MS016413 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGAGCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGGCCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCTTTGGTTTCT ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGAGCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGGCCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCTTTGGTTTCT ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGAGCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGGCCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCTTTGGTTTCT MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS Homology
BLAST of MS016413 vs. NCBI nr
Match: XP_022140046.1 (uncharacterized protein LOC111010796 [Momordica charantia]) HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of MS016413 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 178.7 bits (452), Expect = 2.8e-41 Identity = 94/113 (83.19%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of MS016413 vs. NCBI nr
Match: KAG7019685.1 (hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.0 bits (445), Expect = 1.8e-40 Identity = 93/113 (82.30%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of MS016413 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39 Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of MS016413 vs. NCBI nr
Match: KGN64527.1 (hypothetical protein Csa_013452 [Cucumis sativus]) HSP 1 Score: 159.8 bits (403), Expect = 1.3e-35 Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of MS016413 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of MS016413 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.7e-40 Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of MS016413 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.5e-36 Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of MS016413 vs. ExPASy TrEMBL
Match: M5WJH3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G022200 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.8e-23 Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 0
BLAST of MS016413 vs. ExPASy TrEMBL
Match: W9RFE3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006294 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 6.3e-23 Identity = 59/98 (60.20%), Postives = 79/98 (80.61%), Query Frame = 0
BLAST of MS016413 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of MS016413 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08 Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of MS016413 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04 Identity = 27/74 (36.49%), Postives = 50/74 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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