MS015447 (gene) Bitter gourd (TR) v1

Overview
NameMS015447
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFanconi-associated nuclease
Locationscaffold424: 84583 .. 85092 (-)
RNA-Seq ExpressionMS015447
SyntenyMS015447
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTGTGGTTTCCAGATGCATGCTTATCTAGGGGAACGAAGCGGAAGTTGACACAGAGCACTCTTCTTCAATTAAACTTCTCTCCTCGATCAAAAGTTAAGCATCAATCTTGTGTTCTGAAATTAGAGAAAAATGAGTCTTCTGCAGATCCTGATGACGATCTAATGGAAAGTGTTGTCCACAGACTGCCTACAAATGCCTCTCATAATGAAAGTAGTGACAAAATTCTGTGTGAATCATTAGTAGAATGTGTAGAGCAGCGACAGAGGGACTGTCTATTGGATACCCCAGATAATAGTGAAAGAACTAATGGTGCTACAGAAATTTGTTCTCCCAAGAATAAAGGAATTACATCTGAGATCGTTACTGACAAGGATGATTTATCTGGGGTGATTCTTGAAACTTATATTGTTGGTCGTAAGTTTAGTGATGAAAAGGAGTTAAATCTTGGGGCAAACATCTCTCTTGAAAGAGATCCTACCAATGTAAAGGATCCCAATGCCATCAAG

mRNA sequence

ACTTTGTGGTTTCCAGATGCATGCTTATCTAGGGGAACGAAGCGGAAGTTGACACAGAGCACTCTTCTTCAATTAAACTTCTCTCCTCGATCAAAAGTTAAGCATCAATCTTGTGTTCTGAAATTAGAGAAAAATGAGTCTTCTGCAGATCCTGATGACGATCTAATGGAAAGTGTTGTCCACAGACTGCCTACAAATGCCTCTCATAATGAAAGTAGTGACAAAATTCTGTGTGAATCATTAGTAGAATGTGTAGAGCAGCGACAGAGGGACTGTCTATTGGATACCCCAGATAATAGTGAAAGAACTAATGGTGCTACAGAAATTTGTTCTCCCAAGAATAAAGGAATTACATCTGAGATCGTTACTGACAAGGATGATTTATCTGGGGTGATTCTTGAAACTTATATTGTTGGTCGTAAGTTTAGTGATGAAAAGGAGTTAAATCTTGGGGCAAACATCTCTCTTGAAAGAGATCCTACCAATGTAAAGGATCCCAATGCCATCAAG

Coding sequence (CDS)

ACTTTGTGGTTTCCAGATGCATGCTTATCTAGGGGAACGAAGCGGAAGTTGACACAGAGCACTCTTCTTCAATTAAACTTCTCTCCTCGATCAAAAGTTAAGCATCAATCTTGTGTTCTGAAATTAGAGAAAAATGAGTCTTCTGCAGATCCTGATGACGATCTAATGGAAAGTGTTGTCCACAGACTGCCTACAAATGCCTCTCATAATGAAAGTAGTGACAAAATTCTGTGTGAATCATTAGTAGAATGTGTAGAGCAGCGACAGAGGGACTGTCTATTGGATACCCCAGATAATAGTGAAAGAACTAATGGTGCTACAGAAATTTGTTCTCCCAAGAATAAAGGAATTACATCTGAGATCGTTACTGACAAGGATGATTTATCTGGGGTGATTCTTGAAACTTATATTGTTGGTCGTAAGTTTAGTGATGAAAAGGAGTTAAATCTTGGGGCAAACATCTCTCTTGAAAGAGATCCTACCAATGTAAAGGATCCCAATGCCATCAAG

Protein sequence

TLWFPDACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPTNASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDKDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK
Homology
BLAST of MS015447 vs. NCBI nr
Match: XP_022155222.1 (fanconi-associated nuclease 1 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 327.0 bits (837), Expect = 9.5e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT
Sbjct: 89  DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
           NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK
Sbjct: 149 NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 208

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK
Sbjct: 209 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 253

BLAST of MS015447 vs. NCBI nr
Match: XP_038889850.1 (fanconi-associated nuclease 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 2.4e-57
Identity = 123/165 (74.55%), Postives = 138/165 (83.64%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRG KRKLTQSTLLQLNF  RSKV+HQS VLK EKNESS  P D LM   VH+LP 
Sbjct: 89  DACLSRGRKRKLTQSTLLQLNFCSRSKVQHQSHVLKSEKNESSVGPGDSLMHRNVHKLPK 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
           +ASH E +D+I+CE LVEC  + Q+DCLLDT +N ERTN A+EICSPKNK ITS +VT K
Sbjct: 149 DASHIE-NDEIICEPLVECSIRPQKDCLLDTLNNCERTNDASEICSPKNKRITSGMVTAK 208

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           DDLSG+IL+T+IVGRKFSDEKELNLG +ISLERDPTNV DPNAIK
Sbjct: 209 DDLSGMILQTFIVGRKFSDEKELNLGESISLERDPTNVNDPNAIK 252

BLAST of MS015447 vs. NCBI nr
Match: XP_038889851.1 (fanconi-associated nuclease 1 homolog isoform X3 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 2.4e-57
Identity = 123/165 (74.55%), Postives = 138/165 (83.64%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRG KRKLTQSTLLQLNF  RSKV+HQS VLK EKNESS  P D LM   VH+LP 
Sbjct: 89  DACLSRGRKRKLTQSTLLQLNFCSRSKVQHQSHVLKSEKNESSVGPGDSLMHRNVHKLPK 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
           +ASH E +D+I+CE LVEC  + Q+DCLLDT +N ERTN A+EICSPKNK ITS +VT K
Sbjct: 149 DASHIE-NDEIICEPLVECSIRPQKDCLLDTLNNCERTNDASEICSPKNKRITSGMVTAK 208

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           DDLSG+IL+T+IVGRKFSDEKELNLG +ISLERDPTNV DPNAIK
Sbjct: 209 DDLSGMILQTFIVGRKFSDEKELNLGESISLERDPTNVNDPNAIK 252

BLAST of MS015447 vs. NCBI nr
Match: XP_038889849.1 (fanconi-associated nuclease 1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 2.4e-57
Identity = 123/165 (74.55%), Postives = 138/165 (83.64%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRG KRKLTQSTLLQLNF  RSKV+HQS VLK EKNESS  P D LM   VH+LP 
Sbjct: 89  DACLSRGRKRKLTQSTLLQLNFCSRSKVQHQSHVLKSEKNESSVGPGDSLMHRNVHKLPK 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
           +ASH E +D+I+CE LVEC  + Q+DCLLDT +N ERTN A+EICSPKNK ITS +VT K
Sbjct: 149 DASHIE-NDEIICEPLVECSIRPQKDCLLDTLNNCERTNDASEICSPKNKRITSGMVTAK 208

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           DDLSG+IL+T+IVGRKFSDEKELNLG +ISLERDPTNV DPNAIK
Sbjct: 209 DDLSGMILQTFIVGRKFSDEKELNLGESISLERDPTNVNDPNAIK 252

BLAST of MS015447 vs. NCBI nr
Match: XP_022949023.1 (fanconi-associated nuclease 1 homolog [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 5.5e-57
Identity = 126/166 (75.90%), Postives = 141/166 (84.94%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRGTKRKLTQS+LLQLNF  R KV+H S VLK EKNESS  PDD  ++ +VHRLP 
Sbjct: 89  DACLSRGTKRKLTQSSLLQLNFYSRPKVQHHSHVLKFEKNESSVSPDDGPVD-IVHRLPK 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIV-TD 125
           +AS+NE +DKI C SL EC  Q QRDCLLD+ +NSERTNGATEI SP NKG TS +V T+
Sbjct: 149 DASYNE-NDKIKCGSLEECAMQPQRDCLLDSLNNSERTNGATEIYSPMNKGATSGMVTTN 208

Query: 126 KDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           KDDLSG+ILET+IVGRKFSDEKELNLGA+ISLERDPTNVKDPNAIK
Sbjct: 209 KDDLSGMILETFIVGRKFSDEKELNLGASISLERDPTNVKDPNAIK 252

BLAST of MS015447 vs. ExPASy Swiss-Prot
Match: Q5SNL7 (Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0171800 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12
Identity = 61/188 (32.45%), Postives = 87/188 (46.28%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D CL+RGTKRKLTQSTLL  +FS ++   +    L         +P D  + S       
Sbjct: 85  DICLTRGTKRKLTQSTLLDFSFSRKATDDYALNNLNTSDEAEHMEPTDGNVSS------D 144

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSE------------------RTNGAT 125
            A  + ++DK+  +            CL  +PD SE                    NG  
Sbjct: 145 GAFFSLNNDKVNSKG---SANASSPGCLHGSPDISETCDTCLPPNVLLPYTENTANNGVV 204

Query: 126 EIC---SPKNKGITSEI--VTDKDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTN 171
           + C    P     +S I  ++  D  + V+++T IVGR+F +  EL  GA+I+L RDP N
Sbjct: 205 KKCLSHMPSTDATSSTIGLLSVTDSSNSVVVDTVIVGRRFHENIELQEGASITLLRDPQN 263

BLAST of MS015447 vs. ExPASy Swiss-Prot
Match: Q5XVJ4 (Fanconi-associated nuclease 1 homolog OS=Arabidopsis thaliana OX=3702 GN=FAN1 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 2.6e-09
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D  LS   KR+LTQ+TLLQ +F    K      V+  +  + S    +    S+V R   
Sbjct: 70  DLSLSTRKKRRLTQTTLLQSSFLSVPKQLEDGLVICTQ--QKSILDSETFEFSLVQR--- 129

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
               +E S+ I C+                  D S         CSP  +     +  D+
Sbjct: 130 ----SEPSESICCK----------------VEDGS---------CSPSREESLKTVTLDE 189

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           D  +G  +ET+IVGRKFSD ++L +G +I L R P NVKD NAIK
Sbjct: 190 D--NGEAIETFIVGRKFSDVQDLEIGGDIFLLRHPENVKDRNAIK 198

BLAST of MS015447 vs. ExPASy TrEMBL
Match: A0A6J1DNS1 (Fanconi-associated nuclease OS=Momordica charantia OX=3673 GN=LOC111022365 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT
Sbjct: 89  DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
           NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK
Sbjct: 149 NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 208

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK
Sbjct: 209 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 253

BLAST of MS015447 vs. ExPASy TrEMBL
Match: A0A6J1GAX8 (Fanconi-associated nuclease OS=Cucurbita moschata OX=3662 GN=LOC111452490 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.6e-57
Identity = 126/166 (75.90%), Postives = 141/166 (84.94%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRGTKRKLTQS+LLQLNF  R KV+H S VLK EKNESS  PDD  ++ +VHRLP 
Sbjct: 89  DACLSRGTKRKLTQSSLLQLNFYSRPKVQHHSHVLKFEKNESSVSPDDGPVD-IVHRLPK 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIV-TD 125
           +AS+NE +DKI C SL EC  Q QRDCLLD+ +NSERTNGATEI SP NKG TS +V T+
Sbjct: 149 DASYNE-NDKIKCGSLEECAMQPQRDCLLDSLNNSERTNGATEIYSPMNKGATSGMVTTN 208

Query: 126 KDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           KDDLSG+ILET+IVGRKFSDEKELNLGA+ISLERDPTNVKDPNAIK
Sbjct: 209 KDDLSGMILETFIVGRKFSDEKELNLGASISLERDPTNVKDPNAIK 252

BLAST of MS015447 vs. ExPASy TrEMBL
Match: A0A6J1KFS7 (Fanconi-associated nuclease OS=Cucurbita maxima OX=3661 GN=LOC111492828 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 127/166 (76.51%), Postives = 138/166 (83.13%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           DACLSRGTKRKLTQS+LLQLNF  R KV+H S VLK EKNESS  PDD  ++ +VHRLP 
Sbjct: 89  DACLSRGTKRKLTQSSLLQLNFYSRPKVQHHSHVLKFEKNESSVGPDDGPVD-IVHRLPK 148

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIV-TD 125
           +AS+NE +DKI C SL EC  Q QRDCLLDT  NSERTNGATEI SP NKG TS +V T 
Sbjct: 149 DASYNE-NDKIKCGSLEECAMQPQRDCLLDTLHNSERTNGATEIYSPMNKGATSGMVTTT 208

Query: 126 KDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           KDDLSG+ILET+IVGRKFSDEKELNLGA ISLERDPTNVKDPNAIK
Sbjct: 209 KDDLSGMILETFIVGRKFSDEKELNLGACISLERDPTNVKDPNAIK 252

BLAST of MS015447 vs. ExPASy TrEMBL
Match: A0A5D3BMW6 (Fanconi-associated nuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00150 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-50
Identity = 116/166 (69.88%), Postives = 133/166 (80.12%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D CLSRGTKRKLTQSTLLQLNF  RSK + QS VLK EK ESS  P D LM S VH+LP 
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKDQPQSHVLKSEKKESSVGPGDGLMPSTVHKLPK 144

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEI-CSPKNKGITSEIVTD 125
           +AS  E +D+I+CESLVEC  + Q+DCL D  ++ ERTNGA+EI CSPKNK  TS ++  
Sbjct: 145 DASCIE-NDEIICESLVECAMRPQKDCLFDALNHCERTNGASEICCSPKNK--TSGMLVA 204

Query: 126 KDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           +DDLSG+IL+T+IVGRKFSDEKELNLG  ISLERDPTNVKDPNAIK
Sbjct: 205 RDDLSGLILQTFIVGRKFSDEKELNLGERISLERDPTNVKDPNAIK 247

BLAST of MS015447 vs. ExPASy TrEMBL
Match: A0A1S4E2H4 (Fanconi-associated nuclease OS=Cucumis melo OX=3656 GN=LOC103498718 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-50
Identity = 116/166 (69.88%), Postives = 133/166 (80.12%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D CLSRGTKRKLTQSTLLQLNF  RSK + QS VLK EK ESS  P D LM S VH+LP 
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKDQPQSHVLKSEKKESSVGPGDGLMPSTVHKLPK 144

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEI-CSPKNKGITSEIVTD 125
           +AS  E +D+I+CESLVEC  + Q+DCL D  ++ ERTNGA+EI CSPKNK  TS ++  
Sbjct: 145 DASCIE-NDEIICESLVECAMRPQKDCLFDALNHCERTNGASEICCSPKNK--TSGMLVA 204

Query: 126 KDDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           +DDLSG+IL+T+IVGRKFSDEKELNLG  ISLERDPTNVKDPNAIK
Sbjct: 205 RDDLSGLILQTFIVGRKFSDEKELNLGERISLERDPTNVKDPNAIK 247

BLAST of MS015447 vs. TAIR 10
Match: AT1G48360.1 (zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D  LS   KR+LTQ+TLLQ +F    K      V+  +  + S    +    S+V R   
Sbjct: 70  DLSLSTRKKRRLTQTTLLQSSFLSVPKQLEDGLVICTQ--QKSILDSETFEFSLVQR--- 129

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
               +E S+ I C+                  D S         CSP  +     +  D+
Sbjct: 130 ----SEPSESICCK----------------VEDGS---------CSPSREESLKTVTLDE 189

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           D  +G  +ET+IVGRKFSD ++L +G +I L R P NVKD NAIK
Sbjct: 190 D--NGEAIETFIVGRKFSDVQDLEIGGDIFLLRHPENVKDRNAIK 198

BLAST of MS015447 vs. TAIR 10
Match: AT1G48360.2 (zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D  LS   KR+LTQ+TLLQ +F    K      V+  +  + S    +    S+V R   
Sbjct: 70  DLSLSTRKKRRLTQTTLLQSSFLSVPKQLEDGLVICTQ--QKSILDSETFEFSLVQR--- 129

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
               +E S+ I C+                  D S         CSP  +     +  D+
Sbjct: 130 ----SEPSESICCK----------------VEDGS---------CSPSREESLKTVTLDE 189

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           D  +G  +ET+IVGRKFSD ++L +G +I L R P NVKD NAIK
Sbjct: 190 D--NGEAIETFIVGRKFSDVQDLEIGGDIFLLRHPENVKDRNAIK 198

BLAST of MS015447 vs. TAIR 10
Match: AT1G48360.3 (zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 0

Query: 6   DACLSRGTKRKLTQSTLLQLNFSPRSKVKHQSCVLKLEKNESSADPDDDLMESVVHRLPT 65
           D  LS   KR+LTQ+TLLQ +F    K      V+  +  + S    +    S+V R   
Sbjct: 70  DLSLSTRKKRRLTQTTLLQSSFLSVPKQLEDGLVICTQ--QKSILDSETFEFSLVQR--- 129

Query: 66  NASHNESSDKILCESLVECVEQRQRDCLLDTPDNSERTNGATEICSPKNKGITSEIVTDK 125
               +E S+ I C+                  D S         CSP  +     +  D+
Sbjct: 130 ----SEPSESICCK----------------VEDGS---------CSPSREESLKTVTLDE 189

Query: 126 DDLSGVILETYIVGRKFSDEKELNLGANISLERDPTNVKDPNAIK 171
           D  +G  +ET+IVGRKFSD ++L +G +I L R P NVKD NAIK
Sbjct: 190 D--NGEAIETFIVGRKFSDVQDLEIGGDIFLLRHPENVKDRNAIK 198

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155222.19.5e-86100.00fanconi-associated nuclease 1 homolog isoform X1 [Momordica charantia][more]
XP_038889850.12.4e-5774.55fanconi-associated nuclease 1 homolog isoform X2 [Benincasa hispida][more]
XP_038889851.12.4e-5774.55fanconi-associated nuclease 1 homolog isoform X3 [Benincasa hispida][more]
XP_038889849.12.4e-5774.55fanconi-associated nuclease 1 homolog isoform X1 [Benincasa hispida][more]
XP_022949023.15.5e-5775.90fanconi-associated nuclease 1 homolog [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q5SNL71.9e-1232.45Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q5XVJ42.6e-0933.33Fanconi-associated nuclease 1 homolog OS=Arabidopsis thaliana OX=3702 GN=FAN1 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1DNS14.6e-86100.00Fanconi-associated nuclease OS=Momordica charantia OX=3673 GN=LOC111022365 PE=3 ... [more]
A0A6J1GAX82.6e-5775.90Fanconi-associated nuclease OS=Cucurbita moschata OX=3662 GN=LOC111452490 PE=3 S... [more]
A0A6J1KFS71.0e-5676.51Fanconi-associated nuclease OS=Cucurbita maxima OX=3661 GN=LOC111492828 PE=3 SV=... [more]
A0A5D3BMW61.4e-5069.88Fanconi-associated nuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S4E2H41.4e-5069.88Fanconi-associated nuclease OS=Cucumis melo OX=3656 GN=LOC103498718 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G48360.11.8e-1033.33zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in ... [more]
AT1G48360.21.8e-1033.33zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in ... [more]
AT1G48360.31.8e-1033.33zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in ... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2330coord: 123..170
e-value: 4.9E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR15749:SF6FANCONI-ASSOCIATED NUCLEASEcoord: 6..170
IPR033315Fanconi-associated nuclease 1-likePANTHERPTHR15749FANCONI-ASSOCIATED NUCLEASE 1coord: 6..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS015447.1MS015447.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0036297 interstrand cross-link repair
molecular_function GO:0004518 nuclease activity