MS016520 (gene) Bitter gourd (TR) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTATTGCATTTATTTTTCTTGTTGCTCGTCATATATATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATTTTTTAGAAGCACATATTTTGTCGGAGGACCATTGGAGCGCTATTGCATTTATTTTTCTTGTTGCTCGTCATATATATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATTTTTTAGAAGCACATATTTTGTCGGAGGACCATTGGAGC GCTATTGCATTTATTTTTCTTGTTGCTCGTCATATATATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATTTTTTAGAAGCACATATTTTGTCGGAGGACCATTGGAGC AIAFIFLVARHIYRTNFGIGHSIKDFLEAHILSEDHWS Homology
BLAST of MS016520 vs. NCBI nr
Match: YP_009945416.1 (photosystem I P700 apoprotein A2 [Sechium edule] >QOE55946.1 photosystem I P700 apoprotein A2 [Sechium edule]) HSP 1 Score: 59.7 bits (143), Expect = 6.3e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. NCBI nr
Match: CBB12368.1 (Photosystem I P700 chlorophyll A apoprotein, partial [Vanilla cf. phalaenopsis AB-2009]) HSP 1 Score: 59.7 bits (143), Expect = 6.3e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. NCBI nr
Match: YP_009769837.1 (photosystem I P700 apoprotein A2 [Labichea lanceolata] >QIT00539.1 photosystem I P700 apoprotein A2 [Labichea lanceolata]) HSP 1 Score: 59.7 bits (143), Expect = 6.3e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. NCBI nr
Match: YP_009263860.1 (photosystem I P700 chlorophyll a [Dactyladenia bellayana] >YP_009263943.1 photosystem I P700 chlorophyll a [Dactyladenia buchneri] >YP_009264026.1 photosystem I P700 chlorophyll a [Dactyladenia floretii] >YP_009264524.1 photosystem I P700 chlorophyll a [Hirtella zanzibarica] >ANJ18074.1 photosystem I P700 chlorophyll a [Dactyladenia bellayana] >ANJ18157.1 photosystem I P700 chlorophyll a [Dactyladenia buchneri] >ANJ18240.1 photosystem I P700 chlorophyll a [Dactyladenia floretii] >ANJ18821.1 photosystem I P700 chlorophyll a [Hirtella zanzibarica]) HSP 1 Score: 59.7 bits (143), Expect = 6.3e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. NCBI nr
Match: YP_009743589.1 (photosystem I P700 chlorophyll a apoprotein A2 [Amorphophallus konjac] >YP_010129931.1 photosystem I P700 chlorophyll a apoprotein A2 [Amorphophallus titanum] >QIE11376.1 photosystem I P700 chlorophyll a apoprotein A2 [Amorphophallus konjac] >QKJ80267.1 photosystem I P700 chlorophyll a apoprotein A2 [Amorphophallus titanum]) HSP 1 Score: 59.7 bits (143), Expect = 6.3e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy Swiss-Prot
Match: Q09MH9 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Citrus sinensis OX=2711 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.3e-09 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy Swiss-Prot
Match: Q4VZN4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.3e-09 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy Swiss-Prot
Match: Q6EW49 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Nymphaea alba OX=34301 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.3e-09 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy Swiss-Prot
Match: A6MMK6 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Dioscorea elephantipes OX=145284 GN=psaB PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-08 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy Swiss-Prot
Match: Q06FW4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Pelargonium hortorum OX=4031 GN=psaB PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-08 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy TrEMBL
Match: A0A3B6CD48 (Photosystem I OS=Triticum aestivum OX=4565 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.4e-06 Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0
BLAST of MS016520 vs. ExPASy TrEMBL
Match: A0A1P8J737 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Juglans mandshurica OX=91218 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy TrEMBL
Match: A0A346Q3G8 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Paederia scandens OX=284589 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy TrEMBL
Match: A0A218KG43 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. ExPASy TrEMBL
Match: A0A1X9QHA3 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Acer palmatum OX=66201 GN=psaB PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS016520 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-09 Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0
BLAST of MS016520 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 51.2 bits (121), Expect = 2.1e-07 Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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