MS013973 (gene) Bitter gourd (TR) v1

Overview


Name	MS013973
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	class I heat shock protein-like
Location	scaffold607: 1350343 .. 1350774 (+)
RNA-Seq Expression	MS013973
Synteny	MS013973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTGATTCCAACTCTGTTCGGCAACAGGGGCGTGTTCGACCCCTTCTTGTCGGATCTGTGGGCACCGATTGGCTCCAACAGTGAAGTGTCCTCGTTCGCCAACGCGCAGGTGGACTGGAAGGAGACCCCAGAGGCGCACATTTTCAAGGCGGATCTGCCGGGGCTGAAGAAGGAAGAGGTGAAGGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGCGGTGGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGCGTGGAGAGGGGGCGGGGGAAGTTCGCCAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTTGATGAAGTGAAGGCGTCGATGGAGAACGGGGTTCTGACGGTCACCGTTCCCAAACTGCCGGAGAAGAAGCCGGCGATCAAATCGGTTGAAATCTCCGGC

mRNA sequence

ATGTCTCTGATTCCAACTCTGTTCGGCAACAGGGGCGTGTTCGACCCCTTCTTGTCGGATCTGTGGGCACCGATTGGCTCCAACAGTGAAGTGTCCTCGTTCGCCAACGCGCAGGTGGACTGGAAGGAGACCCCAGAGGCGCACATTTTCAAGGCGGATCTGCCGGGGCTGAAGAAGGAAGAGGTGAAGGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGCGGTGGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGCGTGGAGAGGGGGCGGGGGAAGTTCGCCAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTTGATGAAGTGAAGGCGTCGATGGAGAACGGGGTTCTGACGGTCACCGTTCCCAAACTGCCGGAGAAGAAGCCGGCGATCAAATCGGTTGAAATCTCCGGC

Coding sequence (CDS)

ATGTCTCTGATTCCAACTCTGTTCGGCAACAGGGGCGTGTTCGACCCCTTCTTGTCGGATCTGTGGGCACCGATTGGCTCCAACAGTGAAGTGTCCTCGTTCGCCAACGCGCAGGTGGACTGGAAGGAGACCCCAGAGGCGCACATTTTCAAGGCGGATCTGCCGGGGCTGAAGAAGGAAGAGGTGAAGGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGCGGTGGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGCGTGGAGAGGGGGCGGGGGAAGTTCGCCAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTTGATGAAGTGAAGGCGTCGATGGAGAACGGGGTTCTGACGGTCACCGTTCCCAAACTGCCGGAGAAGAAGCCGGCGATCAAATCGGTTGAAATCTCCGGC

Protein sequence

MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG

Homology

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BLAST of MS013973 vs. NCBI nr
Match: XP_022151476.1 (class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 283.9 bits (725), Expect = 7.8e-73
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFR+PQNAKVDEVKASMEN
Sbjct: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRVPQNAKVDEVKASMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPKLPEKKPAIKSVEISG
Sbjct: 121 GVLTVTVPKLPEKKPAIKSVEISG 144

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BLAST of MS013973 vs. NCBI nr
Match: XP_008448675.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0045107.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK23631.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 129/144 (89.58%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP+LFG+R VFDPFLSD+WAP G+  EVSSFANAQVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGA-GEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGG+LQISGERAVEKEEKNEKWHRVERG+GKF RRFRLPQNAKVDEVKA+MEN
Sbjct: 61  EVKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPK+PEKKPA KS+EISG
Sbjct: 121 GVLTVTVPKVPEKKPATKSIEISG 143

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BLAST of MS013973 vs. NCBI nr
Match: XP_038881342.1 (class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 3.0e-64
Identity = 130/144 (90.28%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP+LFGNRGVFDPFLSDLWAP  S  EVSSFAN Q+DWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSLFGNRGVFDPFLSDLWAP-ASVGEVSSFANTQIDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGGVLQISGER VEKEEKNEKWHRVERG+GKF RRFRLP NAKVDEVKA MEN
Sbjct: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPHNAKVDEVKAGMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTV K+PEKKPAIKSVEISG
Sbjct: 121 GVLTVTVTKVPEKKPAIKSVEISG 143

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BLAST of MS013973 vs. NCBI nr
Match: XP_004147911.1 (17.6 kDa class I heat shock protein 3 [Cucumis sativus] >KGN54322.1 hypothetical protein Csa_018077 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 4.3e-63
Identity = 124/144 (86.11%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP+LFG R VFDPFLSD+WA  G+  EVSSFAN QVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGA-GEVSSFANTQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGG+LQISGERAVEKEEKNEKWHRVERG+GKF R+FRLPQNAKVDEVKA+MEN
Sbjct: 61  EVKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVT+PK+PEKKPA KS+EI+G
Sbjct: 121 GVLTVTIPKVPEKKPATKSIEIAG 143

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BLAST of MS013973 vs. NCBI nr
Match: XP_022950131.1 (18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 7.4e-63
Identity = 125/144 (86.81%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP++FG R +FDPFLSD+WAP  + SE SSFAN QVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSVFGTRSLFDPFLSDIWAPT-TASEASSFANTQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGGVLQISGER VEKEEKNEKWHRVERG+GKF RRFRLPQNAKV+EVKA+MEN
Sbjct: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPK+PEKKPA+KSVEISG
Sbjct: 121 GVLTVTVPKVPEKKPAVKSVEISG 143

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BLAST of MS013973 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.5e-53
Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI-------------GSNSEVSSFANAQVDWKETP 60
           MSLIP++FG R   VFDPF  DLW P               +  +V++F NA+VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER+ E EEKN+KWHRVER  GKF RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           P+NAK++EVKA+MENGVLTV VPK PEKKP +KS++ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

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BLAST of MS013973 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 2.7e-52
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI-----------GSNSEVSSFANAQVDWKETPEA 60
           MSLIP++FG R   VFDPF  D++ P                +V++F NA+VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER+ E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           NAK++E+KASMENGVL+VTVPK+PEKKP +KS++ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

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BLAST of MS013973 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-51
Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI----------GSNSEVSSFANAQVDWKETPEAH 60
           MSL+P+ FG R   VFDPF  D+W P               +V++F NA+VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER+ E EEK++ WHRVER  GKF RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           AKV+EVKASMENGVL+VTVPK+ E KP +KSV+ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

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BLAST of MS013973 vs. ExPASy Swiss-Prot
Match: O82012 (17.6 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-50
Identity = 103/154 (66.88%), Postives = 122/154 (79.22%), Query Frame = 0


Query: 1   MSLIPTLFGNR---GVFDPFLSDLWAP-------IGSNSEVSSFANAQVDWKETPEAHIF 60
           MSLIP +FG+R    VFDPF  D++ P       + ++ E S+FAN ++DWKETPEAH+F
Sbjct: 1   MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVF 60

Query: 61  KADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAK 120
           KADLPGLKKEEVKVEVE+  VLQISGER VEKE+KN+ WHRVER  GKF RRFRLP+NAK
Sbjct: 61  KADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           +D+VKASMENGVLTVTVPK     P +KS+EISG
Sbjct: 121 MDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154

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BLAST of MS013973 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-50
Identity = 103/154 (66.88%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI--------GSNSEVSSFANAQVDWKETPEAHIF 60
           MSLIP  FG R   VFDPF  D+W P           ++E S+F + +VDWKETPEAH+F
Sbjct: 1   MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVF 60

Query: 61  KADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAK 120
           KAD+PGLKKEEVKV++ED  VLQISGER VEKE+KN+ WHRVER  GKF RRFRLP+NAK
Sbjct: 61  KADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           V+EVKASMENGVLTVTVPK   KKP +K++EISG
Sbjct: 121 VNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

[Close]

BLAST of MS013973 vs. ExPASy TrEMBL
Match: A0A6J1DES4 (class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111019408 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.8e-73
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFR+PQNAKVDEVKASMEN
Sbjct: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRVPQNAKVDEVKASMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPKLPEKKPAIKSVEISG
Sbjct: 121 GVLTVTVPKLPEKKPAIKSVEISG 144

[Close]

BLAST of MS013973 vs. ExPASy TrEMBL
Match: A0A5A7TT84 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001480 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 129/144 (89.58%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP+LFG+R VFDPFLSD+WAP G+  EVSSFANAQVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGA-GEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGG+LQISGERAVEKEEKNEKWHRVERG+GKF RRFRLPQNAKVDEVKA+MEN
Sbjct: 61  EVKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPK+PEKKPA KS+EISG
Sbjct: 121 GVLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of MS013973 vs. ExPASy TrEMBL
Match: A0A1S3BK89 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 129/144 (89.58%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP+LFG+R VFDPFLSD+WAP G+  EVSSFANAQVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGA-GEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGG+LQISGERAVEKEEKNEKWHRVERG+GKF RRFRLPQNAKVDEVKA+MEN
Sbjct: 61  EVKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPK+PEKKPA KS+EISG
Sbjct: 121 GVLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of MS013973 vs. ExPASy TrEMBL
Match: A0A0A0L154 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 124/144 (86.11%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP+LFG R VFDPFLSD+WA  G+  EVSSFAN QVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGA-GEVSSFANTQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGG+LQISGERAVEKEEKNEKWHRVERG+GKF R+FRLPQNAKVDEVKA+MEN
Sbjct: 61  EVKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVT+PK+PEKKPA KS+EI+G
Sbjct: 121 GVLTVTIPKVPEKKPATKSIEIAG 143

[Close]

BLAST of MS013973 vs. ExPASy TrEMBL
Match: A0A6J1GDY5 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111453310 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.6e-63
Identity = 125/144 (86.81%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MSLIPTLFGNRGVFDPFLSDLWAPIGSNSEVSSFANAQVDWKETPEAHIFKADLPGLKKE 60
           MSLIP++FG R +FDPFLSD+WAP  + SE SSFAN QVDWKETPEAHIFKADLPGLKKE
Sbjct: 1   MSLIPSVFGTRSLFDPFLSDIWAPT-TASEASSFANTQVDWKETPEAHIFKADLPGLKKE 60

Query: 61  EVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKVDEVKASMEN 120
           EVKVEVEDGGVLQISGER VEKEEKNEKWHRVERG+GKF RRFRLPQNAKV+EVKA+MEN
Sbjct: 61  EVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMEN 120

Query: 121 GVLTVTVPKLPEKKPAIKSVEISG 145
           GVLTVTVPK+PEKKPA+KSVEISG
Sbjct: 121 GVLTVTVPKVPEKKPAVKSVEISG 143

[Close]

BLAST of MS013973 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-54
Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI-------------GSNSEVSSFANAQVDWKETP 60
           MSLIP++FG R   VFDPF  DLW P               +  +V++F NA+VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER+ E EEKN+KWHRVER  GKF RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           P+NAK++EVKA+MENGVLTV VPK PEKKP +KS++ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of MS013973 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI-----------GSNSEVSSFANAQVDWKETPEA 60
           MSLIP++FG R   VFDPF  D++ P                +V++F NA+VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER+ E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           NAK++E+KASMENGVL+VTVPK+PEKKP +KS++ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of MS013973 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-52
Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MSLIPTLFGNR--GVFDPFLSDLWAPI----------GSNSEVSSFANAQVDWKETPEAH 60
           MSL+P+ FG R   VFDPF  D+W P               +V++F NA+VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER+ E EEK++ WHRVER  GKF RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVDEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           AKV+EVKASMENGVL+VTVPK+ E KP +KSV+ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of MS013973 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48
Identity = 95/153 (62.09%), Postives = 117/153 (76.47%), Query Frame = 0


Query: 1   MSLIPTLFGNR---GVFDPFLSDLWAPI------GSNSEVSSFANAQVDWKETPEAHIFK 60
           MS+IP+ F N     +FDPF  D+W P         + E S+  NA+VDW+ETPEAH+FK
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFK 60

Query: 61  ADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNAKV 120
           ADLPGLKKEEVKVE+E+  VL+ISGER VEKE+KN+ WHRVER  G+F RRFRLP+N K+
Sbjct: 61  ADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM 120

Query: 121 DEVKASMENGVLTVTVPKLPEKKPAIKSVEISG 145
           D+VKA+MENGVLTVTVPK   KK  +KS++ISG
Sbjct: 121 DQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of MS013973 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 3.2e-48
Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 1   MSLIPTLFGN----RGVFDPFLSDLWAPI-------GSNSEVSSFANAQVDWKETPEAHI 60
           MSLIP+ FGN      +FDPF  D+W P          + E S+  NA+VDWKET EAH+
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 61  FKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNEKWHRVERGRGKFARRFRLPQNA 120
           FKADLPG+KKEEVKVE+ED  VL+ISGER VEKEEK + WHRVER  G+F+R+F+LP+N 
Sbjct: 61  FKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENV 120

Query: 121 KVDEVKASMENGVLTVTVPKLPE--KKPAIKSVEISG 145
           K+D+VKASMENGVLTVTVPK+ E  KK  +KS++ISG
Sbjct: 121 KMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of MS013973 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151476.1	7.8e-73	99.31	class I heat shock protein-like [Momordica charantia]	[more]
XP_008448675.1	2.7e-65	89.58	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0045107.1...	[more]
XP_038881342.1	3.0e-64	90.28	class I heat shock protein-like [Benincasa hispida]	[more]
XP_004147911.1	4.3e-63	86.11	17.6 kDa class I heat shock protein 3 [Cucumis sativus] >KGN54322.1 hypothetical...	[more]
XP_022950131.1	7.4e-63	86.81	18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18...	[more]

BLAST of MS013973 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	2.5e-53	67.30	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P13853	2.7e-52	65.61	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P19036	3.9e-51	65.38	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]
O82012	2.0e-50	66.88	17.6 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P04794	3.3e-50	66.88	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]

BLAST of MS013973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DES4	3.8e-73	99.31	class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111019408 P...	[more]
A0A5A7TT84	1.3e-65	89.58	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BK89	1.3e-65	89.58	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772...	[more]
A0A0A0L154	2.1e-63	86.11	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 S...	[more]
A0A6J1GDY5	3.6e-63	86.81	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of MS013973 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	1.8e-54	67.30	heat shock protein 18.2	[more]
AT1G53540.1	1.9e-53	65.61	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	2.8e-52	65.38	heat shock protein 17.4	[more]
AT2G29500.1	1.9e-48	62.09	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.2e-48	61.78	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..144 e-value: 9.9E-47 score: 160.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 13..144
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 40..143 e-value: 4.6E-30 score: 103.8
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 30..144 score: 31.577419
None	No IPR available	PANTHER	PTHR11527:SF292	17.6 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..144
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 38..129 e-value: 2.93637E-47 score: 146.296
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013973.1	MS013973.1	mRNA