MS015811 (gene) Bitter gourd (TR) v1

Overview


Name	MS015811
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GATA zinc finger domain-containing protein 10
Location	scaffold943_2: 108991 .. 111396 (-)
RNA-Seq Expression	MS015811
Synteny	MS015811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACGCTTACCGGAGGAGCTTCTTATATGTGTTTATCCAAGGTACCACCACCATTGCCATTACCTTCCACTTCTTCATTCCCCATTTCTTTGCCAAATCTTCCCAAATTTCCCCGCAATTCCTGCTTCTCTTTGCCTTCCCCTGTCACTGGAACAACAAAAGCTCGCCTCAATCCGTCTTCTCAGGACGACGACTTCGGCGAATCGGTGGAAATGAAGGAGGCGAGCGAGACGCTTTTGTACTCTCTCGCGCCTTTTCCTTTACTGTTCGTTGCTGCTCTTCCTGGAGGTACTCACTTATGGCTTTATTGTGTGGAATCTGCTGCTCTCGAGTGTTTAATGTTGTCTTGAACTTAGATCCTTGGTTTGTAATTTACTTTACCTGAAACTGCTGTCGATGTGTTAGTGGGATTACGAAAGAATAAATTGTTGTGGCTCTGAATTAACAAGAGTGATGCGAAGAAACTTGTTTTCATGCTCACACAAACTCAAGACAAATCGTACGAGATAAGTGAATCGAGCTTCTTGATCTATTCTTTGTCCTTCAAGGCACATTATACCGAACCAAAAAGCTCAAGAATACAAATGTTAATCCATTAACTTCTCTGTGCCTAAAAATGCAGAATCTATTTACTAATGAGGTACAGAATTTATGCACTTCAGGCTTGGTCTTTTTTACACACATACGCTTATGATGGTCCGTACGATTGAATCTCTATAACTTGTGTTTGCCACGAAGAATTTCATGCACTATCCTAAAAAAGCAAGCATGATGCTTCGATTCGGGAATAATTCTAATTTTGAATGGATTCTGCTATTTTCTCAACCCTGTTAATTCACATTTGTTGGCCTCTTTGAGAGTGGATAGACTATTTCTAAGTAGAAAAAACAAGACCCCAAGTCCATTTAGTGGACTAATCCCATTCTGATTGAATAATATTTAAAAATAAGAAAAGAAACCACTGAGACGTTTGGAATAGGGTTAAGATTTTCTAGCAGCCAAAGAATGTATCAGTTAGCTCCTATTTGGTTTTTGCTCATTGAAGAGTTATCCTCTTTTGAAAAAATACATATCGTCCTGTCCTTCCTCTTGTACATGTGTTAATGATATAAAACTATAGTATAATGTTTCTTATCTCATGCACATGAAAGCACAAATGGAAAATATTTTCACTTTTTCGATGCAATCTTTGCACACTTGTCATGAACTTGAATATCCAAATGACAGCTGGAACTGTGAGGTCTCTCTTTGGCCCTTTCGTTGAGCTTGTTAAATCTTGGAATCTTCCTGATTGGCTAGTGCATTGGGGTCATCCAGGCAACATGGTAAGTTCTTTTTGTCTTGCTACTTATGTATGTTAGTAATAGGTTGGATCCAGATTACTGTTATGATAACCTTCTAACTTGGGTTGTGTCCTAATTAGGCAGTAGTGCTCTTCGCTATGGGTGGTTATGGAACATACCTAGGCTTTAGAATCCGTTACTCTGATGATGTGGTAAGAGTATCAACTTTTTTCAGCACTTACGAAGAATTCACCTTTTGCAATTGAATGACAACTTATATTTCAATTGATGCAGGAGGAGAAGGCCAAAGCCAAGGACTTGCATCCAAAGCTTCTAGGTGGAATGTTTTTCTTTTTTGCTCTTGGAGCAACGGGTGGAATCACTTCTCTACTTACATCAGACAAACCTATATTTGAGAGGTACATTGATAAACCAATTTCCCTCCCCCCCTCCTGATTAAAGGGTGTGAAGAATGCAAGCTCTATAAAAGAGTGGAAAACCTTATGTTGCTTACAACCAGTTTTTTTTTGCTTGTCTAACCCTCTTTTTTTAGAATTATTTGGATGGACATACATTTGATCTTCCAAAAGCCAATTCCCATTTTTGTTTCTGAACTACTTTATCAACTTTAACTCCTACCCCAAATTGATTGTTTCTATTAACAAATTATTGAGGTAACAGTGTGCCTAAATGTCTCAGTTTTTAACAGTTCATATGAAGTACTTCAATGAAGGCTTATTAACAAAGTATGAACTTGAAACAACGACTAGTTTATAGACTAAAAACTACTATAAAGTTCAAGGACCAAAATTCAGCTCGGGCAAATGGTTACTTTCTAATTTAGGAAATGCTCAACTTTGCTTTCGTCTTATTTCCAGTCCACATGCTGTAACGGGGTTCATTGGCCTCGCGCTCTTGACTGTACAAACGCTTCTGCCCTCACTTTTTGAGGTAATAGTCAACGCTTGACCTTCATATCCCTACTTCTTGTCCTCTTATTGTGATCTTCATGTGTAGGATAATCCTGGACTGAGGAATGTTCATGGGATTTTGGGTAGTGGAATCATGACACTATTTCTCATCCATGCTGCACTTGGACTTCAACTTGGACTCAGTTAC

mRNA sequence

ATGGCTACGCTTACCGGAGGAGCTTCTTATATGTGTTTATCCAAGGTACCACCACCATTGCCATTACCTTCCACTTCTTCATTCCCCATTTCTTTGCCAAATCTTCCCAAATTTCCCCGCAATTCCTGCTTCTCTTTGCCTTCCCCTGTCACTGGAACAACAAAAGCTCGCCTCAATCCGTCTTCTCAGGACGACGACTTCGGCGAATCGGTGGAAATGAAGGAGGCGAGCGAGACGCTTTTGTACTCTCTCGCGCCTTTTCCTTTACTGTTCGTTGCTGCTCTTCCTGGAGCTGGAACTGTGAGGTCTCTCTTTGGCCCTTTCGTTGAGCTTGTTAAATCTTGGAATCTTCCTGATTGGCTAGTGCATTGGGGTCATCCAGGCAACATGGCAGTAGTGCTCTTCGCTATGGGTGGTTATGGAACATACCTAGGCTTTAGAATCCGTTACTCTGATGATGTGGAGGAGAAGGCCAAAGCCAAGGACTTGCATCCAAAGCTTCTAGGTGGAATGTTTTTCTTTTTTGCTCTTGGAGCAACGGGTGGAATCACTTCTCTACTTACATCAGACAAACCTATATTTGAGAGTCCACATGCTGTAACGGGGTTCATTGGCCTCGCGCTCTTGACTGTACAAACGCTTCTGCCCTCACTTTTTGAGGATAATCCTGGACTGAGGAATGTTCATGGGATTTTGGGTAGTGGAATCATGACACTATTTCTCATCCATGCTGCACTTGGACTTCAACTTGGACTCAGTTAC

Coding sequence (CDS)

ATGGCTACGCTTACCGGAGGAGCTTCTTATATGTGTTTATCCAAGGTACCACCACCATTGCCATTACCTTCCACTTCTTCATTCCCCATTTCTTTGCCAAATCTTCCCAAATTTCCCCGCAATTCCTGCTTCTCTTTGCCTTCCCCTGTCACTGGAACAACAAAAGCTCGCCTCAATCCGTCTTCTCAGGACGACGACTTCGGCGAATCGGTGGAAATGAAGGAGGCGAGCGAGACGCTTTTGTACTCTCTCGCGCCTTTTCCTTTACTGTTCGTTGCTGCTCTTCCTGGAGCTGGAACTGTGAGGTCTCTCTTTGGCCCTTTCGTTGAGCTTGTTAAATCTTGGAATCTTCCTGATTGGCTAGTGCATTGGGGTCATCCAGGCAACATGGCAGTAGTGCTCTTCGCTATGGGTGGTTATGGAACATACCTAGGCTTTAGAATCCGTTACTCTGATGATGTGGAGGAGAAGGCCAAAGCCAAGGACTTGCATCCAAAGCTTCTAGGTGGAATGTTTTTCTTTTTTGCTCTTGGAGCAACGGGTGGAATCACTTCTCTACTTACATCAGACAAACCTATATTTGAGAGTCCACATGCTGTAACGGGGTTCATTGGCCTCGCGCTCTTGACTGTACAAACGCTTCTGCCCTCACTTTTTGAGGATAATCCTGGACTGAGGAATGTTCATGGGATTTTGGGTAGTGGAATCATGACACTATTTCTCATCCATGCTGCACTTGGACTTCAACTTGGACTCAGTTAC

Protein sequence

MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNPSSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLFLIHAALGLQLGLSY

Homology

[Close]

BLAST of MS015811 vs. NCBI nr
Match: XP_022143716.1 (uncharacterized protein LOC111013557 [Momordica charantia] >XP_022143717.1 uncharacterized protein LOC111013557 [Momordica charantia])

HSP 1 Score: 513.5 bits (1321), Expect = 1.1e-141
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 1   MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNP 60
           MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNP
Sbjct: 1   MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNP 60

Query: 61  SSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDW 120
           SSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDW
Sbjct: 61  SSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDW 120

Query: 121 LVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGAT 180
           LVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGAT
Sbjct: 121 LVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGAT 180

Query: 181 GGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLF 240
           GGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLF
Sbjct: 181 GGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLF 240

Query: 241 LIHAALGLQLGLSY 255
           LIHAALGLQLGL Y
Sbjct: 241 LIHAALGLQLGLGY 254

[Close]

BLAST of MS015811 vs. NCBI nr
Match: XP_038880983.1 (uncharacterized protein LOC120072635 [Benincasa hispida])

HSP 1 Score: 429.1 bits (1102), Expect = 2.7e-116
Identity = 220/259 (84.94%), Postives = 232/259 (89.58%), Query Frame = 0


Query: 1   MATLT----GGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKA 60
           MATLT      +SYMCL+KV  P PLPST SFPIS P  PK PR+S FSL SPVT  T  
Sbjct: 1   MATLTAASSSSSSYMCLTKVSSP-PLPST-SFPISFPYHPKLPRDSSFSLASPVTSRTSV 60

Query: 61  RLNPS-SQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSW 120
           R NPS ++DD+FG+ VEMKE SET LYSL+PFPLLF+AALPGAGTVRSLFGPFVELVKSW
Sbjct: 61  RFNPSFARDDEFGDFVEMKETSETRLYSLSPFPLLFIAALPGAGTVRSLFGPFVELVKSW 120

Query: 121 NLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFF 180
           NLP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSD+VEEKA AKDLHPKLLGGMFFFF
Sbjct: 121 NLPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDNVEEKANAKDLHPKLLGGMFFFF 180

Query: 181 ALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSG 240
           ALGATGGITSLLTSDKPIFESPHAVTGFIGL LLTVQTLLPSLFE+NPGLRNVHGILGSG
Sbjct: 181 ALGATGGITSLLTSDKPIFESPHAVTGFIGLTLLTVQTLLPSLFENNPGLRNVHGILGSG 240

Query: 241 IMTLFLIHAALGLQLGLSY 255
           IMTLFLIHAALGLQLGLSY
Sbjct: 241 IMTLFLIHAALGLQLGLSY 257

[Close]

BLAST of MS015811 vs. NCBI nr
Match: XP_022925916.1 (uncharacterized protein LOC111433189 [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 3.8e-115
Identity = 216/257 (84.05%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MATLTG---GASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKAR 60
           MATLTG    +SYMCL+KV PP    S++SFPI LPNL K PR+S FSL SPVTG  K R
Sbjct: 1   MATLTGASSSSSYMCLTKVLPPF---SSTSFPILLPNLSKVPRDSSFSLASPVTGRRKVR 60

Query: 61  LNPS-SQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120
            +PS ++D +FG+ VEM+E  ET LYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN
Sbjct: 61  FSPSFARDREFGDLVEMRETRETRLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120

Query: 121 LPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFA 180
           LP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYS+DVEEKA AKDLHPKLLGGMFFFFA
Sbjct: 121 LPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSNDVEEKANAKDLHPKLLGGMFFFFA 180

Query: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGI 240
           LGATGGITSLLTSDKPIFESPHAVTGFIGLALLT+Q+LLPSLFEDNPGLRN+HGILGSGI
Sbjct: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTLQSLLPSLFEDNPGLRNIHGILGSGI 240

Query: 241 MTLFLIHAALGLQLGLS 254
           MTLFLIHAALGLQLGLS
Sbjct: 241 MTLFLIHAALGLQLGLS 254

[Close]

BLAST of MS015811 vs. NCBI nr
Match: KAG6604398.1 (hypothetical protein SDJN03_05007, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 216/261 (82.76%), Postives = 232/261 (88.89%), Query Frame = 0


Query: 1   MATLTG-------GASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGT 60
           MATLTG        +SYMCL+KV PP    S++SFPI LPNL K PR+S FSL SPVTG 
Sbjct: 1   MATLTGASSSSSSSSSYMCLTKVLPPF---SSTSFPILLPNLSKVPRDSSFSLASPVTGR 60

Query: 61  TKARLNPS-SQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELV 120
            K R +PS ++D +FG+ VEM+E  ET LYSLAPFPLLFVAALPGAGTVRSLFGPFVELV
Sbjct: 61  RKVRFSPSFARDREFGDLVEMRETRETRLYSLAPFPLLFVAALPGAGTVRSLFGPFVELV 120

Query: 121 KSWNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMF 180
           KSWNLP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYS+DVEEKA AKDLHPKLLGGMF
Sbjct: 121 KSWNLPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSNDVEEKANAKDLHPKLLGGMF 180

Query: 181 FFFALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGIL 240
           FFFALGATGGITSLLTSDKPIFESPHAVTGFIGLALLT+Q+LLPSLFEDNPGLRN+HGIL
Sbjct: 181 FFFALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTLQSLLPSLFEDNPGLRNIHGIL 240

Query: 241 GSGIMTLFLIHAALGLQLGLS 254
           GSGIMTLFLIHAALGLQLGLS
Sbjct: 241 GSGIMTLFLIHAALGLQLGLS 258

[Close]

BLAST of MS015811 vs. NCBI nr
Match: XP_022977650.1 (uncharacterized protein LOC111477900 [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 7.2e-114
Identity = 215/257 (83.66%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MATLTG---GASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKAR 60
           MATLTG    +SYMCL+KV PP    S++SFPI LP L K PR+S FSL SPVTG  K R
Sbjct: 1   MATLTGASSSSSYMCLTKVLPPF---SSTSFPILLPYLSKVPRDSPFSLASPVTGRRKVR 60

Query: 61  LNPS-SQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120
            NPS ++D +FG+ VE +E  ET LYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN
Sbjct: 61  FNPSFARDREFGDLVETRETRETRLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120

Query: 121 LPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFA 180
           LP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYS+DVEEKA AKDLHPKLLGGMFFFFA
Sbjct: 121 LPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSNDVEEKANAKDLHPKLLGGMFFFFA 180

Query: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGI 240
           LGATGGITSLLTSDKPIFESPHAVTGFIGLALLT+Q+LLPSLFEDNPGLRN+HGILGSGI
Sbjct: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTLQSLLPSLFEDNPGLRNIHGILGSGI 240

Query: 241 MTLFLIHAALGLQLGLS 254
           MTLFLIHAALGLQLGLS
Sbjct: 241 MTLFLIHAALGLQLGLS 254

[Close]

BLAST of MS015811 vs. ExPASy TrEMBL
Match: A0A6J1CRM9 (uncharacterized protein LOC111013557 OS=Momordica charantia OX=3673 GN=LOC111013557 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 5.2e-142
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 1   MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNP 60
           MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNP
Sbjct: 1   MATLTGGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKARLNP 60

Query: 61  SSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDW 120
           SSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDW
Sbjct: 61  SSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWNLPDW 120

Query: 121 LVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGAT 180
           LVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGAT
Sbjct: 121 LVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFALGAT 180

Query: 181 GGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLF 240
           GGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLF
Sbjct: 181 GGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGIMTLF 240

Query: 241 LIHAALGLQLGLSY 255
           LIHAALGLQLGL Y
Sbjct: 241 LIHAALGLQLGLGY 254

[Close]

BLAST of MS015811 vs. ExPASy TrEMBL
Match: A0A6J1EDG7 (uncharacterized protein LOC111433189 OS=Cucurbita moschata OX=3662 GN=LOC111433189 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.9e-115
Identity = 216/257 (84.05%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MATLTG---GASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKAR 60
           MATLTG    +SYMCL+KV PP    S++SFPI LPNL K PR+S FSL SPVTG  K R
Sbjct: 1   MATLTGASSSSSYMCLTKVLPPF---SSTSFPILLPNLSKVPRDSSFSLASPVTGRRKVR 60

Query: 61  LNPS-SQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120
            +PS ++D +FG+ VEM+E  ET LYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN
Sbjct: 61  FSPSFARDREFGDLVEMRETRETRLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120

Query: 121 LPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFA 180
           LP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYS+DVEEKA AKDLHPKLLGGMFFFFA
Sbjct: 121 LPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSNDVEEKANAKDLHPKLLGGMFFFFA 180

Query: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGI 240
           LGATGGITSLLTSDKPIFESPHAVTGFIGLALLT+Q+LLPSLFEDNPGLRN+HGILGSGI
Sbjct: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTLQSLLPSLFEDNPGLRNIHGILGSGI 240

Query: 241 MTLFLIHAALGLQLGLS 254
           MTLFLIHAALGLQLGLS
Sbjct: 241 MTLFLIHAALGLQLGLS 254

[Close]

BLAST of MS015811 vs. ExPASy TrEMBL
Match: A0A6J1IMY7 (uncharacterized protein LOC111477900 OS=Cucurbita maxima OX=3661 GN=LOC111477900 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.5e-114
Identity = 215/257 (83.66%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MATLTG---GASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRNSCFSLPSPVTGTTKAR 60
           MATLTG    +SYMCL+KV PP    S++SFPI LP L K PR+S FSL SPVTG  K R
Sbjct: 1   MATLTGASSSSSYMCLTKVLPPF---SSTSFPILLPYLSKVPRDSPFSLASPVTGRRKVR 60

Query: 61  LNPS-SQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120
            NPS ++D +FG+ VE +E  ET LYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN
Sbjct: 61  FNPSFARDREFGDLVETRETRETRLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKSWN 120

Query: 121 LPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFFFA 180
           LP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYS+DVEEKA AKDLHPKLLGGMFFFFA
Sbjct: 121 LPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSNDVEEKANAKDLHPKLLGGMFFFFA 180

Query: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGSGI 240
           LGATGGITSLLTSDKPIFESPHAVTGFIGLALLT+Q+LLPSLFEDNPGLRN+HGILGSGI
Sbjct: 181 LGATGGITSLLTSDKPIFESPHAVTGFIGLALLTLQSLLPSLFEDNPGLRNIHGILGSGI 240

Query: 241 MTLFLIHAALGLQLGLS 254
           MTLFLIHAALGLQLGLS
Sbjct: 241 MTLFLIHAALGLQLGLS 254

[Close]

BLAST of MS015811 vs. ExPASy TrEMBL
Match: A0A1S3CHJ9 (uncharacterized protein LOC103500827 OS=Cucumis melo OX=3656 GN=LOC103500827 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109
Identity = 212/263 (80.61%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 1   MATLT------GGASYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRN-SCFSLPSPVTGT 60
           MATLT        +SYMCL+KV PPLP   ++SFPI  P LPK PRN S FS  SP+   
Sbjct: 1   MATLTAASFSSSSSSYMCLTKVSPPLP---STSFPIPFPTLPKTPRNSSSFSFASPLPSR 60

Query: 61  TKARLNPS-SQDDDFGESVEMK-EASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVEL 120
           T  R NP  +++D FG+ VEMK E SE  LYSL+PFPLLF+AALPG GTVRSLFGPFVEL
Sbjct: 61  TSLRFNPCFARNDHFGDFVEMKEETSEMRLYSLSPFPLLFIAALPGGGTVRSLFGPFVEL 120

Query: 121 VKSWNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGM 180
           VKS NLP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKA AKDLHPKLLGGM
Sbjct: 121 VKSLNLPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAYAKDLHPKLLGGM 180

Query: 181 FFFFALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGI 240
           FFFFALGATGGI SLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGI
Sbjct: 181 FFFFALGATGGIISLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGI 240

Query: 241 LGSGIMTLFLIHAALGLQLGLSY 255
           LGSGIMTLFLIHAA GLQLGLSY
Sbjct: 241 LGSGIMTLFLIHAAFGLQLGLSY 260

[Close]

BLAST of MS015811 vs. ExPASy TrEMBL
Match: A0A0A0KIF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446520 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.2e-107
Identity = 210/263 (79.85%), Postives = 223/263 (84.79%), Query Frame = 0


Query: 1   MATLTGGA---SYMCLSKVPPPLPLPSTSSFPISLPNLPKFPRN----SCFSLPSPVTGT 60
           MATLT  +   SY+CL+KV P  PLPSTS       NLPK PRN    S FS  SP+   
Sbjct: 1   MATLTAPSSSFSYICLTKVSP--PLPSTSL------NLPKIPRNSSSSSSFSFASPLPLR 60

Query: 61  TKARLNPS-SQDDDFGESVEMK-EASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVEL 120
           T  R NPS +++D+FG+  E K E SE  LYSL+PFPLLF+AALPGAGTVRSLFGPFVEL
Sbjct: 61  TSVRFNPSFARNDEFGDFEETKEETSEMRLYSLSPFPLLFIAALPGAGTVRSLFGPFVEL 120

Query: 121 VKSWNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGM 180
           VKSWNLP+WLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKA AKDLHPKLLGGM
Sbjct: 121 VKSWNLPEWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAYAKDLHPKLLGGM 180

Query: 181 FFFFALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGI 240
           FFFFALGATGG+TSLLTSDKPI ESPHAVTGFIGL LLTVQTLLPSLFEDNPGLRNVHGI
Sbjct: 181 FFFFALGATGGVTSLLTSDKPILESPHAVTGFIGLTLLTVQTLLPSLFEDNPGLRNVHGI 240

Query: 241 LGSGIMTLFLIHAALGLQLGLSY 255
           LGSGIMTLFLIHAALGLQLGLSY
Sbjct: 241 LGSGIMTLFLIHAALGLQLGLSY 255

[Close]

BLAST of MS015811 vs. TAIR 10
Match: AT2G36885.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to 172 proteins in 58 species: Archae - 0; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). )

HSP 1 Score: 315.8 bits (808), Expect = 3.1e-86
Identity = 169/260 (65.00%), Postives = 199/260 (76.54%), Query Frame = 0


Query: 1   MATLTGGASYMCLSKVPPPLPLPST----SSFPIS-LPNLPKFPRNSCFSLPS-PVTGTT 60
           MA +TG ++    + + P   LPS+    S+  +S   N+  FP  S F     P+T   
Sbjct: 1   MAAITGFSALS--NHISPASSLPSSRLLNSTQCLSRFSNVSSFPALSTFRRRKIPLTPAC 60

Query: 61  KARLNPSSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKS 120
            + ++   + +  G+  +  E  ETL+ S++P PLL VA+LPGA TVRS+FGP VE+VKS
Sbjct: 61  SSIVDGDEEIEARGD--DENEIRETLMLSVSPLPLLLVASLPGAETVRSVFGPVVEIVKS 120

Query: 121 WNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFF 180
            NLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDD+EEKAKAKDLHPKLL GMFFF
Sbjct: 121 LNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDIEEKAKAKDLHPKLLAGMFFF 180

Query: 181 FALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGS 240
           FALGATGG+ SLLTSDKPIFESPHAVTG IGL LLTVQT+LPSLF++ P LRNVHGILGS
Sbjct: 181 FALGATGGVISLLTSDKPIFESPHAVTGLIGLGLLTVQTILPSLFKEKPELRNVHGILGS 240

Query: 241 GIMTLFLIHAALGLQLGLSY 255
           GIM LFL+HAA GLQLGLS+
Sbjct: 241 GIMALFLVHAAFGLQLGLSF 256

[Close]

BLAST of MS015811 vs. TAIR 10
Match: AT2G36885.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-84
Identity = 169/260 (65.00%), Postives = 198/260 (76.15%), Query Frame = 0


Query: 1   MATLTGGASYMCLSKVPPPLPLPST----SSFPIS-LPNLPKFPRNSCFSLPS-PVTGTT 60
           MA +TG ++    + + P   LPS+    S+  +S   N+  FP  S F     P+T   
Sbjct: 1   MAAITGFSALS--NHISPASSLPSSRLLNSTQCLSRFSNVSSFPALSTFRRRKIPLTPAC 60

Query: 61  KARLNPSSQDDDFGESVEMKEASETLLYSLAPFPLLFVAALPGAGTVRSLFGPFVELVKS 120
            + ++   + +  G+  +  E  ETL+ S++P PLL VA+LPGA TVRS+FGP VE+VKS
Sbjct: 61  SSIVDGDEEIEARGD--DENEIRETLMLSVSPLPLLLVASLPGAETVRSVFGPVVEIVKS 120

Query: 121 WNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDVEEKAKAKDLHPKLLGGMFFF 180
            NLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDD+EEKAKAKDLHPKLL GMFFF
Sbjct: 121 LNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDIEEKAKAKDLHPKLLAGMFFF 180

Query: 181 FALGATGGITSLLTSDKPIFESPHAVTGFIGLALLTVQTLLPSLFEDNPGLRNVHGILGS 240
           FALGATGG+ SLLTSDKPIFESPHAVTG IGL LLTVQT+LPSLF+  P LRNVHGILGS
Sbjct: 181 FALGATGGVISLLTSDKPIFESPHAVTGLIGLGLLTVQTILPSLFK-KPELRNVHGILGS 240

Query: 241 GIMTLFLIHAALGLQLGLSY 255
           GIM LFL+HAA GLQLGLS+
Sbjct: 241 GIMALFLVHAAFGLQLGLSF 255

The following BLAST results are available for this feature:

BLAST of MS015811 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143716.1	1.1e-141	99.61	uncharacterized protein LOC111013557 [Momordica charantia] >XP_022143717.1 uncha...	[more]
XP_038880983.1	2.7e-116	84.94	uncharacterized protein LOC120072635 [Benincasa hispida]	[more]
XP_022925916.1	3.8e-115	84.05	uncharacterized protein LOC111433189 [Cucurbita moschata]	[more]
KAG6604398.1	1.1e-114	82.76	hypothetical protein SDJN03_05007, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977650.1	7.2e-114	83.66	uncharacterized protein LOC111477900 [Cucurbita maxima]	[more]

BLAST of MS015811 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRM9	5.2e-142	99.61	uncharacterized protein LOC111013557 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1EDG7	1.9e-115	84.05	uncharacterized protein LOC111433189 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A6J1IMY7	3.5e-114	83.66	uncharacterized protein LOC111477900 OS=Cucurbita maxima OX=3661 GN=LOC111477900...	[more]
A0A1S3CHJ9	2.0e-109	80.61	uncharacterized protein LOC103500827 OS=Cucumis melo OX=3656 GN=LOC103500827 PE=...	[more]
A0A0A0KIF5	4.2e-107	79.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446520 PE=4 SV=1	[more]

BLAST of MS015811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36885.1	3.1e-86	65.00	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]
AT2G36885.2	1.7e-84	65.00	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025067	Protein of unknown function DUF4079	PFAM	PF13301	DUF4079	coord: 122..253 e-value: 1.8E-21 score: 76.8
None	No IPR available	GENE3D	1.20.120.1770		coord: 86..254 e-value: 1.3E-5 score: 26.4
None	No IPR available	PANTHER	PTHR36738	EXPRESSED PROTEIN	coord: 65..254
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 111..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015811.1	MS015811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0016020	membrane