MS015285 (gene) Bitter gourd (TR) v1

Overview
NameMS015285
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1262)
Locationscaffold2: 2286778 .. 2287125 (+)
RNA-Seq ExpressionMS015285
SyntenyMS015285
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGTAACGAGGCCTCTTTCTATGTACAGAAATTACTACCCTCCTTCGGCGGCGCCGGCGCCGGAGCCGGAGGGCCCAAACACAGGGGTTCTGGTGATGGACGAAGATGAAATGGTGGATTTCAGATGCTGTTTTGGATTGGTTAACACAAAGTATGTGAAGAGGGCGGTGGAGGCGCCGCCGTTCCCTCAGAACAAGATGCTGCAGCTTTCCTATTCGTATTCCACAAATGGAGGCAAGGACAATCACACAGATTACTTACGCGCAATGCTGATTCCCGTTCTCAATCAGCCTTTGTCTTCCAACCAATATTATGTCATCCAATCCACTGGCAAAGCAAAAGGG

mRNA sequence

ATGTACGTAACGAGGCCTCTTTCTATGTACAGAAATTACTACCCTCCTTCGGCGGCGCCGGCGCCGGAGCCGGAGGGCCCAAACACAGGGGTTCTGGTGATGGACGAAGATGAAATGGTGGATTTCAGATGCTGTTTTGGATTGGTTAACACAAAGTATGTGAAGAGGGCGGTGGAGGCGCCGCCGTTCCCTCAGAACAAGATGCTGCAGCTTTCCTATTCGTATTCCACAAATGGAGGCAAGGACAATCACACAGATTACTTACGCGCAATGCTGATTCCCGTTCTCAATCAGCCTTTGTCTTCCAACCAATATTATGTCATCCAATCCACTGGCAAAGCAAAAGGG

Coding sequence (CDS)

ATGTACGTAACGAGGCCTCTTTCTATGTACAGAAATTACTACCCTCCTTCGGCGGCGCCGGCGCCGGAGCCGGAGGGCCCAAACACAGGGGTTCTGGTGATGGACGAAGATGAAATGGTGGATTTCAGATGCTGTTTTGGATTGGTTAACACAAAGTATGTGAAGAGGGCGGTGGAGGCGCCGCCGTTCCCTCAGAACAAGATGCTGCAGCTTTCCTATTCGTATTCCACAAATGGAGGCAAGGACAATCACACAGATTACTTACGCGCAATGCTGATTCCCGTTCTCAATCAGCCTTTGTCTTCCAACCAATATTATGTCATCCAATCCACTGGCAAAGCAAAAGGG

Protein sequence

MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG
Homology
BLAST of MS015285 vs. NCBI nr
Match: XP_022149024.1 (uncharacterized protein LOC111017544 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 1.1e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA
Sbjct: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
           PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG
Sbjct: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 116

BLAST of MS015285 vs. NCBI nr
Match: XP_022149086.1 (uncharacterized protein LOC111017584 [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 3.1e-27
Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEP--EGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAV 60
           MYVTRPLSMYRN    SAAP P    EGPNTGVLV+ EDE  + R  FGL+  K VK   
Sbjct: 1   MYVTRPLSMYRNEGATSAAPVPAALVEGPNTGVLVI-EDEAAESRWLFGLLKRKSVK--- 60

Query: 61  EAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            APPFPQNK+++L   Y+ N G+  HTDY  A+LIPV+N+PLSSN+YYVI+S GK KG
Sbjct: 61  -APPFPQNKIMEL--RYTINSGEHQHTDYFYALLIPVINRPLSSNKYYVIKSRGKTKG 111

BLAST of MS015285 vs. NCBI nr
Match: XP_023542039.1 (uncharacterized protein LOC111802013 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.5 bits (293), Expect = 7.8e-23
Identity = 66/116 (56.90%), Postives = 83/116 (71.55%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLS YRN  P +AA   EPEGPNTGVLV+ EDE  + +  FGL+     +R+V+A
Sbjct: 1   MYVTRPLSAYRN-SPAAAACEVEPEGPNTGVLVI-EDEASESKWLFGLLK----RRSVKA 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQN +++L   Y+ N G+    D L A+LIPVLNQP SSNQYYVI+S G++KG
Sbjct: 61  LPFPQNMIMEL--RYTRNEGEHQRIDRLNALLIPVLNQPSSSNQYYVIRSRGRSKG 108

BLAST of MS015285 vs. NCBI nr
Match: KAG6574031.1 (hypothetical protein SDJN03_27918, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-22
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLS YRN  P +AA   EPEGPNTG+LV+ EDE  + +  FGL+     +R+V+A
Sbjct: 1   MYVTRPLSAYRN-SPAAAACEVEPEGPNTGILVI-EDEASESKWLFGLLK----RRSVKA 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQN +++L   Y+ N G+    D L A+LIPVLNQP SSNQYYVI+S G++KG
Sbjct: 61  LPFPQNMIMEL--RYTRNEGEHQRIDRLNALLIPVLNQPSSSNQYYVIRSRGRSKG 108

BLAST of MS015285 vs. NCBI nr
Match: XP_038893050.1 (uncharacterized protein LOC120081938 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-22
Identity = 65/120 (54.17%), Postives = 78/120 (65.00%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLS+YR+    S++ A EPEGPNTGVLV+ EDE  + R  FGL+       +V  
Sbjct: 1   MYVTRPLSLYRDTSSSSSSSALEPEGPNTGVLVI-EDEASELRWFFGLLK----DTSVAV 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNH----TDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
           PPFPQNK+L+L Y   +      H    TDY  A LIPVLNQP +SNQYY+I S GK KG
Sbjct: 61  PPFPQNKLLELRYLKHSAAHNRRHWHHLTDYFYAWLIPVLNQPPNSNQYYIINSRGKTKG 115

BLAST of MS015285 vs. ExPASy TrEMBL
Match: A0A6J1D5S8 (uncharacterized protein LOC111017544 OS=Momordica charantia OX=3673 GN=LOC111017544 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.4e-62
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA
Sbjct: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
           PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG
Sbjct: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 116

BLAST of MS015285 vs. ExPASy TrEMBL
Match: A0A6J1D7B1 (uncharacterized protein LOC111017584 OS=Momordica charantia OX=3673 GN=LOC111017584 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27
Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEP--EGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAV 60
           MYVTRPLSMYRN    SAAP P    EGPNTGVLV+ EDE  + R  FGL+  K VK   
Sbjct: 1   MYVTRPLSMYRNEGATSAAPVPAALVEGPNTGVLVI-EDEAAESRWLFGLLKRKSVK--- 60

Query: 61  EAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            APPFPQNK+++L   Y+ N G+  HTDY  A+LIPV+N+PLSSN+YYVI+S GK KG
Sbjct: 61  -APPFPQNKIMEL--RYTINSGEHQHTDYFYALLIPVINRPLSSNKYYVIKSRGKTKG 111

BLAST of MS015285 vs. ExPASy TrEMBL
Match: A0A6J1HWZ9 (uncharacterized protein LOC111467621 OS=Cucurbita maxima OX=3661 GN=LOC111467621 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.5e-23
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLS YRN   P+AA   EPEGPNTGVLV+ +DE  + +  FGL+     +R+V+ 
Sbjct: 1   MYVTRPLSAYRN--SPAAACDVEPEGPNTGVLVI-KDEASESKWLFGLLK----RRSVKV 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQN +++L   Y+ N G+    D L A+LIPVLNQPLSSNQYYVI+S G++KG
Sbjct: 61  LPFPQNMIMEL--RYTRNEGEHQRIDRLNALLIPVLNQPLSSNQYYVIRSRGRSKG 107

BLAST of MS015285 vs. ExPASy TrEMBL
Match: A0A2P5B6V0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_266080 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.4e-23
Identity = 66/118 (55.93%), Postives = 79/118 (66.95%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLSMY+ Y  PSA   P PEGPN+G+LV+ +DE  + R  FGL     +K     
Sbjct: 1   MYVTRPLSMYKKY--PSALSLPPPEGPNSGILVI-QDEAAEPRHFFGLFKGHQLKDL--- 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLR--AMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQNK L+L YSYST  G+++H    R  A  IPVLNQPLSSN+YYVI+S G  KG
Sbjct: 61  -PFPQNKDLKLRYSYSTGAGENSHQHVSRFYANFIPVLNQPLSSNRYYVIRSDGSHKG 111

BLAST of MS015285 vs. ExPASy TrEMBL
Match: W9QWK1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026552 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22
Identity = 65/118 (55.08%), Postives = 78/118 (66.10%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTRPLSMY+ Y  PSA   P PEGPNTG+LV+ +DE  + R  FGL     +K     
Sbjct: 1   MYVTRPLSMYKKY--PSALSLPPPEGPNTGILVI-QDEAAEPRHFFGLFKGHELKHL--- 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDN--HTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQNK L+L YSYST  G+++  H  +  A  IPVLNQPLSSN+YY+IQ  G  KG
Sbjct: 61  -PFPQNKDLKLRYSYSTGTGQNSTQHVSHFYAAFIPVLNQPLSSNRYYLIQPHGSHKG 111

BLAST of MS015285 vs. TAIR 10
Match: AT1G13480.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTR LS Y+    PS      PEGPN+G++V+ +DE     CCFG       +  ++ 
Sbjct: 1   MYVTRRLSEYQK--KPSELKLLPPEGPNSGIMVI-QDEESQATCCFG----SCYEGRLKG 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQN  ++L+ +Y++ GG+   T     + IPVL+QPLSSN YYV+Q  GK  G
Sbjct: 61  LPFPQN--VKLNAAYTSGGGEHQTTHLTPVVFIPVLDQPLSSNLYYVLQRRGKHTG 107

BLAST of MS015285 vs. TAIR 10
Match: AT1G13550.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-17
Identity = 50/112 (44.64%), Postives = 65/112 (58.04%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTR LS YR    PS    P PEGPN+GVLV+ ++E +   CCFGL N  +++     
Sbjct: 1   MYVTRRLSEYRK--NPSELKKPPPEGPNSGVLVIQDEESLT-TCCFGLCNEIFLR----G 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTG 113
            PFPQN  L +      +GG++N       + IPVL QPLSSN+YY  +  G
Sbjct: 61  LPFPQNAALTVR---RDDGGQNNTVHRDPVVFIPVLGQPLSSNRYYTYERCG 102

BLAST of MS015285 vs. TAIR 10
Match: AT1G61600.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-15
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVM-DEDEMVDFRCCFGLVNTKYVKRAVE 60
           MYVTR LS +R Y          PEGP +GVLV+ DE+   +   CFG+      +  +E
Sbjct: 1   MYVTRTLSQFRKY--QKTLSEESPEGPFSGVLVITDEEAETEDTFCFGMC----TRTKIE 60

Query: 61  APPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
             P PQ+K+L + +  S+    +  T   + + IP L+QPLSSN+YYV+ + G+ KG
Sbjct: 61  KLPLPQDKILSVVHLDSSG---NRETSVKKVLFIPALDQPLSSNRYYVVHARGRHKG 108

BLAST of MS015285 vs. TAIR 10
Match: AT1G13520.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-15
Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTR LS Y+     S      PEGPN+GVLV+ ++E     CCFG          ++ 
Sbjct: 1   MYVTRHLSEYQR--NSSDLTRSLPEGPNSGVLVIQDEESKP-TCCFG----NCYDGELKG 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            PFPQN   +L+ +Y T  G D  + + + + IPVL+QP  SN+YYVI+  GK  G
Sbjct: 61  LPFPQN--AKLTVTYRTGTGNDRRSYHDQVLFIPVLDQPYYSNRYYVIKRRGKQSG 107

BLAST of MS015285 vs. TAIR 10
Match: AT1G13510.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 77.4 bits (189), Expect = 8.4e-15
Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 0

Query: 1   MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEA 60
           MYVTR LS Y+    P+    P PEGPN+G+LV+ +       CCFGL     V   +  
Sbjct: 1   MYVTRCLSEYQR--NPAELRQPPPEGPNSGILVIQDQHSQTRPCCFGL--CLVVDSYLSG 60

Query: 61  PPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQSTGKAKG 117
            P PQN  L   +    N G+D+ T     + IPVLN+PLSSN YY I+  GK  G
Sbjct: 61  LPLPQNLKLAARF----NAGEDDAT-CDPVVFIPVLNKPLSSNCYYAIKRVGKHSG 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149024.11.1e-61100.00uncharacterized protein LOC111017544 [Momordica charantia][more]
XP_022149086.13.1e-2761.02uncharacterized protein LOC111017584 [Momordica charantia][more]
XP_023542039.17.8e-2356.90uncharacterized protein LOC111802013 [Cucurbita pepo subsp. pepo][more]
KAG6574031.11.0e-2256.03hypothetical protein SDJN03_27918, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038893050.11.0e-2254.17uncharacterized protein LOC120081938 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D5S85.4e-62100.00uncharacterized protein LOC111017544 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1D7B11.5e-2761.02uncharacterized protein LOC111017584 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1HWZ96.5e-2356.03uncharacterized protein LOC111467621 OS=Cucurbita maxima OX=3661 GN=LOC111467621... [more]
A0A2P5B6V08.4e-2355.93Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_266080 PE... [more]
W9QWK11.1e-2255.08Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026552 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G13480.12.4e-1743.10Protein of unknown function (DUF1262) [more]
AT1G13550.14.0e-1744.64Protein of unknown function (DUF1262) [more]
AT1G61600.14.9e-1538.46Protein of unknown function (DUF1262) [more]
AT1G13520.14.9e-1541.38Protein of unknown function (DUF1262) [more]
AT1G13510.18.4e-1542.24Protein of unknown function (DUF1262) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010683Protein of unknown function DUF1262PFAMPF06880DUF1262coord: 25..116
e-value: 1.4E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR31050:SF3OS08G0413200 PROTEINcoord: 1..116
NoneNo IPR availablePANTHERPTHR31050OS08G0413200 PROTEINcoord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS015285.1MS015285.1mRNA