Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATTAAAGCAGCCACGAAGAATTTTGATGCTGCAAACAAAGTTGGGGAAGCTAGTTTTGGTGTAGTTTATAAG mRNA sequence ATTAAAGCAGCCACGAAGAATTTTGATGCTGCAAACAAAGTTGGGGAAGCTAGTTTTGGTGTAGTTTATAAG Coding sequence (CDS) ATTAAAGCAGCCACGAAGAATTTTGATGCTGCAAACAAAGTTGGGGAAGCTAGTTTTGGTGTAGTTTATAAG Protein sequence
Homology
BLAST of MS016504 vs. TAIR 10
Match: AT1G53420.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 38.5 bits (88), Expect = 8.9e-04 Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 0
Query: 1 IKAATKNFDAANKVGEASFGVVYK 25
IK AT NFD+AN++GE FG VYK
Sbjct: 617 IKIATNNFDSANRIGEGGFGPVYK 640
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| AT1G53420.1 | 8.9e-04 | 66.67 | Leucine-rich repeat transmembrane protein kinase | [more] |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 3.30.200.20 | Phosphorylase Kinase; domain 1 | coord: 1..24
e-value: 3.5E-6
score: 28.9 |
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
|---|
| MS016504.1 | MS016504.1 | mRNA |
|
