MS014942 (gene) Bitter gourd (TR) v1

Overview


Name	MS014942
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Fibrous sheath-interacting protein
Location	scaffold2: 129904 .. 135023 (-)
RNA-Seq Expression	MS014942
Synteny	MS014942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCAAGCAGGACTGTGTTGCGTTCTGCATCAATATTCTTAATGGAGCCATATAGACCCGTTCACTTCAGCCGTGCTTCCTCCTCCATCGCACTCGGAACTAGCCGATCCTTCACTCACAGATTGAATTGCAATGTAACAACTGCTAGGGCTCGAGGATTTCACTTCCGCAAACGAACTGTTCTGAATTGCTCCCACGACGAGACCCAATCAACGTCGTCGTCTAATCAGGATGGCCAGGGCCCTCCGCAGGAAGCTGTTTTGAAGGCAATCTCAGGTTTCTACCTGACCCTTATGTTATCAAGGCTTCGGAATTGTAAGCCATTAATCAATTAATTTCATTCATTACCTCTTCATACGGACAAGCTTGTATAATTCTTTCTGTGAGTTGTGCTTGTCTGGCGTTTCTATTTTACGATGGCTTGTTAATCTCTTCGACATAATTGATTGTGAGTTTCATTTGGTTGCTCCACACAGAGGTATCAAAGACAGAAGGGAGGGTTGGGCATACAACAAATATGGTAATTGGGGGAACAGTGACAGATGATTCTACCAATGAGTGGATTGCTTTGGATCAAAAGGTACGGAATAGCTGCTCCATTAGCTCCAATTTATGTATGGAATGGCTGGTTCATATATTTTCATGGTTGGGTTTGTATTTAAGTTAGTTATTAGTATCAATTGGTTTCCTCTCTCTAGCTTTGATGCTCTTAGAAATAAGTTCAAGAGTCAAGGAGGATTTACCAGCAATAATCACATCATCGACACTAGCCACTAGCTAAATAGTATCACCAGCACCTTTAATTTTGCATAATTATTGGACAGGTTAACTCGTACCCGGGTGTTAGAGGCTTTACAGCAATTGGAACTGGGGGAGATGATTTTGTGCAATCTATGGTTGTGGCTGTGGAGTCTGTCCTCCAACAGCCAATTCCTGAGGTGACTCTTTTCTGTTCTAAGGACAACTAAAATCACAGTCTATAAGTCACTTTATTCCACAGATGTCTCGTCAGTGCTGATTAGAACTTTAAATATGATGCCGTATATGTGTGGGGTTCTAAGAAATTGAAATTCATTCCTGCAGTTAGCATGAAATTAGGCCAGATAATATTATTTCCTTTGTGGTTTTATTAAGCGGGAAACATAGTCGTTCTGACCAATTTCTGTTATAAAAAATTATATAGAATGAGTTGACAATGTAAATTGGAAGATGTAACGTAAATCTAACAACAACTTTAATGTGTGTTATTGTTGTCGTTTTCGTTATTTTTTTTAATAGTTTTATTTTTTCAATTTAAAACTATATATTAGTGGGTATAACTGCATATTTGGTCTGTCTGCATTTTCAGAATGTAGTATTTTATAATTGATTGTGCACACTTGTGTCTAGGTATTAAAATAGATCGAGATTATCTTACAAAAATTTCTGTCAAAGTTATACTCTAGCAATTGTACACACATAAAAATGCTAGAAGTATCATTTGGAACCCTTTTTAAGCTTCATGGATTTGCAAAATCTGTCACTATTGTGAAATTTTCTTTTATGTGGACCGTGATGATCACTGCATTAAACTCATAAAAGATAAGGTGGATGCTCATTATTTGCAATGCTTAAAAAAATTGCCAAAATTTTTAATTCTCTAAGCTTTGTGTGTTGCATGGTATGGAGGAGGCAGTTGGTATTTATAATGAATAACATGGGCATAGAAAAGCAAATGTATCTTTGAAGTCTGGACGAGAAGATATCTTTTGGAGACAGATGAAAAAGTGACTTAAAAGAGGGATGAAAATTCTGTCTTTACCATTTTTAGGTTTATGGATGGAAGAAGAGGATTCTAGTTTCATAGGTGCTCTCTTTTGAAGGTGCGAGTTTGATTAATGGCTTAGAGGTTGAAAGAGAGTTCATAAGGCTTTTGTCGTAAGCCTTTCATGTGTTGATTTCTCCGTAGAGTCATTTAGGATTTCATTTAGGTAGATGTCAAAATGGAGTTGGAAGTTCCTTTCCAGATAGGAAGAGCATTCAATCAAAATTTTGGAACGTCATCAAGGTTGATGTAATAAGGTGGTCTAGTAAATAGTAGTGTAAACACAACCCACATCTGTGGACTCTAGTAGAAATCTAACACTGTTAACAGTCGTAGATTTTTACCTATTACCCTCTGTACCTCTCTTTATAAAATATTAGCTAAAGTTCAACTGTTCAACCAGATAGACTCAAATCAGTCCTTCTTGCTGTTGTCTTTCCGTTTCAATCAGTCCTTATAGGGAGAAGAAAAATTGTTGTTTCCATTTCGATGGTTAATGATCTAGTAGATATCTTCTTATTCACAATCTTATGGATCAAATGAAATTACATAAAATAGATGAAATCCAAGCCCCATGCCAAGGGAGATCAGAAAATTTCTGTAAAAAGAGTATTACTATTTTGTTGAAAGGATTAACAAATTTACACCAAGAAAGCACTTGTGACTTTAATTTACGAGAGCTTTTTTTGGCTCCTATGGCTGGAAAGGAACAATAAAATTTTCACCCAAGGAAGGAAAATCAGCTCTATGGACCATTATATTTTTATAGCTCTTTGGTAAAATTTTATGCTCCCTTGAACATACACCATCTTACTTCTCTTTTTGCCCATTGGAAGAGTTTTTTTTTTTTTCCTTGTTCCTTGGCTTGGAGCTTGGCTTTCCTCATCATATTATCTATGGAATCATTTCTTACACACACACACACACAAGAAGTTTACACCAAGAAAGGGCCTCAAAAGAGAGGAAGTCTGAGAAGATTGAAGGTTTTTTCTTGTCGTTGAAATCCTATTGTTCTTCTGAAGCCAAAGATTCCAAAAGAATGCTTTAGCATATTGTAGCTAAAGTATCTCTTTTTCTTTCTTGAAGGGATGGCTTGCTCGCCAATATTATAGCTAGGAAATGGAAATTGTTGGTATCCATGGTAAGAGCCACATCCCAATTGAAGGAGGGGAGTATATAAGTCCGAACATTTCCTGCATATGAGGTAGTAGGTAATTTAAGTTGGTGTTCTTAATAGTTTTTCGTTAGGAGATCTAATTAGATCAATAATTTACAATATGATGGTGGTGCATATTTTCTCTACTAAAGATCATGGTTAAATCTTCGGTTCATTCAAGGTATCAAATTCTTTGAACATCTGTTAGGTCTTACAATCAATTTAGCCAGATTGGTTGTTGTGGGTGGGTGTGAATTGCTCTTCTATGTAGCTAAGTTCCCTGGTCACTGGGTCTAAAGTGCAAGCACATACCAATTGCATTCCAGATGCAAAGATCAAACCATTTCTGAGTGCGGGAATGACATTCTGGAGATTGGATTTTGAGTTTGAAAGGAAGAGCCTAACCAATTTAGAGGTGTGGTAATGGATTTCTTTGTGTTGGAAGGTGTTTCTTTGGATTCTGACTAGGAAAAGGGAGAATTCCAGGATATTTTCCTCTCAATCTCTGTTTCGTGATATTGTTCCAATGGAGGAGGCCGTTCATCACGATACTTAAACTACTATTGGGAAAACCGACTTATCCAAGAAAGTAAAAATATAAACTCTATTCTTTCATGGGATAAATACACATGATAAATCCATGTGTGAAACCCATAATTTTACTAGCATCATGATGGTGTGCTTCTTGTAGGAAAGATGATGAAATTTTTTGACGACCCTTTCATTCGGTGCCCTTTCTTGGAGATAATTTGGCAATANAATTTGGAAAAAAAAAAAAAAAAAACAAGAAAACAAAATTGTGGAGGCTGTTTAATGTGTGTGTGGCTGACTTCTTTTCTCTATGACTGTGTGCCTATCCTTTTAAAGATAAGGTTGAAGTAGTACTGCGTAATCCTTTTAGAGCTTTCTTTTGTAAAATTTGGCAAGAAAGAGAATCGGAGAATCTTTCAAGTGAATGATAGAAGTAATTGAAGAGTTTTAGGATACTTTGCTTCTTGTTTCTTCTTCATCAAGCTCTTTACACTCCTTTTTGTAACTATTCTTTTTGTACGACTTTCAGGATATTTTTTTTGTTGCTTTATTTACCTTTATGAGGGTTCCCCCCCCACCCAAAACACACAACAACAGAGAGAGAAACCCATTACTACCATTTGGTTGCAAACATCAGTAAAGGTTTTCACCGATTCCTTTCTATTTAAAATATATTAAATGGTTTAGACTTTTCTAAGTCTAGCAGATTGTGCTTTTGGACGATTTAACAAAACCTTGATGAATGCACCATTATGGTTTTTCATTGAAGAATTCTGCTGTTAGGATGGAAGCATTGTGTCTGTATATTCTAAACAGTTCATTAAGAAAAAGAGAGTGAGAAGAAGAAAGATAAGAAAGAAAGAGCATACATAATTCTAAAGCGAGTGGACTTTCAAGGTGTTAATGTTAAATCAGGCTATAAAAATACGTGTTCGATTCAAATCCTGGAAAAGTGAAAATCTCCTTTAAGGGAATGAGGTAGATCCCGATGAATAATGATGGTTAGTGTTAGATGATTGCTAAAAGTTAACCGTGTTGCCACTTAAGAAAGTGGACCTCCCCTGTTTCGTTTGTCCTTGATAACATTGAAGTTCTGTTTAGTCCCCACCACCTTTAGCCCGCTGGTTAATTAATAACCATTGAGGTTTAGCTTAACCAATTTGGTTGCACCATTAGTCTATTTTGTTATTTTTAATTATTCTGTTTTCAGTAGTTTCTGTATATTGCTTATGTATAGGTATCAGAAATTGGTTCTTTCACGAATGAAGTAATATACAGAGCAAATTTCTATTTCTGATGTATTATTAGTTGTGGTTATGGACACAAATTTTGAATCATAGATAAATGGAGGGCTCTTGCTCTGTACACATTAGGATGATAGTTTACAAATTTGTTCCTGCTTTTGATTGGGTGGTAAAGAAATTTGTTTGTATACTCTGTACAGGGCAAGGTGAGGCATAAATTATCATCAAAAGGGAAGTACGTGTCAGTAAACATCGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTCCCTCTCTTTCTCTCCCATTAATTTGTTCATTTATGATGCCTTGCAATTTGTTAGCATACCATGTCCTCCACCCGCCAACAAACATATTCAGTTA

mRNA sequence

ATGGCAGCAAGCAGGACTGTGTTGCGTTCTGCATCAATATTCTTAATGGAGCCATATAGACCCGTTCACTTCAGCCGTGCTTCCTCCTCCATCGCACTCGGAACTAGCCGATCCTTCACTCACAGATTGAATTGCAATGTAACAACTGCTAGGGCTCGAGGATTTCACTTCCGCAAACGAACTGTTCTGAATTGCTCCCACGACGAGACCCAATCAACGTCGTCGTCTAATCAGGATGGCCAGGGCCCTCCGCAGGAAGCTGTTTTGAAGGCAATCTCAGAGGTATCAAAGACAGAAGGGAGGGTTGGGCATACAACAAATATGGTAATTGGGGGAACAGTGACAGATGATTCTACCAATGAGTGGATTGCTTTGGATCAAAAGGTTAACTCGTACCCGGGTGTTAGAGGCTTTACAGCAATTGGAACTGGGGGAGATGATTTTGTGCAATCTATGGTTGTGGCTGTGGAGTCTGTCCTCCAACAGCCAATTCCTGAGGGCAAGGTGAGGCATAAATTATCATCAAAAGGGAAGTACGTGTCAGTAAACATCGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTCCCTTTCTCTCCCATTAATTTGTTCATTTATGATGCCTTGCAATTTGTTAGCATACCATGTCCTCCACCCGCCAACAAACATATTCAGTTA

Coding sequence (CDS)

ATGGCAGCAAGCAGGACTGTGTTGCGTTCTGCATCAATATTCTTAATGGAGCCATATAGACCCGTTCACTTCAGCCGTGCTTCCTCCTCCATCGCACTCGGAACTAGCCGATCCTTCACTCACAGATTGAATTGCAATGTAACAACTGCTAGGGCTCGAGGATTTCACTTCCGCAAACGAACTGTTCTGAATTGCTCCCACGACGAGACCCAATCAACGTCGTCGTCTAATCAGGATGGCCAGGGCCCTCCGCAGGAAGCTGTTTTGAAGGCAATCTCAGAGGTATCAAAGACAGAAGGGAGGGTTGGGCATACAACAAATATGGTAATTGGGGGAACAGTGACAGATGATTCTACCAATGAGTGGATTGCTTTGGATCAAAAGGTTAACTCGTACCCGGGTGTTAGAGGCTTTACAGCAATTGGAACTGGGGGAGATGATTTTGTGCAATCTATGGTTGTGGCTGTGGAGTCTGTCCTCCAACAGCCAATTCCTGAGGGCAAGGTGAGGCATAAATTATCATCAAAAGGGAAGTACGTGTCAGTAAACATCGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTCCCTTTCTCTCCCATTAATTTGTTCATTTATGATGCCTTGCAATTTGTTAGCATACCATGTCCTCCACCCGCCAACAAACATATTCAGTTA

Protein sequence

MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKRTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYVSVNIGPVQVISSEQVPFSPINLFIYDALQFVSIPCPPPANKHIQL

Homology

[Close]

BLAST of MS014942 vs. NCBI nr
Match: XP_022151740.1 (uncharacterized protein LOC111019651 isoform X1 [Momordica charantia])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60
           MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR
Sbjct: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60

Query: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN
Sbjct: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120

Query: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180
           EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180

Query: 181 SVNIGPVQVISSEQV 196
           SVNIGPVQVISSEQV
Sbjct: 181 SVNIGPVQVISSEQV 195

[Close]

BLAST of MS014942 vs. NCBI nr
Match: XP_023542309.1 (uncharacterized protein LOC111802242 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90
Identity = 176/195 (90.26%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60
           MAASR VLRSASIFL EP RP HFSRASSS +LGT RSFTHRLNCNV ++R RGFHF +R
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSFSLGTRRSFTHRLNCNVWSSRVRGFHFPER 60

Query: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVLNCS DETQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDSTN
Sbjct: 61  TVLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSTN 120

Query: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180
           EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPEGKVRHKLS+KGKYV
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKYV 180

Query: 181 SVNIGPVQVISSEQV 196
           SVNIGPVQVISSEQV
Sbjct: 181 SVNIGPVQVISSEQV 195

[Close]

BLAST of MS014942 vs. NCBI nr
Match: XP_022945039.1 (uncharacterized protein LOC111449401 [Cucurbita moschata])

HSP 1 Score: 334.7 bits (857), Expect = 6.1e-88
Identity = 175/196 (89.29%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRA-SSSIALGTSRSFTHRLNCNVTTARARGFHFRK 60
           MAASR VLRSASIFL EP RP HFSRA SSS  LGT RSFTHRLNCNV ++RARGFHF +
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFTHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RT LNCS DETQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTGLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKY 180
           NEWIALDQKVNSYPGVRGFTAIGTGG DFVQSMVVAVESV+QQPIPEGKVRHKLS+KGKY
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGHDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 VSVNIGPVQVISSEQV 196
           VSVNIGPVQVISSEQV
Sbjct: 181 VSVNIGPVQVISSEQV 196

[Close]

BLAST of MS014942 vs. NCBI nr
Match: XP_022966813.1 (uncharacterized protein LOC111466408 [Cucurbita maxima])

HSP 1 Score: 334.3 bits (856), Expect = 7.9e-88
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRA-SSSIALGTSRSFTHRLNCNVTTARARGFHFRK 60
           MAASR VLRSASIFL EP RP HFSRA SSS  LGT RSF HRLNCNV ++RARGFHF +
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFPHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RTVLNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTVLNCSLDKTQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKY 180
           NEWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPEGKVRHKLS+KGKY
Sbjct: 121 NEWIILDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 VSVNIGPVQVISSEQV 196
           VSVNIGPVQVISSEQV
Sbjct: 181 VSVNIGPVQVISSEQV 196

[Close]

BLAST of MS014942 vs. NCBI nr
Match: XP_022998631.1 (uncharacterized protein LOC111493214 [Cucurbita maxima])

HSP 1 Score: 324.7 bits (831), Expect = 6.3e-85
Identity = 170/195 (87.18%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60
           MAASRTVLRSA+IFL EP RPV   RASSS +LGT R+FTHRL C     RARGF F KR
Sbjct: 1   MAASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKR 60

Query: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVL CS+DETQSTSSSNQD QGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDS+N
Sbjct: 61  TVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSN 120

Query: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180
           EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQ+PIPEGKVRHKLS+KGKYV
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYV 180

Query: 181 SVNIGPVQVISSEQV 196
           SVNIGPVQVISSEQV
Sbjct: 181 SVNIGPVQVISSEQV 195

[Close]

BLAST of MS014942 vs. ExPASy TrEMBL
Match: A0A6J1DC16 (uncharacterized protein LOC111019651 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019651 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60
           MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR
Sbjct: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60

Query: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN
Sbjct: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120

Query: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180
           EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180

Query: 181 SVNIGPVQVISSEQV 196
           SVNIGPVQVISSEQV
Sbjct: 181 SVNIGPVQVISSEQV 195

[Close]

BLAST of MS014942 vs. ExPASy TrEMBL
Match: A0A6J1FZV2 (uncharacterized protein LOC111449401 OS=Cucurbita moschata OX=3662 GN=LOC111449401 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.9e-88
Identity = 175/196 (89.29%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRA-SSSIALGTSRSFTHRLNCNVTTARARGFHFRK 60
           MAASR VLRSASIFL EP RP HFSRA SSS  LGT RSFTHRLNCNV ++RARGFHF +
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFTHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RT LNCS DETQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTGLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKY 180
           NEWIALDQKVNSYPGVRGFTAIGTGG DFVQSMVVAVESV+QQPIPEGKVRHKLS+KGKY
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGHDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 VSVNIGPVQVISSEQV 196
           VSVNIGPVQVISSEQV
Sbjct: 181 VSVNIGPVQVISSEQV 196

[Close]

BLAST of MS014942 vs. ExPASy TrEMBL
Match: A0A6J1HTC4 (uncharacterized protein LOC111466408 OS=Cucurbita maxima OX=3661 GN=LOC111466408 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.8e-88
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRA-SSSIALGTSRSFTHRLNCNVTTARARGFHFRK 60
           MAASR VLRSASIFL EP RP HFSRA SSS  LGT RSF HRLNCNV ++RARGFHF +
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFPHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RTVLNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTVLNCSLDKTQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKY 180
           NEWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPEGKVRHKLS+KGKY
Sbjct: 121 NEWIILDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 VSVNIGPVQVISSEQV 196
           VSVNIGPVQVISSEQV
Sbjct: 181 VSVNIGPVQVISSEQV 196

[Close]

BLAST of MS014942 vs. ExPASy TrEMBL
Match: A0A6J1KAN5 (uncharacterized protein LOC111493214 OS=Cucurbita maxima OX=3661 GN=LOC111493214 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.0e-85
Identity = 170/195 (87.18%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60
           MAASRTVLRSA+IFL EP RPV   RASSS +LGT R+FTHRL C     RARGF F KR
Sbjct: 1   MAASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKR 60

Query: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVL CS+DETQSTSSSNQD QGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDS+N
Sbjct: 61  TVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSN 120

Query: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180
           EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQ+PIPEGKVRHKLS+KGKYV
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYV 180

Query: 181 SVNIGPVQVISSEQV 196
           SVNIGPVQVISSEQV
Sbjct: 181 SVNIGPVQVISSEQV 195

[Close]

BLAST of MS014942 vs. ExPASy TrEMBL
Match: A0A6J1GWI1 (uncharacterized protein LOC111458218 OS=Cucurbita moschata OX=3662 GN=LOC111458218 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.8e-85
Identity = 169/195 (86.67%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60
           MAASRTVLRSA+IFL EP RPV   RASSS +LGT R+FTHRL C     R RGF F KR
Sbjct: 1   MAASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRVRGFLFPKR 60

Query: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVL CS+DETQSTSSSNQD QGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDS+N
Sbjct: 61  TVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSN 120

Query: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKYV 180
           EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQ+PIPEGKVRHKLS+KGKYV
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYV 180

Query: 181 SVNIGPVQVISSEQV 196
           SVNIGPVQVISSEQV
Sbjct: 181 SVNIGPVQVISSEQV 195

[Close]

BLAST of MS014942 vs. TAIR 10
Match: AT1G27385.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 188.7 bits (478), Expect = 5.0e-48
Identity = 96/137 (70.07%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 59  KRTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDS 118
           + T LNCSH++        Q  QGPPQEAVLKAISEVSKT+GRVG TTNM+IGGTV DDS
Sbjct: 57  RATRLNCSHND--------QSDQGPPQEAVLKAISEVSKTDGRVGKTTNMIIGGTVADDS 116

Query: 119 TNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGK 178
             +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE  V+  LSSKGK
Sbjct: 117 AKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGK 176

Query: 179 YVSVNIGPVQVISSEQV 196
           YVSVNIGP+QV+SSEQV
Sbjct: 177 YVSVNIGPIQVVSSEQV 185

[Close]

BLAST of MS014942 vs. TAIR 10
Match: AT1G27385.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 77 Blast hits to 77 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 188.7 bits (478), Expect = 5.0e-48
Identity = 96/137 (70.07%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 59  KRTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDS 118
           + T LNCSH++        Q  QGPPQEAVLKAISEVSKT+GRVG TTNM+IGGTV DDS
Sbjct: 57  RATRLNCSHND--------QSDQGPPQEAVLKAISEVSKTDGRVGKTTNMIIGGTVADDS 116

Query: 119 TNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGK 178
             +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE  V+  LSSKGK
Sbjct: 117 AKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGK 176

Query: 179 YVSVNIGPVQVISSEQV 196
           YVSVNIGP+QV+SSEQV
Sbjct: 177 YVSVNIGPIQVVSSEQV 185

[Close]

BLAST of MS014942 vs. TAIR 10
Match: AT1G27385.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 182.2 bits (461), Expect = 4.7e-46
Identity = 95/137 (69.34%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 59  KRTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDS 118
           + T LNCSH++        Q  QGPPQEAVLKAIS VSKT+GRVG TTNM+IGGTV DDS
Sbjct: 57  RATRLNCSHND--------QSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDS 116

Query: 119 TNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGK 178
             +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE  V+  LSSKGK
Sbjct: 117 AKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGK 176

Query: 179 YVSVNIGPVQVISSEQV 196
           YVSVNIGP+QV+SSEQV
Sbjct: 177 YVSVNIGPIQVVSSEQV 184

[Close]

BLAST of MS014942 vs. TAIR 10
Match: AT1G27385.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 182.2 bits (461), Expect = 4.7e-46
Identity = 95/137 (69.34%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 59  KRTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDS 118
           + T LNCSH++        Q  QGPPQEAVLKAIS VSKT+GRVG TTNM+IGGTV DDS
Sbjct: 57  RATRLNCSHND--------QSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDS 116

Query: 119 TNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGK 178
             +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE  V+  LSSKGK
Sbjct: 117 AKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGK 176

Query: 179 YVSVNIGPVQVISSEQV 196
           YVSVNIGP+QV+SSEQV
Sbjct: 177 YVSVNIGPIQVVSSEQV 184

The following BLAST results are available for this feature:

BLAST of MS014942 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151740.1	1.3e-101	100.00	uncharacterized protein LOC111019651 isoform X1 [Momordica charantia]	[more]
XP_023542309.1	1.3e-90	90.26	uncharacterized protein LOC111802242 [Cucurbita pepo subsp. pepo]	[more]
XP_022945039.1	6.1e-88	89.29	uncharacterized protein LOC111449401 [Cucurbita moschata]	[more]
XP_022966813.1	7.9e-88	88.78	uncharacterized protein LOC111466408 [Cucurbita maxima]	[more]
XP_022998631.1	6.3e-85	87.18	uncharacterized protein LOC111493214 [Cucurbita maxima]	[more]

BLAST of MS014942 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS014942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC16	6.1e-102	100.00	uncharacterized protein LOC111019651 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FZV2	2.9e-88	89.29	uncharacterized protein LOC111449401 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1HTC4	3.8e-88	88.78	uncharacterized protein LOC111466408 OS=Cucurbita maxima OX=3661 GN=LOC111466408...	[more]
A0A6J1KAN5	3.0e-85	87.18	uncharacterized protein LOC111493214 OS=Cucurbita maxima OX=3661 GN=LOC111493214...	[more]
A0A6J1GWI1	8.8e-85	86.67	uncharacterized protein LOC111458218 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]

BLAST of MS014942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27385.1	5.0e-48	70.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27385.3	5.0e-48	70.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27385.2	4.7e-46	69.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27385.4	4.7e-46	69.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.260		coord: 126..197 e-value: 5.0E-10 score: 41.6
None	No IPR available	PANTHER	PTHR34782	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	coord: 3..195
IPR007454	Uncharacterised protein family UPF0250	PFAM	PF04359	DUF493	coord: 129..195 e-value: 3.2E-11 score: 43.6
IPR027471	YbeD-like domain superfamily	SUPERFAMILY	117991	YbeD/HP0495-like	coord: 127..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014942.1	MS014942.1	mRNA