MS016529 (gene) Bitter gourd (TR) v1

Overview


Name	MS016529
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LOB domain-containing protein
Location	scaffold657: 564199 .. 564690 (-)
RNA-Seq Expression	MS016529
Synteny	MS016529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCCACCTACTCCAATTCTCCCTGCGCAGCCTGCAAGTTCCTCCGGCGAAAATGCCTACCGGACTGCGTTTTTGCCCCGTACTTCCCGCCCGAGGAGCCGCAGAAGTTCGCCAACGTCCACAAGATCTTCGGCGCCAGCAATGTCAGCAAGCTGCTGAACGAAGTCCAGCCACACCAACGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTAGGCGCCATCTCCATCCTCCAGAGGCAAGTCATCAAGCTCCAGAAAGAACTCGACGCCACCAATGCGAATCTCATCCGCTATGCCTGCAATGAAATCCCTGCTCCGTCCCCGTCCCCGTCGTCGTCCTCACAATACGCTCGGAGGTCGTCGTCTACGAACCATGAGGGAAGCTCCTCCACCTCTAGCTATGGCCACTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAAC

mRNA sequence

ATGGCTTCTTCCACCTACTCCAATTCTCCCTGCGCAGCCTGCAAGTTCCTCCGGCGAAAATGCCTACCGGACTGCGTTTTTGCCCCGTACTTCCCGCCCGAGGAGCCGCAGAAGTTCGCCAACGTCCACAAGATCTTCGGCGCCAGCAATGTCAGCAAGCTGCTGAACGAAGTCCAGCCACACCAACGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTAGGCGCCATCTCCATCCTCCAGAGGCAAGTCATCAAGCTCCAGAAAGAACTCGACGCCACCAATGCGAATCTCATCCGCTATGCCTGCAATGAAATCCCTGCTCCGTCCCCGTCCCCGTCGTCGTCCTCACAATACGCTCGGAGGTCGTCGTCTACGAACCATGAGGGAAGCTCCTCCACCTCTAGCTATGGCCACTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAAC

Coding sequence (CDS)

ATGGCTTCTTCCACCTACTCCAATTCTCCCTGCGCAGCCTGCAAGTTCCTCCGGCGAAAATGCCTACCGGACTGCGTTTTTGCCCCGTACTTCCCGCCCGAGGAGCCGCAGAAGTTCGCCAACGTCCACAAGATCTTCGGCGCCAGCAATGTCAGCAAGCTGCTGAACGAAGTCCAGCCACACCAACGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTAGGCGCCATCTCCATCCTCCAGAGGCAAGTCATCAAGCTCCAGAAAGAACTCGACGCCACCAATGCGAATCTCATCCGCTATGCCTGCAATGAAATCCCTGCTCCGTCCCCGTCCCCGTCGTCGTCCTCACAATACGCTCGGAGGTCGTCGTCTACGAACCATGAGGGAAGCTCCTCCACCTCTAGCTATGGCCACTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAAC

Protein sequence

MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPAPSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN

Homology

[Close]

BLAST of MS016529 vs. NCBI nr
Match: XP_022152200.1 (LOB domain-containing protein 25-like [Momordica charantia])

HSP 1 Score: 328.9 bits (842), Expect = 2.4e-86
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 15  MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA
Sbjct: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 134

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
           PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN
Sbjct: 135 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 178

[Close]

BLAST of MS016529 vs. NCBI nr
Match: XP_011652293.1 (LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypothetical protein Csa_001141 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 157/164 (95.73%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 120

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWSNN
Sbjct: 121 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNN 162

[Close]

BLAST of MS016529 vs. NCBI nr
Match: XP_004141196.1 (LOB domain-containing protein 25 isoform X1 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 157/164 (95.73%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 138

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWSNN
Sbjct: 139 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNN 180

[Close]

BLAST of MS016529 vs. NCBI nr
Match: XP_008443563.1 (PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa] >TYK00802.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa])

HSP 1 Score: 310.8 bits (795), Expect = 6.8e-81
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWSNN
Sbjct: 121 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNN 162

[Close]

BLAST of MS016529 vs. NCBI nr
Match: XP_038905774.1 (LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 156/164 (95.12%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 16  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 75

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIPA
Sbjct: 76  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 135

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYAR+SSST+HE SSSTSSYGHYYSGLYFSPWSNN
Sbjct: 136 --PSPSSSSQYARKSSSTSHEASSSTSSYGHYYSGLYFSPWSNN 177

[Close]

BLAST of MS016529 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-51
Identity = 93/111 (83.78%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of MS016529 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.5e-50
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MASSTYS-NSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 60
           MASS+ S NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 120
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 121 APSP 124
           A +P
Sbjct: 121 AGAP 124

[Close]

BLAST of MS016529 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-40
Identity = 89/158 (56.33%), Postives = 113/158 (71.52%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MASS+ +NSPCAACKFLRRKC P+CVFAPYFPP++PQKFANVHK+FGASNV+KLLNE+ P
Sbjct: 1   MASSS-TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
            QREDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    + L +Y    I A
Sbjct: 61  SQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILA 120

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYF 159
            +      +  A  +  T      +T+   HY+   +F
Sbjct: 121 ATHQSLGINLLAGAADGT------ATAVRDHYHHHQFF 151

[Close]

BLAST of MS016529 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-39
Identity = 80/145 (55.17%), Postives = 102/145 (70.34%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPAPSPSPS 126
           VNSLAYEA+ R++DPVYGCVG ISILQ  + +LQ++L      L +Y      + S +P+
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 127 SSSQYARRSSSTNHEGSSSTSSYGH 152
                A    +    G+ +  + GH
Sbjct: 150 GPQAMAEFIGNAMPNGAHNFINIGH 174

[Close]

BLAST of MS016529 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-38
Identity = 77/138 (55.80%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF  VH++FGASNV+KL+NE+ P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPAPSPSPS 126
           +NSLAYEA+ R++DPVYGCVG ISILQ  + +LQ++L      L +Y      + S +P+
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 127 SSSQYARRSSSTNHEGSS 145
                A    S    G++
Sbjct: 150 GPQAMAEFIGSAMPNGAA 167

[Close]

BLAST of MS016529 vs. ExPASy TrEMBL
Match: A0A6J1DD95 (LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC111019975 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 15  MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA
Sbjct: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 134

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
           PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN
Sbjct: 135 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 178

[Close]

BLAST of MS016529 vs. ExPASy TrEMBL
Match: A0A0A0LI15 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 157/164 (95.73%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 30  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 89

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIPA
Sbjct: 90  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 149

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWSNN
Sbjct: 150 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNN 191

[Close]

BLAST of MS016529 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWSNN
Sbjct: 121 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNN 162

[Close]

BLAST of MS016529 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWSNN
Sbjct: 121 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNN 162

[Close]

BLAST of MS016529 vs. ExPASy TrEMBL
Match: A0A6J1FAW3 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442374 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 120
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYAC EIPA
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 121 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNN 165
             PSPSSSSQYARRSSST+H+GSSSTSSYGHYYS  YFSPWSN+
Sbjct: 121 --PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNS 162

[Close]

BLAST of MS016529 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-52
Identity = 93/111 (83.78%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of MS016529 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 198.4 bits (503), Expect = 4.6e-51
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MASSTYS-NSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 60
           MASS+ S NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 120
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 121 APSP 124
           A +P
Sbjct: 121 AGAP 124

[Close]

BLAST of MS016529 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 198.4 bits (503), Expect = 4.6e-51
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MASSTYS-NSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 60
           MASS+ S NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 120
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 121 APSP 124
           A +P
Sbjct: 121 AGAP 124

[Close]

BLAST of MS016529 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 198.4 bits (503), Expect = 4.6e-51
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MASSTYS-NSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 60
           MASS+ S NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 120
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 121 APSP 124
           A +P
Sbjct: 121 AGAP 124

[Close]

BLAST of MS016529 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 198.4 bits (503), Expect = 4.6e-51
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MASSTYS-NSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 60
           MASS+ S NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 120
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 121 APSP 124
           A +P
Sbjct: 121 AGAP 124

The following BLAST results are available for this feature:

BLAST of MS016529 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152200.1	2.4e-86	100.00	LOB domain-containing protein 25-like [Momordica charantia]	[more]
XP_011652293.1	3.1e-81	95.73	LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypo...	[more]
XP_004141196.1	3.1e-81	95.73	LOB domain-containing protein 25 isoform X1 [Cucumis sativus]	[more]
XP_008443563.1	6.8e-81	95.12	PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LO...	[more]
XP_038905774.1	1.5e-80	95.12	LOB domain-containing protein 25-like [Benincasa hispida]	[more]

BLAST of MS016529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	4.5e-51	83.78	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	6.5e-50	78.23	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	1.6e-40	56.33	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	6.7e-39	55.17	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A1YKY7	4.3e-38	55.80	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]

BLAST of MS016529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD95	1.2e-86	100.00	LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A0A0LI15	1.5e-81	95.73	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV...	[more]
A0A5D3BPW0	3.3e-81	95.12	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B938	3.3e-81	95.12	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]
A0A6J1FAW3	1.4e-79	93.90	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]

BLAST of MS016529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	3.2e-52	83.78	LOB domain-containing protein 25	[more]
AT5G63090.2	4.6e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	4.6e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	4.6e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	4.6e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..147
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..162
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..162
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 1.9E-42 score: 143.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.569071

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016529.1	MS016529.1	mRNA