MS014172 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAACAGTTTAAGGTGTTGTTTGGCGTGTGTTCTTCCCTGTGGAGCTCTGGATTTGATCCGGATCGTCCATTTGAACGGCCACGTGGAAGAAATCGCCCATCCGATCACCGCCGGCGAAGTCCTCGAAGCAAACCCAAATCACGTTCTGAGTAAGCCTTGCTCCCAAGGGGTCGTTCGCCGGATTCTGATTCTCTCGCCGGAATCGGAGCTCAAAAGGGGCAGCATTTATTTCTTGATTCCGGCCACCTCTCTGCCGGACAAAAAAAGAAACACTGCCAGCACCCTAAAGAAATCCTCTAGAAAAACCAAGAGCAACACCCCCGACGCCGCCGCCGCCGCCGCCGCCGCCGCCGTAGACTGTGATTCTTACCTCTCGGAGATTGTCTCCGACAAGAAATCTTCTCGGCGGGACCGCCGCGGCGGCCGCGTCGTCGTATGGCGCCCCCATTTAGAGAGCATCTCCGAG ATGGGTAACAGTTTAAGGTGTTGTTTGGCGTGTGTTCTTCCCTGTGGAGCTCTGGATTTGATCCGGATCGTCCATTTGAACGGCCACGTGGAAGAAATCGCCCATCCGATCACCGCCGGCGAAGTCCTCGAAGCAAACCCAAATCACGTTCTGAGTAAGCCTTGCTCCCAAGGGGTCGTTCGCCGGATTCTGATTCTCTCGCCGGAATCGGAGCTCAAAAGGGGCAGCATTTATTTCTTGATTCCGGCCACCTCTCTGCCGGACAAAAAAAGAAACACTGCCAGCACCCTAAAGAAATCCTCTAGAAAAACCAAGAGCAACACCCCCGACGCCGCCGCCGCCGCCGCCGCCGCCGCCGTAGACTGTGATTCTTACCTCTCGGAGATTGTCTCCGACAAGAAATCTTCTCGGCGGGACCGCCGCGGCGGCCGCGTCGTCGTATGGCGCCCCCATTTAGAGAGCATCTCCGAG ATGGGTAACAGTTTAAGGTGTTGTTTGGCGTGTGTTCTTCCCTGTGGAGCTCTGGATTTGATCCGGATCGTCCATTTGAACGGCCACGTGGAAGAAATCGCCCATCCGATCACCGCCGGCGAAGTCCTCGAAGCAAACCCAAATCACGTTCTGAGTAAGCCTTGCTCCCAAGGGGTCGTTCGCCGGATTCTGATTCTCTCGCCGGAATCGGAGCTCAAAAGGGGCAGCATTTATTTCTTGATTCCGGCCACCTCTCTGCCGGACAAAAAAAGAAACACTGCCAGCACCCTAAAGAAATCCTCTAGAAAAACCAAGAGCAACACCCCCGACGCCGCCGCCGCCGCCGCCGCCGCCGCCGTAGACTGTGATTCTTACCTCTCGGAGATTGTCTCCGACAAGAAATCTTCTCGGCGGGACCGCCGCGGCGGCCGCGTCGTCGTATGGCGCCCCCATTTAGAGAGCATCTCCGAG MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKSSRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE Homology
BLAST of MS014172 vs. NCBI nr
Match: XP_038902054.1 (uncharacterized protein LOC120088703 [Benincasa hispida]) HSP 1 Score: 252.3 bits (643), Expect = 2.8e-63 Identity = 131/157 (83.44%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of MS014172 vs. NCBI nr
Match: XP_004149378.1 (uncharacterized protein LOC101207122 [Cucumis sativus] >KGN47230.1 hypothetical protein Csa_017034 [Cucumis sativus]) HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62 Identity = 128/157 (81.53%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of MS014172 vs. NCBI nr
Match: XP_023534513.1 (uncharacterized protein LOC111796057 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248.8 bits (634), Expect = 3.0e-62 Identity = 131/158 (82.91%), Postives = 140/158 (88.61%), Query Frame = 0
BLAST of MS014172 vs. NCBI nr
Match: XP_023007260.1 (uncharacterized protein LOC111499799 [Cucurbita maxima]) HSP 1 Score: 248.1 bits (632), Expect = 5.2e-62 Identity = 130/158 (82.28%), Postives = 140/158 (88.61%), Query Frame = 0
BLAST of MS014172 vs. NCBI nr
Match: XP_022947823.1 (uncharacterized protein LOC111451584 [Cucurbita moschata] >KAG6605391.1 hypothetical protein SDJN03_02708, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61 Identity = 130/158 (82.28%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of MS014172 vs. ExPASy TrEMBL
Match: A0A0A0KBY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G217470 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 6.6e-63 Identity = 128/157 (81.53%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of MS014172 vs. ExPASy TrEMBL
Match: A0A6J1L2H4 (uncharacterized protein LOC111499799 OS=Cucurbita maxima OX=3661 GN=LOC111499799 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.5e-62 Identity = 130/158 (82.28%), Postives = 140/158 (88.61%), Query Frame = 0
BLAST of MS014172 vs. ExPASy TrEMBL
Match: A0A6J1G7P3 (uncharacterized protein LOC111451584 OS=Cucurbita moschata OX=3662 GN=LOC111451584 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.6e-62 Identity = 130/158 (82.28%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of MS014172 vs. ExPASy TrEMBL
Match: A0A5A7UMR0 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold55219G00010 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61 Identity = 128/158 (81.01%), Postives = 138/158 (87.34%), Query Frame = 0
BLAST of MS014172 vs. ExPASy TrEMBL
Match: A0A1S3CK32 (uncharacterized protein LOC103501874 OS=Cucumis melo OX=3656 GN=LOC103501874 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61 Identity = 128/158 (81.01%), Postives = 138/158 (87.34%), Query Frame = 0
BLAST of MS014172 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 192.2 bits (487), Expect = 3.2e-49 Identity = 107/169 (63.31%), Postives = 119/169 (70.41%), Query Frame = 0
BLAST of MS014172 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 186.0 bits (471), Expect = 2.3e-47 Identity = 101/174 (58.05%), Postives = 122/174 (70.11%), Query Frame = 0
BLAST of MS014172 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 142.1 bits (357), Expect = 3.7e-34 Identity = 84/188 (44.68%), Postives = 116/188 (61.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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