGGAAACGAAACAGGCGAATGAGAGCGAATACGTGGGCTGCGGGCCAATTTTTTTGCAGAGAGTCGAGGGAGTGGTTGAAAAGGACAATACCCAACCCAACGACGTCGTTTTTTTCTTTATCTTCTGGGTCAATGGGAATCATGTC mRNA sequence CGATTGAATGAAATACGGGGGATGGGAAAAACGAACAAAAAAGAGCAAAAATGGATTCCGAAGATTTTGAGCGAAGAACTCGGCGTGAGAGATTTGGAGAGAGATTTGGGAACGAAACAGGCGAATGAGAGCGAATACGTGGGCTGCGGGCCAATTTTTTTGCAGAGAGTCGAGGGAGTGGTTGAAAAGGACAATACCCAACCCAACGACGTCGTTTTTTTCTTTATCTTCTGGGTCAATGGGAATCATGTC Coding sequence (CDS) CGATTGAATGAAATACGGGGGATGGGAAAAACGAACAAAAAAGAGCAAAAATGGATTCCGAAGATTTTGAGCGAAGAACTCGGCGTGAGAGATTTGGAGAGAGATTTGGGAACGAAACAGGCGAATGAGAGCGAATACGTGGGCTGCGGGCCAATTTTTTTGCAGAGAGTCGAGGGAGTGGTTGAAAAGGACAATACCCAACCCAACGACGTCGTTTTTTTCTTTATCTTCTGGGTCAATGGGAATCATGTC Protein sequence RLNEIRGMGKTNKKEQKWIPKILSEELGVRDLERDLGTKQANESEYVGCGPIFLQRVEGVVEKDNTQPNDVVFFFIFWVNGNHV
Homology
BLAST of MS016607 vs. NCBI nr
Match: KGN59779.2 (hypothetical protein Csa_002210, partial [Cucumis sativus]) HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18 Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0
Query: 9 GKTNKKEQKWIPKILSEELGVRDLERDLG---TKQANESEYVGCGPIFLQRVEGVVEKDN 68
GK +KK +KW+PKILSEEL VRDLER++G TK ANESEYVG GP FLQRVEGVVEKDN
Sbjct: 9 GKRSKK-KKWVPKILSEELAVRDLEREMGFEKTKMANESEYVGLGPNFLQRVEGVVEKDN 68
Query: 69 TQPNDV 72
T PNDV
Sbjct: 69 TNPNDV 73
BLAST of MS016607 vs. ExPASy TrEMBL
Match: A0A0A0LG43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829220 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 9.1e-19 Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0
Query: 9 GKTNKKEQKWIPKILSEELGVRDLERDLG---TKQANESEYVGCGPIFLQRVEGVVEKDN 68
GK +KK +KW+PKILSEEL VRDLER++G TK ANESEYVG GP FLQRVEGVVEKDN
Sbjct: 9 GKRSKK-KKWVPKILSEELAVRDLEREMGFEKTKMANESEYVGLGPNFLQRVEGVVEKDN 68
Query: 69 TQPNDVV 73
T PNDVV
Sbjct: 69 TNPNDVV 74
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN59779.2 | 5.5e-18 | 77.27 | hypothetical protein Csa_002210, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LG43 | 9.1e-19 | 77.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829220 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS016607.1 | MS016607.1 | mRNA |
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