
MS016100 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCGCCGGCGAAGATCAAGAAGCCGTTCTCTTCCACTCATATCCATGTGCTTATTACGTCCAAAGCCCCTCCACCGTCTCCCACGCCAACAGCTCCGACATCCGAAACGCGGCCGAGTCGTCAGCCTGCCACTCCCCTCTCCGCTCCGACACCTTTCCCACCGGCCACCACCACCACCACAACGCGACCCAGGAGGCCTCTCGCTTCACCCTCTCCCGCTACTCCTCATCTCGCGGGTCCAACCACGGGGCCGGGACCGACAATGGCGAGGCCCGCCTGATCGTCGGTCGTGGCAACGGCCGTGAGGGGGACGAGGAGCGGGAGGAGGACGGGGCCGGAGACGAGGAAGGGTATTATGGGAAGAAGAGGAGAGGTTGTTGGAAGACATATTTTACGTATAGGAATTCAGATTCAAATGCATGGATTTTATTGCAGCTAAGTTGGAGGGCAATTTTCAGCATGGGAATTGCTTTGCTTGTGTTCTATATTGTCACTAAGCCTCCCTCGCCCAACATTTCTGTTAAGGTAATTTTTTCCTTTTTCCAAAATTCATTTTTTTTTAAATTTTAATATATACGTAGTGGGTAGACCAATGTTAAACTATGTTATTACTGTAAGAGATTCATCTAGCTCAATTTCATGTAGATGTTGTTTTACTATGATTAGAATCTTAACGAAATTTTATTGTTTCATTAAATTTATGAAAATATAAGATAAATGGTTTCAAATAAAATTAGGATTAGAATTTTATAAGAGCTAAAGTTAGGGATACACATGAAAAGAATATATTTTATACGTTGTTTTGATATGATGTGTTCAACTTTTCTTGAAAACTCGTTCTTATCGAAAAAATTAAGGTAAGATTTTTGGAAATAGATACATTAGAAAATTGATCTCATTTGAATAAATGAAGAGGAGGATTTCTTTTTTAAAATAAAAAAAAATTCAATAGGGGTGGAAATTTGAACCTCCAACTTTTTGGTCCAATATACTTAGTTGAACTATACCACTAAAATGGTATAGATCATACGTAATATATTTATTATTATTTTTCTATACTTCTTTGATCTCATCTTACATTTTTTATCTTCACAAATCACAATCCGTATTTATCTTGGTTTTACATATGTTTTTTTTACTTATATTAAATATATTTAATTTGAAATCAAATTTATAAGCTAGTCGAGACAACTTAATTTAATGTATATGTAATTATAAATAAAGATTAGAAAATAAGTGACACTTTTTTTTGTTGAAAAGGTACCAATATATAAAAATACATAATCCTTTGTGCTATTTTAGTAATTCTCTGTTTTTTATTAGAGAAATTATACTAAGTGACATAAAATAAATATGTATTTATAAAAATGTTACTACTTTTTGTATTTTTCTAAAAATGTCAAAATTTGAGTTTTAGTTATTCTGATGTGATTGTATAAATTTATAATTTATGTTATTTTTGTAAAATTTTAAATCTAATGTTCTATATATAAATTTTTCTTTTTTGTACTATTTTAATAATTTTCTCTTATGAGAGGCGGAGAATGAGCTTATTGCATGTTGGAAATGATTTTGCTAATTTGTTTTTAATTATAAAATACTATTTTAAATTTATATTTTACTTCTCTTCTTTGTTTAAATTACAATTTAGTTTGAGAACTTTGAGTTCCATTTAGTTTTTAAATTTAAAACAATGCCAATTTACAATTTTAAAATTTGGATTATGCTCTGAGCTTAACAAAAAATTAATGTTAAATTGTTTATCAAATGATTTAGATGTATTATATTCTTTAACAAATAATAACAAAGATGAATTAAAAAAAATACAAGAATAGTAAACATCTATTTTCAAATAGTTTTATGTTAAAAGATTATATTAAATTATGATTTTTGGTCCTAAACTACAAGACTATAACCAAAATTAAAAAAAAAAATTCCCTTAAAACTTTCAATAATTTCCAAATATATCATTCATACTTTTTAATAGCGAGACACCTAGTCAGAAAGGTTATAAATTTAAATCTTCCACACACTTTGTACTCAAAAAGATAAAATTACTTTTTAATAATTTCCCCAAAACAAAGTTGCAACCAAGAAAGAAAAGAGGGTGATGTATGCCCTTCTTAGTTTCTCGTAATTCAAAAAATATATAATACTTATAATATTTTTTAGTTTTGTCGTGAATTTTTGGAATATTAAAAAGCTATACATATACATACACAAAATTTTATCCCACCCAAAAAAAATTATAGGTCCGCTCTTGCCAAAAACTCAAGTACTTAAAAAAGAAAGGGTTTTTGAGCTAAATAGTCGTGTTTTTTTCTAAGTTAAAATTAAAACATTACATATAGTTTAAGAGCAAAATTGAAACATACGCGAGAATAATGCATATATTTTCAGATGGGAGGAGTGGAAGAATTTATGCTGGGGGAAGGAGTGGACAAAACAGGAGTTGGAACTAAGATTCTAACATGCAATTTCACAATGGATGTAACTGTGGACAATAATTCTAAGCTCTTTGGCCTTCACATTCTTCCTCCATCTCTTCACATCTCATTTGGGCCTCTCCCCATTGCAACTTCTCAAGTAAGCCCTCTTATTCCTACACTATTCATTCTCTTTGTTCCTTTTGCTTAATGTGTTAACAAAGCAGCCACACGGTATCACTGGCGGATGGTGGCTTAGTAGGCTTGTTACCGAATGGAGATACCCCTCCTCGGTTCAAGCCCTACTGGGTGATTTTCCCCCTCCTCTTATTAGGGGATAAGTCCATCAACTTCAGTTACGATAGAGAGGTTTGGACTTTAGAATTGATCGTGTGGGGGGTTTTGAAATAGGGTCCAAGATTGTATGCAGAGAGTGGAACGACGACGTTCCAGTTAAGCGTGGGCACAAGCAATAGGGCAATGTATGGTGCGGGGAGGAGCATGGAAGACATGCTTGAATCAGGAATGGGATTGGAGCTCATGATTCGACTCAATTTCATCTCCAATTATCGGGTGGTTTGGAAGATTATAAGGCCCCACTTTCGTCACCGTGTCGAATGCTCATTGGTTCTCGAGAAAGGATACGATAGGAAGCGTCACACACGATCCTTCAATAGTACTTGCTTAACTTCT ATGGAGGCCGCCGGCGAAGATCAAGAAGCCGTTCTCTTCCACTCATATCCATGTGCTTATTACGTCCAAAGCCCCTCCACCGTCTCCCACGCCAACAGCTCCGACATCCGAAACGCGGCCGAGTCGTCAGCCTGCCACTCCCCTCTCCGCTCCGACACCTTTCCCACCGGCCACCACCACCACCACAACGCGACCCAGGAGGCCTCTCGCTTCACCCTCTCCCGCTACTCCTCATCTCGCGGGTCCAACCACGGGGCCGGGACCGACAATGGCGAGGCCCGCCTGATCGTCGGTCGTGGCAACGGCCGTGAGGGGGACGAGGAGCGGGAGGAGGACGGGGCCGGAGACGAGGAAGGGTATTATGGGAAGAAGAGGAGAGGTTGTTGGAAGACATATTTTACGTATAGGAATTCAGATTCAAATGCATGGATTTTATTGCAGCTAAGTTGGAGGGCAATTTTCAGCATGGGAATTGCTTTGCTTGTGTTCTATATTGTCACTAAGCCTCCCTCGCCCAACATTTCTGTTAAGATGGGAGGAGTGGAAGAATTTATGCTGGGGGAAGGAGTGGACAAAACAGGAGTTGGAACTAAGATTCTAACATGCAATTTCACAATGGATGTAACTGTGGACAATAATTCTAAGCTCTTTGGCCTTCACATTCTTCCTCCATCTCTTCACATCTCATTTGGGCCTCTCCCCATTGCAACTTCTCAAGGTCCAAGATTGTATGCAGAGAGTGGAACGACGACGTTCCAGTTAAGCGTGGGCACAAGCAATAGGGCAATGTATGGTGCGGGGAGGAGCATGGAAGACATGCTTGAATCAGGAATGGGATTGGAGCTCATGATTCGACTCAATTTCATCTCCAATTATCGGGTGGTTTGGAAGATTATAAGGCCCCACTTTCGTCACCGTGTCGAATGCTCATTGGTTCTCGAGAAAGGATACGATAGGAAGCGTCACACACGATCCTTCAATAGTACTTGCTTAACTTCT ATGGAGGCCGCCGGCGAAGATCAAGAAGCCGTTCTCTTCCACTCATATCCATGTGCTTATTACGTCCAAAGCCCCTCCACCGTCTCCCACGCCAACAGCTCCGACATCCGAAACGCGGCCGAGTCGTCAGCCTGCCACTCCCCTCTCCGCTCCGACACCTTTCCCACCGGCCACCACCACCACCACAACGCGACCCAGGAGGCCTCTCGCTTCACCCTCTCCCGCTACTCCTCATCTCGCGGGTCCAACCACGGGGCCGGGACCGACAATGGCGAGGCCCGCCTGATCGTCGGTCGTGGCAACGGCCGTGAGGGGGACGAGGAGCGGGAGGAGGACGGGGCCGGAGACGAGGAAGGGTATTATGGGAAGAAGAGGAGAGGTTGTTGGAAGACATATTTTACGTATAGGAATTCAGATTCAAATGCATGGATTTTATTGCAGCTAAGTTGGAGGGCAATTTTCAGCATGGGAATTGCTTTGCTTGTGTTCTATATTGTCACTAAGCCTCCCTCGCCCAACATTTCTGTTAAGATGGGAGGAGTGGAAGAATTTATGCTGGGGGAAGGAGTGGACAAAACAGGAGTTGGAACTAAGATTCTAACATGCAATTTCACAATGGATGTAACTGTGGACAATAATTCTAAGCTCTTTGGCCTTCACATTCTTCCTCCATCTCTTCACATCTCATTTGGGCCTCTCCCCATTGCAACTTCTCAAGGTCCAAGATTGTATGCAGAGAGTGGAACGACGACGTTCCAGTTAAGCGTGGGCACAAGCAATAGGGCAATGTATGGTGCGGGGAGGAGCATGGAAGACATGCTTGAATCAGGAATGGGATTGGAGCTCATGATTCGACTCAATTTCATCTCCAATTATCGGGTGGTTTGGAAGATTATAAGGCCCCACTTTCGTCACCGTGTCGAATGCTCATTGGTTCTCGAGAAAGGATACGATAGGAAGCGTCACACACGATCCTTCAATAGTACTTGCTTAACTTCT MEAAGEDQEAVLFHSYPCAYYVQSPSTVSHANSSDIRNAAESSACHSPLRSDTFPTGHHHHHNATQEASRFTLSRYSSSRGSNHGAGTDNGEARLIVGRGNGREGDEEREEDGAGDEEGYYGKKRRGCWKTYFTYRNSDSNAWILLQLSWRAIFSMGIALLVFYIVTKPPSPNISVKMGGVEEFMLGEGVDKTGVGTKILTCNFTMDVTVDNNSKLFGLHILPPSLHISFGPLPIATSQGPRLYAESGTTTFQLSVGTSNRAMYGAGRSMEDMLESGMGLELMIRLNFISNYRVVWKIIRPHFRHRVECSLVLEKGYDRKRHTRSFNSTCLTS Homology
BLAST of MS016100 vs. NCBI nr
Match: XP_022152674.1 (uncharacterized protein LOC111020336 [Momordica charantia]) HSP 1 Score: 654.1 bits (1686), Expect = 6.7e-184 Identity = 328/333 (98.50%), Postives = 328/333 (98.50%), Query Frame = 0
BLAST of MS016100 vs. NCBI nr
Match: XP_038905771.1 (uncharacterized protein LOC120091726 [Benincasa hispida]) HSP 1 Score: 567.8 bits (1462), Expect = 6.3e-158 Identity = 289/336 (86.01%), Postives = 301/336 (89.58%), Query Frame = 0
BLAST of MS016100 vs. NCBI nr
Match: XP_008461795.2 (PREDICTED: uncharacterized protein LOC103500312 [Cucumis melo]) HSP 1 Score: 546.6 bits (1407), Expect = 1.5e-151 Identity = 275/330 (83.33%), Postives = 294/330 (89.09%), Query Frame = 0
BLAST of MS016100 vs. NCBI nr
Match: XP_004149613.1 (uncharacterized protein LOC101209149 [Cucumis sativus] >KGN58592.1 hypothetical protein Csa_002328 [Cucumis sativus]) HSP 1 Score: 543.9 bits (1400), Expect = 9.7e-151 Identity = 278/335 (82.99%), Postives = 295/335 (88.06%), Query Frame = 0
BLAST of MS016100 vs. NCBI nr
Match: XP_022934269.1 (uncharacterized protein LOC111441481 [Cucurbita moschata]) HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-143 Identity = 266/335 (79.40%), Postives = 287/335 (85.67%), Query Frame = 0
BLAST of MS016100 vs. ExPASy TrEMBL
Match: A0A6J1DGR2 (uncharacterized protein LOC111020336 OS=Momordica charantia OX=3673 GN=LOC111020336 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 3.2e-184 Identity = 328/333 (98.50%), Postives = 328/333 (98.50%), Query Frame = 0
BLAST of MS016100 vs. ExPASy TrEMBL
Match: A0A1S3CFE9 (uncharacterized protein LOC103500312 OS=Cucumis melo OX=3656 GN=LOC103500312 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 7.3e-152 Identity = 275/330 (83.33%), Postives = 294/330 (89.09%), Query Frame = 0
BLAST of MS016100 vs. ExPASy TrEMBL
Match: A0A0A0LD21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696870 PE=4 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 4.7e-151 Identity = 278/335 (82.99%), Postives = 295/335 (88.06%), Query Frame = 0
BLAST of MS016100 vs. ExPASy TrEMBL
Match: A0A6J1F239 (uncharacterized protein LOC111441481 OS=Cucurbita moschata OX=3662 GN=LOC111441481 PE=4 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 5.6e-144 Identity = 266/335 (79.40%), Postives = 287/335 (85.67%), Query Frame = 0
BLAST of MS016100 vs. ExPASy TrEMBL
Match: A0A6J1J6W9 (uncharacterized protein LOC111481909 OS=Cucurbita maxima OX=3661 GN=LOC111481909 PE=4 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 1.6e-143 Identity = 265/335 (79.10%), Postives = 286/335 (85.37%), Query Frame = 0
BLAST of MS016100 vs. TAIR 10
Match: AT3G08490.1 (BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 205.7 bits (522), Expect = 5.8e-53 Identity = 129/306 (42.16%), Postives = 170/306 (55.56%), Query Frame = 0
BLAST of MS016100 vs. TAIR 10
Match: AT3G24600.1 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 72.8 bits (177), Expect = 5.9e-13 Identity = 48/178 (26.97%), Postives = 87/178 (48.88%), Query Frame = 0
BLAST of MS016100 vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 2.2e-07 Identity = 73/305 (23.93%), Postives = 124/305 (40.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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