MS013985 (gene) Bitter gourd (TR) v1

Overview


Name	MS013985
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Beta-galactosidase
Location	scaffold607: 1427975 .. 1428331 (-)
RNA-Seq Expression	MS013985
Synteny	MS013985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCAATTTGCGGTGGTGTTGTTTTGTTGGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGGCAAGCGGAGAGTCTTGGTTTCTGGATCTATACACTATCCTCGCAGTACCCCGAGGTTTGTTTTCTTCATTCTCCACACTTCAATGTTTCTGTTTGAATCAGTCTTGAGTTTATACCTCTGGAATCTTCAGATGTGGCCGGACCTTATTCAGAAATCGAAGGAGGGAGGTTTGGATGTAATCGAGACTTATGTGTTCTGGAATTTACATGAACCAGTTCGAAACCAGGTACATTTTGCGAATTCTTCG

mRNA sequence

AGTTCAATTTGCGGTGGTGTTGTTTTGTTGGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGGCAAGCGGAGAGTCTTGGTTTCTGGATCTATACACTATCCTCGCAGTACCCCGAGGTTTGTTTTCTTCATTCTCCACACTTCAATGTTTCTGTTTGAATCAGTCTTGAGTTTATACCTCTGGAATCTTCAGATGTGGCCGGACCTTATTCAGAAATCGAAGGAGGGAGGTTTGGATGTAATCGAGACTTATGTGTTCTGGAATTTACATGAACCAGTTCGAAACCAGGTACATTTTGCGAATTCTTCG

Coding sequence (CDS)

AGTTCAATTTGCGGTGGTGTTGTTTTGTTGGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGGCAAGCGGAGAGTCTTGGTTTCTGGATCTATACACTATCCTCGCAGTACCCCGAGGTTTGTTTTCTTCATTCTCCACACTTCAATGTTTCTGTTTGAATCAGTCTTGAGTTTATACCTCTGGAATCTTCAGATGTGGCCGGACCTTATTCAGAAATCGAAGGAGGGAGGTTTGGATGTAATCGAGACTTATGTGTTCTGGAATTTACATGAACCAGTTCGAAACCAGGTACATTTTGCGAATTCTTCG

Protein sequence

SSICGGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHFANSS

Homology

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BLAST of MS013985 vs. NCBI nr
Match: XP_022156948.1 (beta-galactosidase 8 [Momordica charantia] >XP_022156949.1 beta-galactosidase 8 [Momordica charantia] >XP_022156950.1 beta-galactosidase 8 [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 5.5e-32
Identity = 79/109 (72.48%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVLAS SLANAANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLASSSLANAANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQYDF 93

[Close]

BLAST of MS013985 vs. NCBI nr
Match: XP_023523286.1 (beta-galactosidase 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523287.1 beta-galactosidase 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523289.1 beta-galactosidase 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523291.1 beta-galactosidase 8-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29
Identity = 76/109 (69.72%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLDSFSL--AANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSK+GGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYDF 91

[Close]

BLAST of MS013985 vs. NCBI nr
Match: XP_022948717.1 (beta-galactosidase 8-like [Cucurbita moschata] >XP_022948718.1 beta-galactosidase 8-like [Cucurbita moschata] >XP_022948719.1 beta-galactosidase 8-like [Cucurbita moschata] >XP_022948720.1 beta-galactosidase 8-like [Cucurbita moschata])

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29
Identity = 76/109 (69.72%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLDSFSL--AANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSK+GGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYDF 91

[Close]

BLAST of MS013985 vs. NCBI nr
Match: KAG7036874.1 (Beta-galactosidase 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29
Identity = 76/109 (69.72%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLDSFSL--AANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSK+GGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYDF 91

[Close]

BLAST of MS013985 vs. NCBI nr
Match: XP_022997931.1 (beta-galactosidase 8-like [Cucurbita maxima] >XP_022997932.1 beta-galactosidase 8-like [Cucurbita maxima] >XP_022997933.1 beta-galactosidase 8-like [Cucurbita maxima] >XP_022997934.1 beta-galactosidase 8-like [Cucurbita maxima])

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-28
Identity = 75/109 (68.81%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLDSFSL--AANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSK+GGLDVIETYVFWNLHEP RNQ  F
Sbjct: 70  -------------EMWPDLIQKSKDGGLDVIETYVFWNLHEPFRNQYDF 91

[Close]

BLAST of MS013985 vs. ExPASy Swiss-Prot
Match: Q5Z7L0 (Beta-galactosidase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0573600 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.2e-25
Identity = 60/113 (53.10%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 5   GGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTS 64
           GG V  +L ++A+ ++ANAA VTYDHR+L ING+RR+L+SGSIHYPRSTP          
Sbjct: 3   GGAVAFLL-LVAAAAVANAA-VTYDHRSLTINGQRRILISGSIHYPRSTP---------- 62

Query: 65  MFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHFAN 118
                          +MWPDLIQK+K+GGLDVI+TYVFWN HEPV+ Q +F++
Sbjct: 63  ---------------EMWPDLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSD 88

[Close]

BLAST of MS013985 vs. ExPASy Swiss-Prot
Match: Q9SCV4 (Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 6.8e-25
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP            
Sbjct: 16  ILLLILVIVVA---ATAANVTYDHRALVIDGKRKVLISGSIHYPRSTP------------ 75

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWP+LIQKSK+GGLDVIETYVFW+ HEP +N+ +F
Sbjct: 76  -------------EMWPELIQKSKDGGLDVIETYVFWSGHEPEKNKYNF 96

[Close]

BLAST of MS013985 vs. ExPASy Swiss-Prot
Match: Q10NX8 (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 9.9e-24
Identity = 62/111 (55.86%), Postives = 70/111 (63.06%), Query Frame = 0


Query: 9   LLVLGVLASFSL----ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTS 68
           LL+L V+   SL    + AANVTYDHRA+VI+G RRVLVSGSIHYPRSTP          
Sbjct: 12  LLLLPVVVVVSLLVGASRAANVTYDHRAVVIDGVRRVLVSGSIHYPRSTP---------- 71

Query: 69  MFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                           MWP LIQKSK+GGLDVIETYVFW++HE VR Q  F
Sbjct: 72  ---------------DMWPGLIQKSKDGGLDVIETYVFWDIHEAVRGQYDF 97

[Close]

BLAST of MS013985 vs. ExPASy Swiss-Prot
Match: A2X2H7 (Beta-galactosidase 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006270 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.9e-23
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 9   LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLF 68
           L+   + AS  +ANAA V+YD R+LVING+RR+L+SGSIHYPRSTP              
Sbjct: 22  LVAASLAASVGVANAA-VSYDRRSLVINGRRRILLSGSIHYPRSTP-------------- 81

Query: 69  ESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHFAN 118
                      +MWP LIQK+K+GGLDVI+TYVFWN HEPV+ Q +F++
Sbjct: 82  -----------EMWPGLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSD 104

[Close]

BLAST of MS013985 vs. ExPASy Swiss-Prot
Match: Q6Z6K4 (Beta-galactosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0219200 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.9e-23
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 9   LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLF 68
           L+   + AS  +ANAA V+YD R+LVING+RR+L+SGSIHYPRSTP              
Sbjct: 22  LVAASLAASVGVANAA-VSYDRRSLVINGRRRILLSGSIHYPRSTP-------------- 81

Query: 69  ESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHFAN 118
                      +MWP LIQK+K+GGLDVI+TYVFWN HEPV+ Q +F++
Sbjct: 82  -----------EMWPGLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSD 104

[Close]

BLAST of MS013985 vs. ExPASy TrEMBL
Match: A0A6J1DS30 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111023780 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.7e-32
Identity = 79/109 (72.48%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVLAS SLANAANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLASSSLANAANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQYDF 93

[Close]

BLAST of MS013985 vs. ExPASy TrEMBL
Match: A0A6J1GAP4 (Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111452305 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 76/109 (69.72%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLDSFSL--AANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSK+GGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYDF 91

[Close]

BLAST of MS013985 vs. ExPASy TrEMBL
Match: A0A6J1KCX5 (Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111492733 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.2e-29
Identity = 75/109 (68.81%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP            
Sbjct: 10  VVLLVLGVLDSFSL--AANVTYDHRALVIDGKRRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWPDLIQKSK+GGLDVIETYVFWNLHEP RNQ  F
Sbjct: 70  -------------EMWPDLIQKSKDGGLDVIETYVFWNLHEPFRNQYDF 91

[Close]

BLAST of MS013985 vs. ExPASy TrEMBL
Match: A0A6J1I3D1 (Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111469557 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 72/109 (66.06%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVL+V GVL SFSL  AANVTYDHRALVI+G+RRVLVSGSIHYPRSTP            
Sbjct: 10  VVLVVFGVLDSFSL--AANVTYDHRALVIDGERRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWP LIQKSK+GGLDVIETYVFWNLHEPVRNQ +F
Sbjct: 70  -------------EMWPGLIQKSKDGGLDVIETYVFWNLHEPVRNQYNF 91

[Close]

BLAST of MS013985 vs. ExPASy TrEMBL
Match: A0A6J1HIP2 (Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111464792 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.8e-27
Identity = 71/109 (65.14%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           VVL+V GVL SFSL  AANVTYDHRALVI+G+RRVLVSGSIHYPRSTP            
Sbjct: 10  VVLVVFGVLDSFSL--AANVTYDHRALVIDGERRVLVSGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWP LIQKS++GGLDVIETYVFWNLHEPVRNQ  F
Sbjct: 70  -------------EMWPGLIQKSEDGGLDVIETYVFWNLHEPVRNQYDF 91

[Close]

BLAST of MS013985 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP            
Sbjct: 16  ILLLILVIVVA---ATAANVTYDHRALVIDGKRKVLISGSIHYPRSTP------------ 75

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWP+LIQKSK+GGLDVIETYVFW+ HEP +N+ +F
Sbjct: 76  -------------EMWPELIQKSKDGGLDVIETYVFWSGHEPEKNKYNF 96

[Close]

BLAST of MS013985 vs. TAIR 10
Match: AT2G28470.2 (beta-galactosidase 8 )

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 7   VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMF 66
           ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP            
Sbjct: 10  ILLLILVIVVA---ATAANVTYDHRALVIDGKRKVLISGSIHYPRSTP------------ 69

Query: 67  LFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                        +MWP+LIQKSK+GGLDVIETYVFW+ HEP +N+ +F
Sbjct: 70  -------------EMWPELIQKSKDGGLDVIETYVFWSGHEPEKNKYNF 90

[Close]

BLAST of MS013985 vs. TAIR 10
Match: AT3G52840.1 (beta-galactosidase 2 )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 10  LVLGVLASFSLANA--ANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFL 69
           ++L +L   SL ++  A VTYDH+AL+ING+RR+L+SGSIHYPRSTP             
Sbjct: 11  IILAILCFSSLIHSTEAVVTYDHKALIINGQRRILISGSIHYPRSTP------------- 70

Query: 70  FESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                       +MWPDLI+K+KEGGLDVI+TYVFWN HEP     +F
Sbjct: 71  ------------EMWPDLIKKAKEGGLDVIQTYVFWNGHEPSPGNYYF 93

[Close]

BLAST of MS013985 vs. TAIR 10
Match: AT4G26140.1 (beta-galactosidase 12 )

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 10  LVLGVLASFSL--ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFL 69
           ++LG+L   SL  +  A VTYD +A++ING+RR+L+SGSIHYPRSTP             
Sbjct: 11  ILLGILCCSSLICSVKAIVTYDRKAVIINGQRRILLSGSIHYPRSTP------------- 70

Query: 70  FESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                       +MWPDLIQK+K+GGLDVI+TYVFWN HEP   Q +F
Sbjct: 71  ------------EMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYF 93

[Close]

BLAST of MS013985 vs. TAIR 10
Match: AT4G26140.2 (beta-galactosidase 12 )

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 10  LVLGVLASFSL--ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFL 69
           ++LG+L   SL  +  A VTYD +A++ING+RR+L+SGSIHYPRSTP             
Sbjct: 11  ILLGILCCSSLICSVKAIVTYDRKAVIINGQRRILLSGSIHYPRSTP------------- 70

Query: 70  FESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVRNQVHF 116
                       +MWPDLIQK+K+GGLDVI+TYVFWN HEP   Q +F
Sbjct: 71  ------------EMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYF 93

The following BLAST results are available for this feature:

BLAST of MS013985 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156948.1	5.5e-32	72.48	beta-galactosidase 8 [Momordica charantia] >XP_022156949.1 beta-galactosidase 8 ...	[more]
XP_023523286.1	3.4e-29	69.72	beta-galactosidase 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523287....	[more]
XP_022948717.1	3.4e-29	69.72	beta-galactosidase 8-like [Cucurbita moschata] >XP_022948718.1 beta-galactosidas...	[more]
KAG7036874.1	3.4e-29	69.72	Beta-galactosidase 8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997931.1	1.3e-28	68.81	beta-galactosidase 8-like [Cucurbita maxima] >XP_022997932.1 beta-galactosidase ...	[more]

BLAST of MS013985 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5Z7L0	5.2e-25	53.10	Beta-galactosidase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0573600 PE...	[more]
Q9SCV4	6.8e-25	54.13	Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2	[more]
Q10NX8	9.9e-24	55.86	Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE...	[more]
A2X2H7	4.9e-23	51.38	Beta-galactosidase 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006270 PE=3 S...	[more]
Q6Z6K4	4.9e-23	51.38	Beta-galactosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0219200 PE...	[more]

BLAST of MS013985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS30	2.7e-32	72.48	Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111023780 PE=3 SV=1	[more]
A0A6J1GAP4	1.6e-29	69.72	Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111452305 PE=3 SV=1	[more]
A0A6J1KCX5	6.2e-29	68.81	Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111492733 PE=3 SV=1	[more]
A0A6J1I3D1	1.2e-27	66.06	Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111469557 PE=3 SV=1	[more]
A0A6J1HIP2	5.8e-27	65.14	Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111464792 PE=3 SV=1	[more]

BLAST of MS013985 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28470.1	4.8e-26	54.13	beta-galactosidase 8	[more]
AT2G28470.2	4.8e-26	54.13	beta-galactosidase 8	[more]
AT3G52840.1	2.3e-23	50.00	beta-galactosidase 2	[more]
AT4G26140.1	1.1e-22	50.00	beta-galactosidase 12	[more]
AT4G26140.2	1.1e-22	50.00	beta-galactosidase 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031330	Glycoside hydrolase 35, catalytic domain	PFAM	PF01301	Glyco_hydro_35	coord: 79..116 e-value: 3.8E-11 score: 43.2 coord: 33..56 e-value: 2.3E-4 score: 20.9
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 17..119 e-value: 1.1E-25 score: 92.7
None	No IPR available	PANTHER	PTHR23421:SF150	BETA-GALACTOSIDASE	coord: 7..65 coord: 80..116
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 7..65 coord: 80..116
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 25..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013985.1	MS013985.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds