
MS015376 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGGCGGATTCCGCTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCACGGTTGTTTGTCTCGACGGTAGTGATTCTCAAGCGTGGATGATTTTGGAACCTTTTATTTCATCATGTTCTGAGTATTTATAATTGTCGCTTGAACATGAAATGTCGAAATTGAGTTTCTTTTTGCTCGCGGTTTTCGAAACCGGGTGGTTGGTAATTTTGTGTTTTTCTTTTCTTCTGTTTGGTCTCGAAATCTTAGACGAGGATTCAGACACGTCTCCAGCACCTTTTTCCAAGCGAGCTAAGATTTCAAATCCGGCGGTATAATTCCCTTCTGTTTACATAAGATTGATTTTCGTTGGAACAGTCCAATAAAGCTAGTTTTATATGATTCTTTTATTTCAATGAATATTTAGGACACGAGTTCGGTGAATGGTAACCCAAAGGACAAACAAGTTGTGGAAATTGAAGATGAAGATTGGCTACCTCCTCCTCCGAAGGTATCTGTTGATGCAAAAGATATGTGTGGCGAAGATTCCACATTGAAGGCGTTAAGGTATTCCAACTTAGTGGTATGCATCTATTGCTTGTTCAATCCATTTATATCTCTACATGGAACCTTATTCCTCAGTGCATAAGCTGCTATGGCATGTCTCTTATGCCATTTTGCCTACGCATATCATGTGTAATCTGCACTGATAGGTTAAAGAAGCAAGAGTTGGCCTCAGTTGCACTATCAGCTGAAAACTTGTTGCGAGCCGTGGAGGAGTCTGCAAAAGTGGATGTTGGAAACACGGCCCCGGCTTCCGTGGATCTTGATTTAGATGACCAAACTCCAGTTGCTTCTAAAGAAAGACCCAAGATTGTTATTTCTGTACAAGACAATGGCAAGGAAGAGCCCAAACAGTATCGCCTGTTTATGGTATGTTTATGTGCATGACTGCATGTTATCCACAACTAAGACTTCGCCTTCCTCAAGTGCAACCATCCTGTTCTGTGAATGTATCTTATGATTTACAATCACTGGTTTTGATGTACGTGCACAATAGCCTTTAATTTTCTCAATGATCTTGCATTGGTAGGCACGTTTAGAATCATCTATAGGGAAATGAATGAATTTGGTGAAGTTGAGTTGAAAAAGAAGAGTGGGGAAAGGAAATAGTAGAGACTGTGGTTGATCTCTTAATATACGTATCATGATTTTTTCCTTAGATTAAGTCATACTATCATGATTCATATCATACATTAGCAGTCTTAGGGGCAGCTTAGTTGGCAAGGGTTTGGGGTCTTTTGGTCATCCTAGCTTAGAGGTCTCAGGTTTGAATTTTTTGATGAGCTTAATGCCAAAAAACTCTTGATGTCCCCTTGGGTATAGGGTAGCATAGCTCCGACTCCCAGCTATAAAAAAAATATATATTATACATCAGCAAAGCTTGAAATAATGATAAAATGTAAGACGTAAGTAAGTTATGAAGAACTGACGTAAGTAAGCTATGAAGAACTGGAAATTCATTCTTTCAATTAATTGTTAAATGGCAGACTAAACTTGAAGGCCATTGGTTACTTTCACATTGTCAATGGTGATTAGCCACATGTACCCTTTAATTGATTGTTTTGATTTTCTTGTCTTTCCCTTCCACATTATGATTGCCTTTACTTCTCTACTGTTATGTGGCGATCATTAGATTTGTACCCAAGATGTTATATATTACTTTTGTTACATTACTGTTCCTTGTACAGTTTCTGCAATTTTGAATTTGATTTCGTTTTAAATTATGGTATTTCCTACGATTCATCCACATTTATAATATAATGAAAGTAGTTTAGGTCTCCAATGGTGGTGGTACTTAGGAAGCTAGGTGATTGAAGTACCAATGGTTATGTTGGATCAGTGTCACTCTTCTCTTATCTTAACATTTTTTTTCTTCCATCACTCCCGAACATACTCTAACATGGTTTTAAATCCTAATGTTATAGGATGAGAAGCTGGGGCGGCTTTTCAAATTGTATGCAGAAATACTCAAACTCGACCCTCAGAGTTTGGTTTTCACTTTTGATGGGGATAAAATCAGCCCAGAAGATACCCCAGCTGGCCTTGGCATGGAAGACGACGATATGATCGAAGTGAACGTCAAGCCGAGT CAGGCGGATTCCGCTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCACGGTTGTTTGTCTCGACGACGAGGATTCAGACACGTCTCCAGCACCTTTTTCCAAGCGAGCTAAGATTTCAAATCCGGCGGACACGAGTTCGGTGAATGGTAACCCAAAGGACAAACAAGTTGTGGAAATTGAAGATGAAGATTGGCTACCTCCTCCTCCGAAGGTATCTGTTGATGCAAAAGATATGTGTGGCGAAGATTCCACATTGAAGGCGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCAGTTGCACTATCAGCTGAAAACTTGTTGCGAGCCGTGGAGGAGTCTGCAAAAGTGGATGTTGGAAACACGGCCCCGGCTTCCGTGGATCTTGATTTAGATGACCAAACTCCAGTTGCTTCTAAAGAAAGACCCAAGATTGTTATTTCTGTACAAGACAATGGCAAGGAAGAGCCCAAACAGTATCGCCTGTTTATGGATGAGAAGCTGGGGCGGCTTTTCAAATTGTATGCAGAAATACTCAAACTCGACCCTCAGAGTTTGGTTTTCACTTTTGATGGGGATAAAATCAGCCCAGAAGATACCCCAGCTGGCCTTGGCATGGAAGACGACGATATGATCGAAGTGAACGTCAAGCCGAGT CAGGCGGATTCCGCTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCACGGTTGTTTGTCTCGACGACGAGGATTCAGACACGTCTCCAGCACCTTTTTCCAAGCGAGCTAAGATTTCAAATCCGGCGGACACGAGTTCGGTGAATGGTAACCCAAAGGACAAACAAGTTGTGGAAATTGAAGATGAAGATTGGCTACCTCCTCCTCCGAAGGTATCTGTTGATGCAAAAGATATGTGTGGCGAAGATTCCACATTGAAGGCGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCAGTTGCACTATCAGCTGAAAACTTGTTGCGAGCCGTGGAGGAGTCTGCAAAAGTGGATGTTGGAAACACGGCCCCGGCTTCCGTGGATCTTGATTTAGATGACCAAACTCCAGTTGCTTCTAAAGAAAGACCCAAGATTGTTATTTCTGTACAAGACAATGGCAAGGAAGAGCCCAAACAGTATCGCCTGTTTATGGATGAGAAGCTGGGGCGGCTTTTCAAATTGTATGCAGAAATACTCAAACTCGACCCTCAGAGTTTGGTTTTCACTTTTGATGGGGATAAAATCAGCCCAGAAGATACCCCAGCTGGCCTTGGCATGGAAGACGACGATATGATCGAAGTGAACGTCAAGCCGAGT QADSAEEFEPLFDYSRVQPRTVVCLDDEDSDTSPAPFSKRAKISNPADTSSVNGNPKDKQVVEIEDEDWLPPPPKVSVDAKDMCGEDSTLKALRLKKQELASVALSAENLLRAVEESAKVDVGNTAPASVDLDLDDQTPVASKERPKIVISVQDNGKEEPKQYRLFMDEKLGRLFKLYAEILKLDPQSLVFTFDGDKISPEDTPAGLGMEDDDMIEVNVKPS Homology
BLAST of MS015376 vs. NCBI nr
Match: XP_022150476.1 (uncharacterized protein LOC111018613 [Momordica charantia]) HSP 1 Score: 429.1 bits (1102), Expect = 2.3e-116 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of MS015376 vs. NCBI nr
Match: XP_004135076.1 (uncharacterized protein LOC101214853 [Cucumis sativus]) HSP 1 Score: 323.2 bits (827), Expect = 1.8e-84 Identity = 173/224 (77.23%), Postives = 195/224 (87.05%), Query Frame = 0
BLAST of MS015376 vs. NCBI nr
Match: XP_008446647.1 (PREDICTED: uncharacterized protein LOC103489317 isoform X1 [Cucumis melo] >KAA0034593.1 putative Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK09144.1 putative Ubiquitin-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 319.7 bits (818), Expect = 2.0e-83 Identity = 171/224 (76.34%), Postives = 191/224 (85.27%), Query Frame = 0
BLAST of MS015376 vs. NCBI nr
Match: XP_038891511.1 (uncharacterized protein LOC120080907 [Benincasa hispida]) HSP 1 Score: 318.2 bits (814), Expect = 5.8e-83 Identity = 168/224 (75.00%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of MS015376 vs. NCBI nr
Match: KGN52648.2 (hypothetical protein Csa_008468 [Cucumis sativus]) HSP 1 Score: 317.4 bits (812), Expect = 9.9e-83 Identity = 170/222 (76.58%), Postives = 193/222 (86.94%), Query Frame = 0
BLAST of MS015376 vs. ExPASy Swiss-Prot
Match: Q9GLZ9 (NFATC2-interacting protein OS=Macaca fascicularis OX=9541 GN=NFATC2IP PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05 Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of MS015376 vs. ExPASy Swiss-Prot
Match: Q8NCF5 (NFATC2-interacting protein OS=Homo sapiens OX=9606 GN=NFATC2IP PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05 Identity = 30/88 (34.09%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of MS015376 vs. ExPASy Swiss-Prot
Match: P55853 (Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 5.6e-04 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of MS015376 vs. ExPASy Swiss-Prot
Match: O09130 (NFATC2-interacting protein OS=Mus musculus OX=10090 GN=Nfatc2ip PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 7.3e-04 Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0
BLAST of MS015376 vs. ExPASy TrEMBL
Match: A0A6J1DBL7 (uncharacterized protein LOC111018613 OS=Momordica charantia OX=3673 GN=LOC111018613 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of MS015376 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 8.7e-85 Identity = 173/224 (77.23%), Postives = 195/224 (87.05%), Query Frame = 0
BLAST of MS015376 vs. ExPASy TrEMBL
Match: A0A5A7SVU4 (Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001350 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 9.6e-84 Identity = 171/224 (76.34%), Postives = 191/224 (85.27%), Query Frame = 0
BLAST of MS015376 vs. ExPASy TrEMBL
Match: A0A1S3BF31 (uncharacterized protein LOC103489317 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489317 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 9.6e-84 Identity = 171/224 (76.34%), Postives = 191/224 (85.27%), Query Frame = 0
BLAST of MS015376 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81 Identity = 166/224 (74.11%), Postives = 190/224 (84.82%), Query Frame = 0
BLAST of MS015376 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 172.6 bits (436), Expect = 3.7e-43 Identity = 106/217 (48.85%), Postives = 135/217 (62.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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