MS015350 (gene) Bitter gourd (TR) v1

Overview


Name	MS015350
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold2: 2766341 .. 2767150 (-)
RNA-Seq Expression	MS015350
Synteny	MS015350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCACTGCGCCATTCTGTCAAACACCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCGGGCCCCATTTCTGACCTCAGAGATCAGATAGTTTGCCCTAAACCTCGACGTTTAAGCAATCTAAAGGTCACCGTCAACGGCCACGCCGATGCCTCACTCCGGTGGAATCTATGGTTAGTCTCCTCTTCCCCCAACCTTCTGAAATCATGATAATAATTAAATAAACTGCTAATTCTTCTTGAACCGAATTTCAGTCACCAAGTTGAGCAAATTGACATGGCAGCGGGACCGGATCTGCTGGACTTCCTCCTCACAAAAGTATGCCTCTTTAATTAGACTTCAATTTCTTTTCTGTTCCAGATCAAAATCAGTGCCATCTTCTTCCCCCTTTCCACGAGAAAAACAAATAATTTAACTAATATTAGAGGAGGCCCTCGTAGGTTCGTTTGTCTACATCAAAGTCATTTCCGTGGACCAAAGTTATTAATCATATCGTTAATCTTACAGGATGGTTGCAGCGTGGACCAATCCTTCACGCAGTTGGCTTCGTCGCCCCCTTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGCCCGATTCGGGGACGAAAAATTCATTCCCTTTGCACCGATTGCAGCTTCACCGTCGGTTCAGTTGTCACCCTCCACAGCCTCCAGGAAAGGAGGCCGTGTGAGGGCGAATTTTGGGAACAAACCAGCGGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCC

mRNA sequence

ATGAATCACTGCGCCATTCTGTCAAACACCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCGGGCCCCATTTCTGACCTCAGAGATCAGATAGTTTGCCCTAAACCTCGACGTTTAAGCAATCTAAAGGTCACCGTCAACGGCCACGCCGATGCCTCACTCCGGTGGAATCTATGTCACCAAGTTGAGCAAATTGACATGGCAGCGGGACCGGATCTGCTGGACTTCCTCCTCACAAAAGATGGTTGCAGCGTGGACCAATCCTTCACGCAGTTGGCTTCGTCGCCCCCTTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGCCCGATTCGGGGACGAAAAATTCATTCCCTTTGCACCGATTGCAGCTTCACCGTCGGTTCAGTTGTCACCCTCCACAGCCTCCAGGAAAGGAGGCCGTGTGAGGGCGAATTTTGGGAACAAACCAGCGGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCC

Coding sequence (CDS)

ATGAATCACTGCGCCATTCTGTCAAACACCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCGGGCCCCATTTCTGACCTCAGAGATCAGATAGTTTGCCCTAAACCTCGACGTTTAAGCAATCTAAAGGTCACCGTCAACGGCCACGCCGATGCCTCACTCCGGTGGAATCTATGTCACCAAGTTGAGCAAATTGACATGGCAGCGGGACCGGATCTGCTGGACTTCCTCCTCACAAAAGATGGTTGCAGCGTGGACCAATCCTTCACGCAGTTGGCTTCGTCGCCCCCTTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGCCCGATTCGGGGACGAAAAATTCATTCCCTTTGCACCGATTGCAGCTTCACCGTCGGTTCAGTTGTCACCCTCCACAGCCTCCAGGAAAGGAGGCCGTGTGAGGGCGAATTTTGGGAACAAACCAGCGGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCC

Protein sequence

MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLCHQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGDEKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA

Homology

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BLAST of MS015350 vs. NCBI nr
Match: XP_022150691.1 (uncharacterized protein LOC111018762 [Momordica charantia])

HSP 1 Score: 374.8 bits (961), Expect = 4.2e-100
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC
Sbjct: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMAAGPDLLDFLLTK+GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180

[Close]

BLAST of MS015350 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPFAPI ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of MS015350 vs. NCBI nr
Match: KAG6601286.1 (hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPFAPI ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of MS015350 vs. NCBI nr
Match: XP_022986983.1 (uncharacterized protein LOC111484540 [Cucurbita maxima])

HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88
Identity = 162/180 (90.00%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNAFSSHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIP API ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPLAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of MS015350 vs. NCBI nr
Match: XP_023517111.1 (uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 161/180 (89.44%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FS HEEMR  VPGP SDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPFSDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDM  GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMGTGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPFAPI ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of MS015350 vs. ExPASy TrEMBL
Match: A0A6J1DC97 (uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018762 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.0e-100
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC
Sbjct: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMAAGPDLLDFLLTK+GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180

[Close]

BLAST of MS015350 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.2e-89
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPFAPI ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of MS015350 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-88
Identity = 162/180 (90.00%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNAFSSHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIP API ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPLAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of MS015350 vs. ExPASy TrEMBL
Match: A0A5D3CB96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001020 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 157/180 (87.22%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FSGHEEMRTSVP PISD RDQ+VCPKPRRL     TVN H+D SLRWNL 
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVE IDMAAGPDLLDFLLTK GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPF PI ASPS QLSPST+SRKGGRVRA+FGNKP VRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 EKFIPFTPI-ASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of MS015350 vs. ExPASy TrEMBL
Match: A0A1S3BG95 (uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 157/180 (87.22%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHCAILSN FSGHEEMRTSVP PISD RDQ+VCPKPRRL     TVN H+D SLRWNL 
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVE IDMAAGPDLLDFLLTK GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180
           EKFIPF PI ASPS QLSPST+SRKGGRVRA+FGNKP VRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 EKFIPFTPI-ASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of MS015350 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 6.8e-40
Identity = 91/187 (48.66%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNH A+  N F+   ++R+S    +   +  +VCPKPRR+       + H   SLR    
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIG--LRNNHHHPSRSLRCYFS 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSP-PFLCGSPPSRVANPLIQDARFG 120
           HQ+E  +  A  D+LD +LTKDG   +Q   Q+  SP PFLCGSPPSRVANPL QDARF 
Sbjct: 61  HQLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFR 120

Query: 121 DE-----KFIPFAPIAASPSVQLSPSTASRKGG-RVRANFGNKPAVRIEGFDCLDRDRQN 180
           DE       IP  P    P      S++ RKGG  VR NFGN P VR+EGFDCLDRD +N
Sbjct: 121 DEIVSVSSVIP--PQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDCLDRDSRN 180

[Close]

BLAST of MS015350 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33
Identity = 87/181 (48.07%), Postives = 101/181 (55.80%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHC++  N F   EE R  VP   S   D +VCPKPRR +N+      H   S   ++C
Sbjct: 1   MNHCSLQQNAFLSREESRGFVP-IYSHPVDSVVCPKPRRANNVIRPFRLHFSLSGADDVC 60

Query: 61  HQVEQIDMAAGPDLLDFLLTKDGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
                 D  AG DLLD    K+  S        + SPPF  GSPPSR ANPL QDARFGD
Sbjct: 61  ------DSKAGEDLLDIFRRKESVS--------SRSPPFFLGSPPSRAANPLAQDARFGD 120

Query: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPA-VRIEGFDCLDRDRQNCSIPAF 180
           EK    +P + SP   L PS +  K G  R  FG KPA VR+EGFDCL+RDR N SIPA 
Sbjct: 121 EKLNTVSP-SLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAM 162

[Close]

BLAST of MS015350 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MN C I  N F   EEMR +    +SD RD ++CPKPRR+  L    N H+  SLRW L 
Sbjct: 2   MNSCGIQQNAF---EEMRRN--AAVSDRRDAVICPKPRRVGAL----NHHSSRSLRWQLN 61

Query: 61  HQVEQIDMAAGPDLLDFLLTK-DGCSVDQSFTQLASSPP-FLCGSPPSRVANPLIQDARF 120
           HQ+E  +  +G ++LDF+LTK  G   +Q  T+   +PP F  GSPPSRV+NPL +D+ F
Sbjct: 62  HQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF 121

Query: 121 GDEKFIPFAPIAASP-SVQLSPSTASRKGGRVRA--NFGNKPAVRIEGFDCLDRDRQNCS 180
            +E  +  +P  ++P + +  P ++ R G  V A  +FGN P VR+ GFDC DR   N S
Sbjct: 122 REELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRS 176

[Close]

BLAST of MS015350 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MN C I  N F   EEMR +    +SD RD ++CPKPRR+  L    N H+  SLRW L 
Sbjct: 2   MNSCGIQQNAF---EEMRRN--AAVSDRRDAVICPKPRRVGAL----NHHSSRSLRWQLN 61

Query: 61  HQVEQIDMAAGPDLLDFLLTK-DGCSVDQSFTQLASSPP-FLCGSPPSRVANPLIQDARF 120
           HQ+E  +  +G ++LDF+LTK  G   +Q  T+   +PP F  GSPPSRV+NPL +D+ F
Sbjct: 62  HQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF 121

Query: 121 GDEKFIPFAPIAASP-SVQLSPSTASRKGGRVRA--NFGNKPAVRIEGFDCLDRDRQNCS 180
            +E  +  +P  ++P + +  P ++ R G  V A  +FGN P VR+ GFDC DR   N S
Sbjct: 122 REELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRS 176

[Close]

BLAST of MS015350 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-31
Identity = 86/193 (44.56%), Postives = 107/193 (55.44%), Query Frame = 0


Query: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60
           MNHC +  N F   EEM         D +D +VCPKPRR+  L      +    LR ++ 
Sbjct: 67  MNHCNLQQNAFMSREEMMG------FDRKDLVVCPKPRRVGLLA----NNVIRPLRLHMS 126

Query: 61  HQVEQI-DMAAGPDLLDFLLTK-DGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF 120
                + D  AG +LL+ +  K D  ++ Q    L+SSPP+  GSPPSR ANPL QDARF
Sbjct: 127 QAAADLCDSKAGAELLEIIRRKEDNGTIGQ---LLSSSPPYFPGSPPSRAANPLAQDARF 186

Query: 121 GDEKFIPFAPIAASPSVQ----------LSPSTASRKGGRVRANFG-NKPAVRIEGFDCL 180
            DEK  P +P   SP +Q           S S++S   G VR  FG N PAVR+EGFDCL
Sbjct: 187 RDEKLNPISP--NSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCL 244

The following BLAST results are available for this feature:

BLAST of MS015350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150691.1	4.2e-100	99.44	uncharacterized protein LOC111018762 [Momordica charantia]	[more]
XP_022957437.1	1.3e-88	90.56	uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothet...	[more]
KAG6601286.1	1.3e-88	90.56	hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022986983.1	8.3e-88	90.00	uncharacterized protein LOC111484540 [Cucurbita maxima]	[more]
XP_023517111.1	1.1e-87	89.44	uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS015350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC97	2.0e-100	99.44	uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1GZ47	6.2e-89	90.56	uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JI50	4.0e-88	90.00	uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540...	[more]
A0A5D3CB96	4.6e-84	87.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BG95	4.6e-84	87.22	uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=...	[more]

BLAST of MS015350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	6.8e-40	48.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	4.7e-33	48.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.1	1.5e-31	43.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	1.5e-31	43.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	2.6e-31	44.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..180
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015350.1	MS015350.1	mRNA