MS015373 (gene) Bitter gourd (TR) v1

Overview


Name	MS015373
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Location	scaffold2: 2958772 .. 2959155 (-)
RNA-Seq Expression	MS015373
Synteny	MS015373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGACGGAACCGCCTCCGCCGTCGCCCGCTCAGTCCGTTCCGCCGGCGATCTCGCATCATCTGAATTATCCGGACTCCGTGGACTCCTCTCCGATGTATCACTAACACCGATTCCTGGGACGAACACCTCGCTGCAGCCGCCAACGCTGGCCGGCTCCGTCTAATGTGCAGCTACGGCACGACAAACTCTGTGCTATGTGTGCGGTGAGACTCGGATCGTTGTTGTGGACCACCATACGTCTTTATCTGACCTCACTGCCCGTTTGTCGAAGACGCTTCTCAATGGCCGTCCGTTAATTGGATTCTCTCATTTCCGTTGCCACCGATGAGGATTTGGAGAATATGATTGATGAGTATGATCGGCCAATTCTCAAGCGCTCGAAT

mRNA sequence

TTGACGGAACCGCCTCCGCCGTCGCCCGCTCAGTCCGTTCCGCCGGCGATCTCGCATCATCTGAATTATCCGGACTCCGTGGACTCCTCTCCGATGACTAACACCGATTCCTGGGACGAACACCTCGCTGCAGCCGCCAACGCTGGCCGGCTCCGTCTAATGTGCAGCTACGGCCGACAAACTCTGTGCTATGTGTGCGGTGAGACTCGGATCGTTGTTGTGGACCACCATACGTCTTTATCTGACCTCACTGCCCGTTTGTCGAAGACGCTTCTCAATGGCCGTCCGTTATTGGATTCTCTCATTTCCGTTGCCACCGATGAGGATTTGGAGAATATGATTGATGAGTATGATCGGCCAATTCTCAAGCGCTCGAAT

Coding sequence (CDS)

TTGACGGAACCGCCTCCGCCGTCGCCCGCTCAGTCCGTTCCGCCGGCGATCTCGCATCATCTGAATTATCCGGACTCCGTGGACTCCTCTCCGATGACTAACACCGATTCCTGGGACGAACACCTCGCTGCAGCCGCCAACGCTGGCCGGCTCCGTCTAATGTGCAGCTACGGCCGACAAACTCTGTGCTATGTGTGCGGTGAGACTCGGATCGTTGTTGTGGACCACCATACGTCTTTATCTGACCTCACTGCCCGTTTGTCGAAGACGCTTCTCAATGGCCGTCCGTTATTGGATTCTCTCATTTCCGTTGCCACCGATGAGGATTTGGAGAATATGATTGATGAGTATGATCGGCCAATTCTCAAGCGCTCGAAT

Protein sequence

LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMTNTDSWDEHLAAAANAGRLRLMCSYGRQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPLLDSLISVATDEDLENMIDEYDRPILKRSN

Homology

[Close]

BLAST of MS015373 vs. NCBI nr
Match: XP_008446641.1 (PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa] >TYK09140.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-41
Identity = 98/145 (67.59%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEPPPP P Q++PPA+S HLNYP+S+DSSP + NTD+WDE LA    A RLRLMCSYG 
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYVCGETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. NCBI nr
Match: XP_038892018.1 (putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 6.9e-41
Identity = 98/145 (67.59%), Postives = 106/145 (73.10%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEPPPP P Q +PP +S HLNYP+S+DSSP + NTD+WDE LA    AGRLRLMCSYG 
Sbjct: 1   MTEPPPPPPTQPLPPVVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYVCGETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. NCBI nr
Match: XP_004135079.1 (RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetical protein Csa_009068 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEPPP    Q + PA+S HLNYP+S+DSSP + NTD+WDE LA    A RLRLMCSYG 
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYVCGETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. NCBI nr
Match: XP_022968040.1 (uncharacterized protein LOC111467403 [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 2.1e-37
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEP PP P Q +P A++ HLNYP+SVDSSP + N D+WDE LA AA A RLR MCSYG 
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYV GETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. NCBI nr
Match: XP_023541650.1 (uncharacterized protein LOC111801745 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 2.1e-37
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEP PP P Q +P A++ HLNYP+SVDSSP + N D+WDE LA AA A RLR MCSYG 
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYV GETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. ExPASy TrEMBL
Match: A0A5A7SVC4 (RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001310 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 98/145 (67.59%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEPPPP P Q++PPA+S HLNYP+S+DSSP + NTD+WDE LA    A RLRLMCSYG 
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYVCGETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. ExPASy TrEMBL
Match: A0A1S3BF26 (RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 98/145 (67.59%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEPPPP P Q++PPA+S HLNYP+S+DSSP + NTD+WDE LA    A RLRLMCSYG 
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYVCGETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. ExPASy TrEMBL
Match: A0A0A0KWH3 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.9e-38
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEPPP    Q + PA+S HLNYP+S+DSSP + NTD+WDE LA    A RLRLMCSYG 
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYVCGETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. ExPASy TrEMBL
Match: A0A6J1HW25 (uncharacterized protein LOC111467403 OS=Cucurbita maxima OX=3661 GN=LOC111467403 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.0e-37
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEP PP P Q +P A++ HLNYP+SVDSSP + N D+WDE LA AA A RLR MCSYG 
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYV GETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. ExPASy TrEMBL
Match: A0A6J1FZM0 (negative elongation factor A-like OS=Cucurbita moschata OX=3662 GN=LOC111449378 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.0e-37
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 1   LTEPPPPSPAQSVPPAISHHLNYPDSVDSSPMT-NTDSWDEHLAAAANAGRLRLMCSYG- 60
           +TEP PP P Q +P A++ HLNYP+SVDSSP + N D+WDE LA AA A RLR MCSYG 
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  -------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSL 120
                   +TLCYV GETRIVVVD HTSLSDLTARLSKTLLNGRP           LDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVATDEDLENMIDEYDRPILKRSN 127
           ISV TDEDLENMIDEYDR     SN
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSN 145

[Close]

BLAST of MS015373 vs. TAIR 10
Match: AT2G01190.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 72/162 (44.44%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 3   EPPPPSPAQS-------------VPPAISHHL--NYPDSVDSSPMT-NTDSWDEHLAAAA 62
           EPPP S + +             VPP +  H+  +YP+S+DSSP +  TD WD+  A + 
Sbjct: 2   EPPPSSLSSTAVASTSISAATAPVPPPLPPHVTSSYPESLDSSPRSRTTDGWDDLPAPSG 61

Query: 63  NAG---------RLRLMCSYG--------RQTLCYVCGETRIVVVDHHTSLSDLTARLSK 122
             G         +LR MCSYG         ++LCY+ G+TRIVVVD ++SL  L ARLS 
Sbjct: 62  GGGGGGGSAVSSKLRFMCSYGGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSN 121

[Close]

BLAST of MS015373 vs. TAIR 10
Match: AT3G18230.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17
Identity = 62/137 (45.26%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 4   PPPPSPAQSVPPAISHHLNYPDSVDSSP---MTNTDSWDEHLAAAANAGRLRLMCSYG-- 63
           P P +   S  PA    +     +D SP    T+T    E LAA   A +LRLMCS+G  
Sbjct: 15  PTPAAAVSSAIPAPVKSVAVQQPIDGSPRAVATDTGGIPEPLAAVPGA-KLRLMCSFGGH 74

Query: 64  ------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL----------LDSLI 120
                  ++L Y  GETRIVVVD   SLS L +RLS  LLNGR            LDSL+
Sbjct: 75  IMPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTLKYQLPSEDLDSLV 134

[Close]

BLAST of MS015373 vs. TAIR 10
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 25  DSVDSSPMTNTDSWDEHLAAAANAGRLRLMCSYGRQ--------TLCYVCGETRIVVVDH 84
           DS+ SSP +  DS            R+R MC++G +         LCYV G+ R+V V  
Sbjct: 43  DSLASSPRSEYDS----------QPRVRFMCTFGGRILPRPPDNQLCYVGGDNRMVAVHR 102

Query: 85  HTSLSDLTARLSKTLLNGRPL-----------LDSLISVATDEDLENMIDEYDR 120
           HT+ + L ++L+K  L+G+             LD+LISV+TDED+ENM+DEYDR
Sbjct: 103 HTTFASLLSKLAK--LSGKSNISVKYQLPNEDLDALISVSTDEDVENMMDEYDR 144

[Close]

BLAST of MS015373 vs. TAIR 10
Match: AT1G25300.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 50  RLRLMCSYG--------RQTLCYVCGETRIVVVDHHTSLSDLTARLSKTLLNGRPL---- 109
           +L L+CSYG         ++L Y+ GETR+V+V    S  D    LS  LL+GR      
Sbjct: 10  KLHLLCSYGGRIMPLPPEKSLHYIGGETRLVIVPRGISFLDFFKLLSDKLLSGRSFSLKY 69

Query: 110 ------LDSLISVATDEDLENMIDEYDRPILKR 125
                  DSLI+V+ +EDL+NMI EYD   L+R
Sbjct: 70  KLPSCDFDSLITVSDNEDLQNMIAEYDSTRLRR 102

[Close]

BLAST of MS015373 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 43/125 (34.40%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 22  NYPDSVDSSPMT------NTDSWDEHLAAAANAGRLRLMCSYGRQ--------TLCYVCG 81
           +YPDS +SSP +      N   W++         +++LMCSYG +         L YV G
Sbjct: 8   SYPDSAESSPRSRDVEFENPSPWEDQ---QQQNYKVKLMCSYGGKIQPRPHDNQLTYVNG 67

Query: 82  ETRIVVVDHHTSLSDLTARLSKTLLNG-------------RPLLDSLISVATDEDLENMI 120
           +T+I+ VD       L ++LS     G                LD+LISV  DEDLE+M+
Sbjct: 68  DTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMM 127

The following BLAST results are available for this feature:

BLAST of MS015373 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446641.1	4.1e-41	67.59	PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 R...	[more]
XP_038892018.1	6.9e-41	67.59	putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispi...	[more]
XP_004135079.1	1.2e-37	65.52	RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetica...	[more]
XP_022968040.1	2.1e-37	65.52	uncharacterized protein LOC111467403 [Cucurbita maxima]	[more]
XP_023541650.1	2.1e-37	65.52	uncharacterized protein LOC111801745 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS015373 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVC4	2.0e-41	67.59	RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BF26	2.0e-41	67.59	RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 P...	[more]
A0A0A0KWH3	5.9e-38	65.52	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV...	[more]
A0A6J1HW25	1.0e-37	65.52	uncharacterized protein LOC111467403 OS=Cucurbita maxima OX=3661 GN=LOC111467403...	[more]
A0A6J1FZM0	1.0e-37	65.52	negative elongation factor A-like OS=Cucurbita moschata OX=3662 GN=LOC111449378 ...	[more]

BLAST of MS015373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01190.1	1.5e-22	44.44	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G18230.1	4.4e-17	45.26	Octicosapeptide/Phox/Bem1p family protein	[more]
AT4G05150.1	1.2e-11	39.47	Octicosapeptide/Phox/Bem1p family protein	[more]
AT1G25300.1	2.6e-09	40.86	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G09620.1	1.3e-08	34.40	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 62..119 e-value: 3.6E-5 score: 23.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR31066:SF27	EXPRESSED PROTEIN	coord: 13..120
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 13..120
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 60..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015373.1	MS015373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding