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MS014608 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGGATCTCCAGAATTGGAGGTCAAAACTTGACATGCAAGTTAATACCTACCGCAGTGTAAGTTAATATATTGCTTGTTATCTTCTTCTTTTCTATGTATTCATATATTTTATATAAGGAATTGTTACTGCGCGCCGCAGTGCCATGTTTTAAGATACTTGTGTTTGAGTTTTCTTTCCTGGGTTTACATGATCCATAAACAAGTCAGAGTAGACTCGAAATTTTGATTCTTGGTGATTCAAAGAGATTTCAAGCCTGCTAATGTTTTCAACATAGGACATTTATTATTTAATCCCTTAATACCTCGGTTATTACAAAAAAAGAAGAAAAACAGAAAGATCGGATATTAATGGTAGTGTGATTTTTCCTTTTGTTGGTCATAGATATTTTCTTTATTTTCTGCTTTTGTATCTGTATATTACGGCAGCACCTGATATATTCCTTCAATGCTTCATGCAGGAACTCTCGGAACTCAAGAAATCGCTAAATGTTGAGGTAGAGAACCTTCGTACGGTAAGAAATGCTTCATAGATTGAATATGCTTTTGAACTTTTGAGTGGTATTCAAAACGGTATGAAATTTGTAGCATAAAAGCAGGAATTCGAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTGCTAGCCTGAGGAACTTGGGTGTAAGTTCTAATTCTATGATTTTACTACCCGAATGTGCAGATGAATTTCCTCGAAACACCTCCAACTCACCCCTCTCCTACCGTATATATTAACCGTAACTAAAGGAAAATACAAATGTTGGCAGCTTCAGGATGTTTCCATGGACAATGACGAGACTCAACGTCAACATCCTATAGCAGAAAGCAGTGACAAGGAAGCACACGACGCAAACGAGGTTAAGGATGGACATGCCTTAACAGAGGACAAGGGGAATGAAGCTGAAAAT CAGGATCTCCAGAATTGGAGGTCAAAACTTGACATGCAAGTTAATACCTACCGCAGTGAACTCTCGGAACTCAAGAAATCGCTAAATGTTGAGGTAGAGAACCTTCGTACGGAATTCGAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTGCTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCATGGACAATGACGAGACTCAACGTCAACATCCTATAGCAGAAAGCAGTGACAAGGAAGCACACGACGCAAACGAGGTTAAGGATGGACATGCCTTAACAGAGGACAAGGGGAATGAAGCTGAAAAT CAGGATCTCCAGAATTGGAGGTCAAAACTTGACATGCAAGTTAATACCTACCGCAGTGAACTCTCGGAACTCAAGAAATCGCTAAATGTTGAGGTAGAGAACCTTCGTACGGAATTCGAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTGCTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCATGGACAATGACGAGACTCAACGTCAACATCCTATAGCAGAAAGCAGTGACAAGGAAGCACACGACGCAAACGAGGTTAAGGATGGACATGCCTTAACAGAGGACAAGGGGAATGAAGCTGAAAAT QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTEDKGNEAEN Homology
BLAST of MS014608 vs. NCBI nr
Match: XP_022137849.1 (uncharacterized protein LOC111009183 [Momordica charantia]) HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MS014608 vs. NCBI nr
Match: XP_022948034.1 (CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata] >KAG7028975.1 hypothetical protein SDJN02_10158 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.0 bits (380), Expect = 5.9e-33 Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of MS014608 vs. NCBI nr
Match: KAG6597517.1 (hypothetical protein SDJN03_10697, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151.0 bits (380), Expect = 5.9e-33 Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of MS014608 vs. NCBI nr
Match: XP_023539906.1 (CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32 Identity = 86/109 (78.90%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of MS014608 vs. NCBI nr
Match: XP_004134206.1 (CAP-Gly domain-containing linker protein 1 [Cucumis sativus] >KAE8650394.1 hypothetical protein Csa_010955 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32 Identity = 87/108 (80.56%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of MS014608 vs. ExPASy TrEMBL
Match: A0A6J1C8F7 (uncharacterized protein LOC111009183 OS=Momordica charantia OX=3673 GN=LOC111009183 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MS014608 vs. ExPASy TrEMBL
Match: A0A6J1G8M8 (CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451732 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.9e-33 Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of MS014608 vs. ExPASy TrEMBL
Match: A0A5D3D134 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00970 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.2e-32 Identity = 90/109 (82.57%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of MS014608 vs. ExPASy TrEMBL
Match: A0A1S3AY29 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483838 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.2e-32 Identity = 90/109 (82.57%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of MS014608 vs. ExPASy TrEMBL
Match: A0A6J1GVY7 (CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457976 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 5.4e-32 Identity = 87/109 (79.82%), Postives = 95/109 (87.16%), Query Frame = 0
BLAST of MS014608 vs. TAIR 10
Match: AT4G15790.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). ) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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