MS014266 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAAGAAGATCGGTTGAAAGACAAGTTTGATATTTTACTGTCCACTTTGGGAGTACGGTTGCCGCCGTCCGTAGGCGAGGAAAATGAAGATCGGCCCGAGGATTTGAAGACTCCCACATCCTCGGAGGCTGCGGCGGTTCTTCAGTGTCCGCCGCCGCCGAGAAAGCCGAAAAGGCTGCCGTCGATGAAACGGAAGGCGCGTGGGCGGTCAATTGTGATGCCCCATAATTTGTTCGTCGAAATGGAGTTGATGTTTCCTCCGCATGATCTCCTCGGCGGTAAGGTTGTTAAGAAAGTTAAACGACCGGCG GAGGAAGAAGATCGGTTGAAAGACAAGTTTGATATTTTACTGTCCACTTTGGGAGTACGGTTGCCGCCGTCCGTAGGCGAGGAAAATGAAGATCGGCCCGAGGATTTGAAGACTCCCACATCCTCGGAGGCTGCGGCGGTTCTTCAGTGTCCGCCGCCGCCGAGAAAGCCGAAAAGGCTGCCGTCGATGAAACGGAAGGCGCGTGGGCGGTCAATTGTGATGCCCCATAATTTGTTCGTCGAAATGGAGTTGATGTTTCCTCCGCATGATCTCCTCGGCGGTAAGGTTGTTAAGAAAGTTAAACGACCGGCG GAGGAAGAAGATCGGTTGAAAGACAAGTTTGATATTTTACTGTCCACTTTGGGAGTACGGTTGCCGCCGTCCGTAGGCGAGGAAAATGAAGATCGGCCCGAGGATTTGAAGACTCCCACATCCTCGGAGGCTGCGGCGGTTCTTCAGTGTCCGCCGCCGCCGAGAAAGCCGAAAAGGCTGCCGTCGATGAAACGGAAGGCGCGTGGGCGGTCAATTGTGATGCCCCATAATTTGTTCGTCGAAATGGAGTTGATGTTTCCTCCGCATGATCTCCTCGGCGGTAAGGTTGTTAAGAAAGTTAAACGACCGGCG EEEDRLKDKFDILLSTLGVRLPPSVGEENEDRPEDLKTPTSSEAAAVLQCPPPPRKPKRLPSMKRKARGRSIVMPHNLFVEMELMFPPHDLLGGKVVKKVKRPA Homology
BLAST of MS014266 vs. NCBI nr
Match: XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima]) HSP 1 Score: 104.8 bits (260), Expect = 4.7e-19 Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of MS014266 vs. NCBI nr
Match: XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 99.8 bits (247), Expect = 1.5e-17 Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 0
BLAST of MS014266 vs. NCBI nr
Match: KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of MS014266 vs. NCBI nr
Match: XP_022947800.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata]) HSP 1 Score: 95.5 bits (236), Expect = 2.9e-16 Identity = 57/115 (49.57%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of MS014266 vs. NCBI nr
Match: KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-14 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of MS014266 vs. ExPASy Swiss-Prot
Match: Q9LTJ2 (Cyclin-dependent protein kinase inhibitor SMR14 OS=Arabidopsis thaliana OX=3702 GN=SMR14 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.6e-04 Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of MS014266 vs. ExPASy TrEMBL
Match: A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.3e-19 Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of MS014266 vs. ExPASy TrEMBL
Match: A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.4e-16 Identity = 57/115 (49.57%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of MS014266 vs. ExPASy TrEMBL
Match: A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.4e-14 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = 0
BLAST of MS014266 vs. ExPASy TrEMBL
Match: A0A6P3Z9D7 (cyclin-dependent protein kinase inhibitor SMR10 OS=Ziziphus jujuba OX=326968 GN=LOC107411099 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11 Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of MS014266 vs. ExPASy TrEMBL
Match: A0A5N5LFK3 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_013780 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of MS014266 vs. TAIR 10
Match: AT5G59360.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 5.4e-05 Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of MS014266 vs. TAIR 10
Match: AT2G28870.1 (unknown protein; Has 34 Blast hits to 34 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 3.5e-04 Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|