
MS016518 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGTACGAAGCTACTGTTGATGCAACGACCCTCGGTTACTGGTTACGCTGGAGGGTACTGTTCTGTGCAATATGTGTATTTGCTTCTTTTTCTGTAGCATTGTGGATGATATGGAAATATGAAATTAAAGATCGACTAGAACACAGAAGACGAGAAACTCAGCAAGATAAAAACCAACTTCGGAGTTGTGAAGCTTGGAGACCATGCGTCAGACAGATTCATCCAATTTGGTTGCTGGCTTTTCGATTTTGTGCTTTCTGTTTGCTGTTGGCTTCACTAATTGTGAAGGGCCTTTTGAACGGGGCTTCCATGTTTTATTATTACACCCAGTAAGCATTCTCTTATTATTATGATTATTATTTGGCTATCTCAAGGCAGGGTAAATCAACTCTAATTGTGTTTCATCTCTGGCTTAGGTGTTCAAGCCCCTAATTTCTTGCAGTTAATTGTCCCTTGGGACAGTAAGACATCTTGATTAGTCTCATTTGGTCTTAGTTTTAGTTAAAATAAGGAATTTAAATTGTTGATTAGACACCAAGGATGGAGAAAATTCTGAGTGCTTAGAATATTTACAGGGAACCTTTATCAACCTCCATAATTTCAGGAGGTTGAAAGTTTAAGACAATGGTTTTCAAGAGTAGATATTTAGATCCGAGCTCCCAAGTGGCAGCCCAGTTGGCAAGGACTTGGGATTTCTTGGTCATATTGGCTTAGAGTTCTCAAGTTCGCACCTTCTGGTGAGCTTAATACAAAAAACCATTGATGTCTCTCACGTCCGGGCCTTGAGGCGGGTGGGGGTGCTCCTTGGTATAAATCCATGTATTATCAATCTGTGTTCTTAACGATGATATAGATTGCAATTTGCCAACAACTTTTCAAGTGTTATGAACCTTTTCCCATAATAATCTTCTAATTTTGGTTTTGTTGTATGCATTGTGTTGGGCTAGATGGACATTTACTCTACTTGCAGTATATTTTGCGGTATGTTATCCTCTTTTTTCTTATTCTCGGTACTGAGAATAGCACACCCACTTTAATGTATTTTAGTTTCTTCAAATGTTTTAGTAACACATGATCTAAATTTCCTTTTTCAGTGCGGGTCAGTGGTTTCCATGTATGGAGTTCTTATCTGCAACAAAACAAGAAGTGACGGTTTAAATGCTCGTCTTAATGAGAATAGTATGGAGGAAGGGCAACATGTTCCTCTTCTTTGTGGGAAGCCCTCAAATATAATTGGGGGTAATGTAGTTTCATATTCCAAGGAGCAAAGTATTTCCTCGAAGGCTGCCGACATCTGGAGTTACATTTTTGAAGTTCTATTCCAGGTCAATTTTCAGTTTAACTTCTAAAAGATAAATTCTCCAATTCGTTTGAATCAACTTTGTTGACTGTTTTTTGTTTTATACAAACAGATAAATGCAGGGGCAGTTGTTCTCACTGATTGCACTTATTGGTTCGTCATATTTCCATTTCTTACGATCAAAGATTACAATTTTACCTTTGTAAGTATCGTGGTTTCAAGTGCTACGTCTGGTCTTTATTTTGTCGTTTGCTTGGATGCAGGTGAACCTAAAATGCAGAACTATGAAAAATTGTCGAAATTTTCTGTTTTAATGGGGCTTTTTTCCCAAATGATAGATCAGATATAGTTATAATTAGTATTGTTATAATCATTTGAGACCGTTTGTTGAATTTTTGTTCTTCATATATGACCATTTCTATTCTCCGTTGCTTAAGGTTTGCTCCATCTCAATCAGTTATCTCCATAATGTCAGATGACGATTAATATGCACACGCTGAATTTGGTTCTACTTCTCGGTGAAACTGCTCTTAATAGCTTGGTAATGTTCCCTCTTATATGCTACATTCTGTTTTCTTCCTCGTACCCTTTCTTTTAACAAGCTGTTTGATGTCGATGCTCAGCAGTTGCTTCCAATGCCCCGGATTTCATATTTCTTTTTATGGACGGGTGTTTATGTCATTTTCCAGTGGATCATCCATGCATTTGTTTCGATTGGGTAACTTACAATTTACCTTTGTCCTACTTTCCAACTCTTACCTATTTAAATTCACCAAGTGAATAGCAAGCATTGGCTTTCTGCAGGTGGCCATATCCATTTCTTGATCTGTCAGCTCCTTATTCTCCATTATGGTACGCACTCAGATTTTTATTTCAGTCGTCGAACATTATTTGACATGATCTTTCGTATAAATTTAGTCTAGAAATTATATTCCAATTAACAGACATGTGACTATTAATTTTTACAAATGCATATGCATTCATATTGCATAAATTCATAAAAAATGCCATCCTTTCCTTATAAGTTCTCTGTCTCTTTTTTGTTATAGGTTTAATTCCTATTTTGGTCAATAAAGTTTCACATATTTTTTTTTATTTTAGTCCCTAGTTAGTTCCTAAATTTTGTAAAAAAAGCGATTCTTGCATACTATATGTAGCTTAAAATACTTGTCCATGTATAGATTTGCTAATCAAATAAATGAACCTAAAATGTGTTTATATTCAAGGGCACGGTGAAGAAGGAAGGAGGGGGGAGCAATTGTCCTCCTAGTTTTTCATGATTCAAAAAGTGCATAAAAATATTTAAAGCATGGGTGTTTTCCACTAATTTGCTCCTCCTAAATTTTTAGAATTGAAAGATTATATGTATATAAAGTTGGACTGAAATTTTTTCTGCCTCTGCCCCATAACCAGGTTTGTATCAAATAATTTATAGAATATTAATCTCAAGCCACAATGGGATATGAAATGTTAAGGGTGAGTTTAGTTGGGGATTTGAAAACAAGTTGTATTATTTGTTTTCAATGTTTTCGGATATGTGTTAGGTAACAAAGATTTGACAATGGAATCTCAATTTAAAAAATTGTTCAATGTGTGTTTAGTAATATATTTGTAAACCAATGATAGTTACTCACTAAATATTTAGTTTAATCTAAAATAATATTAATTAGTATATTAACCTTTTTGTTATAAATTTGGTAGAATTGTTATTTTAGAATATTATATGATTTATAATATATTATAGGGAAAAATAATATATTAACATTTTTGTTATAAACTAATGATGGAACGAGGGAGAGGTCCCTCCCTCGTTCGTTCCCTCTTCGTTGTCGGTGGAGGTCGTCGAAGGAGATTGACGGTAGCAGCGTTGATGGCCGGCGAGGATGGAGACAGTGGCCGGTGGTGAGTTTCATAGGGAGAGGGGAGGAAGGCGATGAAAGATGGAGATAATTTGAATAAAAAAGTCCAATCATACAAAATAAATTTATAAATTATTATATTTTACCAAATCAGCAAAATAAGTTACATCTTACTGTTAGTCAATTGAGGTCAGGGACCATTTAGAACTATTTTTCAAACTTCAGAGACTAAATAGGCACTACCCTCAAACCTTAGGGATCAAAAGTGTATTTTTCCCTATATTATATTTTACATTAATTTCAATGAAGAAAATGAAATGAAATGAGTATATAACATGAAAAAATATATTTATCAAAATATTTTTCCTTTTTGAATGTAATAATTTTGCATTTTAAAGTTAATCTGGAAATACTGTAAAATTAAAAAAAATTACTAAGTTATGTCATTTTTCATTCTCCCTTTCAACAATTTACTAGCAAGTTGCTCTTTGAGCCTTGCTTCAAAAAATAGGCCTGTTTTTGACTTCCATGCATCGAGGATTGATTCCGAACCTTTTTCTTCTTTGATGAATCTCAGGTATCTACTGATGGGGTTGATGCATATTCCGAGCTACGGTATGTCCATGTTGATTTTAGAACTGAAACATAATCTGATATCAAAGTGGTTCCCTCAGACATACCAATGC ATGCTGTACGAAGCTACTGTTGATGCAACGACCCTCGGTTACTGGTTACGCTGGAGGGTACTGTTCTGTGCAATATGTGTATTTGCTTCTTTTTCTGTAGCATTGTGGATGATATGGAAATATGAAATTAAAGATCGACTAGAACACAGAAGACGAGAAACTCAGCAAGATAAAAACCAACTTCGGAGTTGTGAAGCTTGGAGACCATGCGTCAGACAGATTCATCCAATTTGGTTGCTGGCTTTTCGATTTTGTGCTTTCTGTTTGCTGTTGGCTTCACTAATTGTGAAGGGCCTTTTGAACGGGGCTTCCATGTTTTATTATTACACCCAATGGACATTTACTCTACTTGCAGTATATTTTGCGTGCGGGTCAGTGGTTTCCATGTATGGAGTTCTTATCTGCAACAAAACAAGAAGTGACGGTTTAAATGCTCGTCTTAATGAGAATAGTATGGAGGAAGGGCAACATGTTCCTCTTCTTTGTGGGAAGCCCTCAAATATAATTGGGGGTAATGTAGTTTCATATTCCAAGGAGCAAAGTATTTCCTCGAAGGCTGCCGACATCTGGAGTTACATTTTTGAAGTTCTATTCCAGATAAATGCAGGGGCAGTTGTTCTCACTGATTGCACTTATTGGTTCGTCATATTTCCATTTCTTACGATCAAAGATTACAATTTTACCTTTATGACGATTAATATGCACACGCTGAATTTGGTTCTACTTCTCGGTGAAACTGCTCTTAATAGCTTGTTGCTTCCAATGCCCCGGATTTCATATTTCTTTTTATGGACGGGTGTTTATGTCATTTTCCAGTGGATCATCCATGCATTTGTTTCGATTGGGTGGCCATATCCATTTCTTGATCTGTCAGCTCCTTATTCTCCATTATGGTATCTACTGATGGGGTTGATGCATATTCCGAGCTACGGTATGTCCATGTTGATTTTAGAACTGAAACATAATCTGATATCAAAGTGGTTCCCTCAGACATACCAATGC ATGCTGTACGAAGCTACTGTTGATGCAACGACCCTCGGTTACTGGTTACGCTGGAGGGTACTGTTCTGTGCAATATGTGTATTTGCTTCTTTTTCTGTAGCATTGTGGATGATATGGAAATATGAAATTAAAGATCGACTAGAACACAGAAGACGAGAAACTCAGCAAGATAAAAACCAACTTCGGAGTTGTGAAGCTTGGAGACCATGCGTCAGACAGATTCATCCAATTTGGTTGCTGGCTTTTCGATTTTGTGCTTTCTGTTTGCTGTTGGCTTCACTAATTGTGAAGGGCCTTTTGAACGGGGCTTCCATGTTTTATTATTACACCCAATGGACATTTACTCTACTTGCAGTATATTTTGCGTGCGGGTCAGTGGTTTCCATGTATGGAGTTCTTATCTGCAACAAAACAAGAAGTGACGGTTTAAATGCTCGTCTTAATGAGAATAGTATGGAGGAAGGGCAACATGTTCCTCTTCTTTGTGGGAAGCCCTCAAATATAATTGGGGGTAATGTAGTTTCATATTCCAAGGAGCAAAGTATTTCCTCGAAGGCTGCCGACATCTGGAGTTACATTTTTGAAGTTCTATTCCAGATAAATGCAGGGGCAGTTGTTCTCACTGATTGCACTTATTGGTTCGTCATATTTCCATTTCTTACGATCAAAGATTACAATTTTACCTTTATGACGATTAATATGCACACGCTGAATTTGGTTCTACTTCTCGGTGAAACTGCTCTTAATAGCTTGTTGCTTCCAATGCCCCGGATTTCATATTTCTTTTTATGGACGGGTGTTTATGTCATTTTCCAGTGGATCATCCATGCATTTGTTTCGATTGGGTGGCCATATCCATTTCTTGATCTGTCAGCTCCTTATTCTCCATTATGGTATCTACTGATGGGGTTGATGCATATTCCGAGCTACGGTATGTCCATGTTGATTTTAGAACTGAAACATAATCTGATATCAAAGTGGTTCCCTCAGACATACCAATGC MLYEATVDATTLGYWLRWRVLFCAICVFASFSVALWMIWKYEIKDRLEHRRRETQQDKNQLRSCEAWRPCVRQIHPIWLLAFRFCAFCLLLASLIVKGLLNGASMFYYYTQWTFTLLAVYFACGSVVSMYGVLICNKTRSDGLNARLNENSMEEGQHVPLLCGKPSNIIGGNVVSYSKEQSISSKAADIWSYIFEVLFQINAGAVVLTDCTYWFVIFPFLTIKDYNFTFMTINMHTLNLVLLLGETALNSLLLPMPRISYFFLWTGVYVIFQWIIHAFVSIGWPYPFLDLSAPYSPLWYLLMGLMHIPSYGMSMLILELKHNLISKWFPQTYQC Homology
BLAST of MS016518 vs. NCBI nr
Match: XP_022152202.1 (uncharacterized protein LOC111019978 [Momordica charantia]) HSP 1 Score: 602.1 bits (1551), Expect = 3.0e-168 Identity = 296/299 (99.00%), Postives = 298/299 (99.67%), Query Frame = 0
BLAST of MS016518 vs. NCBI nr
Match: XP_022983923.1 (uncharacterized protein LOC111482400 isoform X1 [Cucurbita maxima]) HSP 1 Score: 564.3 bits (1453), Expect = 7.0e-157 Identity = 270/334 (80.84%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of MS016518 vs. NCBI nr
Match: XP_022983924.1 (uncharacterized protein LOC111482400 isoform X2 [Cucurbita maxima]) HSP 1 Score: 564.3 bits (1453), Expect = 7.0e-157 Identity = 270/334 (80.84%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of MS016518 vs. NCBI nr
Match: XP_023526551.1 (uncharacterized protein LOC111790022 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156 Identity = 270/333 (81.08%), Postives = 301/333 (90.39%), Query Frame = 0
BLAST of MS016518 vs. NCBI nr
Match: XP_023526552.1 (uncharacterized protein LOC111790022 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156 Identity = 270/333 (81.08%), Postives = 301/333 (90.39%), Query Frame = 0
BLAST of MS016518 vs. ExPASy TrEMBL
Match: A0A6J1DFJ5 (uncharacterized protein LOC111019978 OS=Momordica charantia OX=3673 GN=LOC111019978 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.5e-168 Identity = 296/299 (99.00%), Postives = 298/299 (99.67%), Query Frame = 0
BLAST of MS016518 vs. ExPASy TrEMBL
Match: A0A6J1J8Z5 (uncharacterized protein LOC111482400 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482400 PE=4 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 3.4e-157 Identity = 270/334 (80.84%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of MS016518 vs. ExPASy TrEMBL
Match: A0A6J1J931 (uncharacterized protein LOC111482400 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482400 PE=4 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 3.4e-157 Identity = 270/334 (80.84%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of MS016518 vs. ExPASy TrEMBL
Match: A0A6J1F1Y9 (uncharacterized protein LOC111441456 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441456 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 3.2e-155 Identity = 268/333 (80.48%), Postives = 297/333 (89.19%), Query Frame = 0
BLAST of MS016518 vs. ExPASy TrEMBL
Match: A0A6J1F724 (uncharacterized protein LOC111441456 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441456 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 3.2e-155 Identity = 268/333 (80.48%), Postives = 297/333 (89.19%), Query Frame = 0
BLAST of MS016518 vs. TAIR 10
Match: AT3G27770.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 158 Blast hits to 157 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 293.9 bits (751), Expect = 1.6e-79 Identity = 152/325 (46.77%), Postives = 211/325 (64.92%), Query Frame = 0
BLAST of MS016518 vs. TAIR 10
Match: AT5G62960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 291.6 bits (745), Expect = 8.1e-79 Identity = 150/336 (44.64%), Postives = 208/336 (61.90%), Query Frame = 0
BLAST of MS016518 vs. TAIR 10
Match: AT1G10660.2 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 271.2 bits (692), Expect = 1.1e-72 Identity = 147/323 (45.51%), Postives = 208/323 (64.40%), Query Frame = 0
BLAST of MS016518 vs. TAIR 10
Match: AT1G10660.3 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 271.2 bits (692), Expect = 1.1e-72 Identity = 147/323 (45.51%), Postives = 208/323 (64.40%), Query Frame = 0
BLAST of MS016518 vs. TAIR 10
Match: AT1G10660.4 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 271.2 bits (692), Expect = 1.1e-72 Identity = 147/323 (45.51%), Postives = 208/323 (64.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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