MS013898 (gene) Bitter gourd (TR) v1

Overview


Name	MS013898
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Dehydration-responsive element-binding protein 2A
Location	scaffold607: 714960 .. 716030 (+)
RNA-Seq Expression	MS013898
Synteny	MS013898

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACGAATCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCCTTGATCCAGCGCTTCTCCTCCACCGCCGGCGCCGTCGACGGCCTCCTCTTCGGCCATGTCTCCGAAATTACACCCTTGTCGCTCTCCGATGACTCATCCTCCTCTACCAACATCGAACCATCGGTACGCGTCGCCACCGTCACCGGATTTCTCTGCTCCGGCACCACCAATAGCTTCTACGATTCTTCTGGGCAAGTTGATTCCCAATCCCTAAACCGCCTTCTCAGCCACCACGCCGACGGCCACGCTCAAACCCACGACTCTTTGATTGGATGGTTTTCCGGCCGCCGGAGAACTCAGCTTCGGCCTTCCATGCGTGAATTCTTAGTGAGTCTCTCTTTGTCTTCGATGAAGCAATTGTCGATTCCTGTCAAAGACGCTGTGAATCCCACCAATCTAACCCCTAGTGTGTTTCTGCTTCTCACTTCGCCGCAATCCGATCGAATTATCCACACCCACGAGTACCGCGCTTTCCAATTTCGGCCCTCCAATGAGTTGTTTGAGGCGAAATCGATCGACATTGTGAACATTGGGCCGGCATTTCGTGGTCACTACGGGTCGTTTACCCCCAATTCCCCTTTCCCCCATTTGGTCTGCGAGATGAGGGTTTCTCCGATGAATGAGGATAAGAACGATGAGAATTTGAATCTGATAAAGCAGAACTCGAAGGATCAGAAGCAACTGAATATGTGCGCCGAAGGGTTTGAGGTTGGGAGCTTGACCCGGTTACTGGGTTCGGAGGCAGCAAATTATACTGCTGGGTTGGAGGATTTATACGAAAAGATGCTTGCCAAGGTCGAGAACTTGGCCCGGCTCGTCGAGAAGAGCTCCACCCAAGTCCTTGAGCAGGTATTCAATCACTTCTAAATGAATAAACTGTTCTCTTGTTTGCCACTGCTCAATGCTCCTCTTGATTGTTCAAGCTCTGCTAGATCTTATATATCATTCTGAACCTTTTTTCAGGAAAATCACAACAGGAAGTTAAAATACAAAGTTGCTAGATGCCCTGGATTTGAG

mRNA sequence

ATGGAAGACGAATCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCCTTGATCCAGCGCTTCTCCTCCACCGCCGGCGCCGTCGACGGCCTCCTCTTCGGCCATGTCTCCGAAATTACACCCTTGTCGCTCTCCGATGACTCATCCTCCTCTACCAACATCGAACCATCGGTACGCGTCGCCACCGTCACCGGATTTCTCTGCTCCGGCACCACCAATAGCTTCTACGATTCTTCTGGGCAAGTTGATTCCCAATCCCTAAACCGCCTTCTCAGCCACCACGCCGACGGCCACGCTCAAACCCACGACTCTTTGATTGGATGGTTTTCCGGCCGCCGGAGAACTCAGCTTCGGCCTTCCATGCGTGAATTCTTAGTGAGTCTCTCTTTGTCTTCGATGAAGCAATTGTCGATTCCTGTCAAAGACGCTGTGAATCCCACCAATCTAACCCCTAGTGTGTTTCTGCTTCTCACTTCGCCGCAATCCGATCGAATTATCCACACCCACGAGTACCGCGCTTTCCAATTTCGGCCCTCCAATGAGTTGTTTGAGGCGAAATCGATCGACATTGTGAACATTGGGCCGGCATTTCGTGGTCACTACGGGTCGTTTACCCCCAATTCCCCTTTCCCCCATTTGGTCTGCGAGATGAGGGTTTCTCCGATGAATGAGGATAAGAACGATGAGAATTTGAATCTGATAAAGCAGAACTCGAAGGATCAGAAGCAACTGAATATGTGCGCCGAAGGGTTTGAGGTTGGGAGCTTGACCCGGTTACTGGGTTCGGAGGCAGCAAATTATACTGCTGGGTTGGAGGATTTATACGAAAAGATGCTTGCCAAGGTCGAGAACTTGGCCCGGCTCGTCGAGAAGAGCTCCACCCAAGTCCTTGAGCAGGAAAATCACAACAGGAAGTTAAAATACAAAGTTGCTAGATGCCCTGGATTTGAG

Coding sequence (CDS)

ATGGAAGACGAATCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCCTTGATCCAGCGCTTCTCCTCCACCGCCGGCGCCGTCGACGGCCTCCTCTTCGGCCATGTCTCCGAAATTACACCCTTGTCGCTCTCCGATGACTCATCCTCCTCTACCAACATCGAACCATCGGTACGCGTCGCCACCGTCACCGGATTTCTCTGCTCCGGCACCACCAATAGCTTCTACGATTCTTCTGGGCAAGTTGATTCCCAATCCCTAAACCGCCTTCTCAGCCACCACGCCGACGGCCACGCTCAAACCCACGACTCTTTGATTGGATGGTTTTCCGGCCGCCGGAGAACTCAGCTTCGGCCTTCCATGCGTGAATTCTTAGTGAGTCTCTCTTTGTCTTCGATGAAGCAATTGTCGATTCCTGTCAAAGACGCTGTGAATCCCACCAATCTAACCCCTAGTGTGTTTCTGCTTCTCACTTCGCCGCAATCCGATCGAATTATCCACACCCACGAGTACCGCGCTTTCCAATTTCGGCCCTCCAATGAGTTGTTTGAGGCGAAATCGATCGACATTGTGAACATTGGGCCGGCATTTCGTGGTCACTACGGGTCGTTTACCCCCAATTCCCCTTTCCCCCATTTGGTCTGCGAGATGAGGGTTTCTCCGATGAATGAGGATAAGAACGATGAGAATTTGAATCTGATAAAGCAGAACTCGAAGGATCAGAAGCAACTGAATATGTGCGCCGAAGGGTTTGAGGTTGGGAGCTTGACCCGGTTACTGGGTTCGGAGGCAGCAAATTATACTGCTGGGTTGGAGGATTTATACGAAAAGATGCTTGCCAAGGTCGAGAACTTGGCCCGGCTCGTCGAGAAGAGCTCCACCCAAGTCCTTGAGCAGGAAAATCACAACAGGAAGTTAAAATACAAAGTTGCTAGATGCCCTGGATTTGAG

Protein sequence

MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSVRVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLRPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRPSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQNSKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLEQENHNRKLKYKVARCPGFE

Homology

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BLAST of MS013898 vs. NCBI nr
Match: XP_022144091.1 (uncharacterized protein LOC111013869 [Momordica charantia] >XP_022144092.1 uncharacterized protein LOC111013869 [Momordica charantia])

HSP 1 Score: 618.6 bits (1594), Expect = 3.0e-173
Identity = 317/319 (99.37%), Postives = 318/319 (99.69%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV
Sbjct: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLR 120
           RVATVT FLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLR
Sbjct: 61  RVATVTRFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLR 120

Query: 121 PSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRP 180
           PSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRP
Sbjct: 121 PSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRP 180

Query: 181 SNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQNS 240
           SNELFEAKSIDIVNIGPAFRGHYGSFTP+SPFPHLVCEMRVSPMNEDKNDENLNLIKQNS
Sbjct: 181 SNELFEAKSIDIVNIGPAFRGHYGSFTPDSPFPHLVCEMRVSPMNEDKNDENLNLIKQNS 240

Query: 241 KDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLE 300
           KDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLE
Sbjct: 241 KDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLE 300

Query: 301 QENHNRKLKYKVARCPGFE 320
           QENHNRKLKYKVARCPGFE
Sbjct: 301 QENHNRKLKYKVARCPGFE 319

[Close]

BLAST of MS013898 vs. NCBI nr
Match: TYK10947.1 (Dehydration-responsive element-binding protein 2A [Cucumis melo var. makuwa])

HSP 1 Score: 538.9 bits (1387), Expect = 3.0e-149
Identity = 274/320 (85.62%), Postives = 296/320 (92.50%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SLQKVAISGPILASLIQRFSS++GAVDGLLFGHVS++T LSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQTHDSLIGWFSGRRRTQL 120
           RVATVTGFLCSGTTNSFYDS G+VDSQSLNRLL  H +DG AQ HDS +GWFSGRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFR 180
           RPSMRE+LVS SLSSMKQLS PVKDAVNPTN  PSVFLLLTSP SD+IIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 PSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQN 240
            SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL CEMR SPMNEDKND+NLN++KQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVL 300
           SKDQKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E LARLVE+SS QVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLKYKVARCPGFE 320
           EQENHNRKL+YKVAR PGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]

BLAST of MS013898 vs. NCBI nr
Match: XP_004148597.1 (uncharacterized protein LOC101208097 [Cucumis sativus] >KGN54413.1 hypothetical protein Csa_021559 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 3.0e-149
Identity = 275/322 (85.40%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SLQKVAISGPILASLIQRFSS++GAVDGLLFGHVS++TPLSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQT--HDSLIGWFSGRRRT 120
           RVATVTGFLCSG+TNSFYDS G+VDSQSLNRLL  H +DG AQ   HDSL+GWFSGRRRT
Sbjct: 61  RVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFSGRRRT 120

Query: 121 QLRPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQ 180
           QLRPSMRE+LVS SLSSMKQLS PVKDAVNPTNL PSVFLLLTSP SD+IIHTHEYRAFQ
Sbjct: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPLSDQIIHTHEYRAFQ 180

Query: 181 FRPSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIK 240
           FR SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL+CEMR SPMNEDKND+NLN++K
Sbjct: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRASPMNEDKNDDNLNMMK 240

Query: 241 QNSKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQ 300
           QNSK QKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E+LARLVE+SS Q
Sbjct: 241 QNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEESSAQ 300

Query: 301 VLEQENHNRKLKYKVARCPGFE 320
           VLEQENHNRKL+YKVAR PGFE
Sbjct: 301 VLEQENHNRKLRYKVARYPGFE 322

[Close]

BLAST of MS013898 vs. NCBI nr
Match: XP_008464233.1 (PREDICTED: uncharacterized protein LOC103502164 [Cucumis melo] >XP_016903165.1 PREDICTED: uncharacterized protein LOC103502164 [Cucumis melo] >KAA0037714.1 Dehydration-responsive element-binding protein 2A [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 273/320 (85.31%), Postives = 295/320 (92.19%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SL KVAISGPILASLIQRFSS++GAVDGLLFGHVS++T LSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLHKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQTHDSLIGWFSGRRRTQL 120
           RVATVTGFLCSGTTNSFYDS G+VDSQSLNRLL  H +DG AQ HDS +GWFSGRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFR 180
           RPSMRE+LVS SLSSMKQLS PVKDAVNPTN  PSVFLLLTSP SD+IIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 PSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQN 240
            SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL CEMR SPMNEDKND+NLN++KQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVL 300
           SKDQKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E LARLVE+SS QVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLKYKVARCPGFE 320
           EQENHNRKL+YKVAR PGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]

BLAST of MS013898 vs. NCBI nr
Match: XP_038883443.1 (uncharacterized protein LOC120074401 [Benincasa hispida] >XP_038883444.1 uncharacterized protein LOC120074401 [Benincasa hispida])

HSP 1 Score: 533.1 bits (1372), Expect = 1.6e-147
Identity = 274/320 (85.62%), Postives = 292/320 (91.25%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SLQKVAISGPILASLIQRFSS++GAVDGLLFGHVS++TPLSLSDDSSSSTN EPS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTNTEPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQTHDSLIGWFSGRRRTQL 120
           RVATVTGFLCSGTTNSFYDS G+V+SQSLNRLL  H  DG AQ HDSL+GWF+GRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVNSQSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120

Query: 121 RPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFR 180
           RPSMRE+LVS SL SMK  S PVKDA  PTN+ PSVFLLLTSP SD+IIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLPSMKPFSFPVKDA--PTNIIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 PSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQN 240
            SNE FE KSIDIVNIGPAFRGHYGSFTPNSP PHL+CEMR SPMNEDKNDENLNL+KQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPLPHLLCEMRASPMNEDKNDENLNLMKQN 240

Query: 241 SKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVL 300
           SKDQKQ+NMCAEGFEVG+LTRLLGSEAANYTAGLEDLYEKMLAK E LARLVEKSS QVL
Sbjct: 241 SKDQKQMNMCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEKSSAQVL 300

Query: 301 EQENHNRKLKYKVARCPGFE 320
           EQENHNRKL+YKV R PG E
Sbjct: 301 EQENHNRKLRYKVVRSPGSE 318

[Close]

BLAST of MS013898 vs. ExPASy TrEMBL
Match: A0A6J1CSA3 (uncharacterized protein LOC111013869 OS=Momordica charantia OX=3673 GN=LOC111013869 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.4e-173
Identity = 317/319 (99.37%), Postives = 318/319 (99.69%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV
Sbjct: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLR 120
           RVATVT FLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLR
Sbjct: 61  RVATVTRFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRTQLR 120

Query: 121 PSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRP 180
           PSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRP
Sbjct: 121 PSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFRP 180

Query: 181 SNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQNS 240
           SNELFEAKSIDIVNIGPAFRGHYGSFTP+SPFPHLVCEMRVSPMNEDKNDENLNLIKQNS
Sbjct: 181 SNELFEAKSIDIVNIGPAFRGHYGSFTPDSPFPHLVCEMRVSPMNEDKNDENLNLIKQNS 240

Query: 241 KDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLE 300
           KDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLE
Sbjct: 241 KDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVLE 300

Query: 301 QENHNRKLKYKVARCPGFE 320
           QENHNRKLKYKVARCPGFE
Sbjct: 301 QENHNRKLKYKVARCPGFE 319

[Close]

BLAST of MS013898 vs. ExPASy TrEMBL
Match: A0A5D3CG44 (Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00300 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 274/320 (85.62%), Postives = 296/320 (92.50%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SLQKVAISGPILASLIQRFSS++GAVDGLLFGHVS++T LSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQTHDSLIGWFSGRRRTQL 120
           RVATVTGFLCSGTTNSFYDS G+VDSQSLNRLL  H +DG AQ HDS +GWFSGRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFR 180
           RPSMRE+LVS SLSSMKQLS PVKDAVNPTN  PSVFLLLTSP SD+IIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 PSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQN 240
            SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL CEMR SPMNEDKND+NLN++KQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVL 300
           SKDQKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E LARLVE+SS QVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLKYKVARCPGFE 320
           EQENHNRKL+YKVAR PGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]

BLAST of MS013898 vs. ExPASy TrEMBL
Match: A0A0A0KY28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314410 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 275/322 (85.40%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SLQKVAISGPILASLIQRFSS++GAVDGLLFGHVS++TPLSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQT--HDSLIGWFSGRRRT 120
           RVATVTGFLCSG+TNSFYDS G+VDSQSLNRLL  H +DG AQ   HDSL+GWFSGRRRT
Sbjct: 61  RVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFSGRRRT 120

Query: 121 QLRPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQ 180
           QLRPSMRE+LVS SLSSMKQLS PVKDAVNPTNL PSVFLLLTSP SD+IIHTHEYRAFQ
Sbjct: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPLSDQIIHTHEYRAFQ 180

Query: 181 FRPSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIK 240
           FR SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL+CEMR SPMNEDKND+NLN++K
Sbjct: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRASPMNEDKNDDNLNMMK 240

Query: 241 QNSKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQ 300
           QNSK QKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E+LARLVE+SS Q
Sbjct: 241 QNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEESSAQ 300

Query: 301 VLEQENHNRKLKYKVARCPGFE 320
           VLEQENHNRKL+YKVAR PGFE
Sbjct: 301 VLEQENHNRKLRYKVARYPGFE 322

[Close]

BLAST of MS013898 vs. ExPASy TrEMBL
Match: A0A1S3CLG7 (uncharacterized protein LOC103502164 OS=Cucumis melo OX=3656 GN=LOC103502164 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.5e-149
Identity = 273/320 (85.31%), Postives = 295/320 (92.19%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SL KVAISGPILASLIQRFSS++GAVDGLLFGHVS++T LSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLHKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQTHDSLIGWFSGRRRTQL 120
           RVATVTGFLCSGTTNSFYDS G+VDSQSLNRLL  H +DG AQ HDS +GWFSGRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFR 180
           RPSMRE+LVS SLSSMKQLS PVKDAVNPTN  PSVFLLLTSP SD+IIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 PSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQN 240
            SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL CEMR SPMNEDKND+NLN++KQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVL 300
           SKDQKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E LARLVE+SS QVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLKYKVARCPGFE 320
           EQENHNRKL+YKVAR PGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]

BLAST of MS013898 vs. ExPASy TrEMBL
Match: A0A5A7T2L9 (Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00050 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.5e-149
Identity = 273/320 (85.31%), Postives = 295/320 (92.19%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSSSSTNIEPSV 60
           MED+SL KVAISGPILASLIQRFSS++GAVDGLLFGHVS++T LSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLHKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLS-HHADGHAQTHDSLIGWFSGRRRTQL 120
           RVATVTGFLCSGTTNSFYDS G+VDSQSLNRLL  H +DG AQ HDS +GWFSGRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREFLVSLSLSSMKQLSIPVKDAVNPTNLTPSVFLLLTSPQSDRIIHTHEYRAFQFR 180
           RPSMRE+LVS SLSSMKQLS PVKDAVNPTN  PSVFLLLTSP SD+IIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 PSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNLIKQN 240
            SNE FE KSIDIVNIGPAFRGHYGSF PNSPFPHL CEMR SPMNEDKND+NLN++KQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSSTQVL 300
           SKDQKQ+N+CAEGF+VG+LTRLLGSEAANYTAGLEDLYEKMLAK E LARLVE+SS QVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLKYKVARCPGFE 320
           EQENHNRKL+YKVAR PGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]

BLAST of MS013898 vs. TAIR 10
Match: AT3G08780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 129 Blast hits to 129 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 320.1 bits (819), Expect = 2.0e-87
Identity = 174/319 (54.55%), Postives = 228/319 (71.47%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSS---SSTNIE 60
           M+D SL+K+ ISGP LASLIQR SS+   VDGL+FG +  I   +LSDDS    +S++  
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDDSPADIASSSSS 60

Query: 61  PSVRVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRT 120
               VATVT F+CSG T SFYD  G+VDS+ ++ L          + D LIGWFS RR+T
Sbjct: 61  SDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSL-------RVDSPDHLIGWFSARRKT 120

Query: 121 QLRPSMREFLVSLSLSSMKQLSIPVKDAVNP--TNLTPSVFLLLTSPQSDRIIHTHEYRA 180
             RPSMRE  V+ SLSS  Q  +P++D  NP   N+  SVF LLT P +D+ IHTHEYRA
Sbjct: 121 ANRPSMRELAVTSSLSS--QFHLPIEDLQNPRSMNMASSVFFLLTMPLTDQCIHTHEYRA 180

Query: 181 FQFRPSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNL 240
           +QFR S +  E +S+ IVNIGPAFRGHYGSF+P S FP L+CE+  S M+ D ++ +L+ 
Sbjct: 181 YQFRSSKQRLEPRSVGIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDESSLSA 240

Query: 241 IKQNSKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSS 300
            KQ++KDQK+++  AEGF+VG L RL+G+EAANYT G+E++YE+MLAK+E+LA  VEKSS
Sbjct: 241 KKQSAKDQKEIDALAEGFQVGELKRLVGAEAANYTGGIEEMYERMLAKIESLASDVEKSS 300

Query: 301 TQVLEQENHNRKLKYKVAR 315
            +V +QE HNRKL+ +VAR
Sbjct: 301 ARVFQQEKHNRKLRNRVAR 310

[Close]

BLAST of MS013898 vs. TAIR 10
Match: AT3G08780.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 303.9 bits (777), Expect = 1.5e-82
Identity = 167/310 (53.87%), Postives = 220/310 (70.97%), Query Frame = 0


Query: 1   MEDESLQKVAISGPILASLIQRFSSTAGAVDGLLFGHVSEITPLSLSDDSS---SSTNIE 60
           M+D SL+K+ ISGP LASLIQR SS+   VDGL+FG +  I   +LSDDS    +S++  
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDDSPADIASSSSS 60

Query: 61  PSVRVATVTGFLCSGTTNSFYDSSGQVDSQSLNRLLSHHADGHAQTHDSLIGWFSGRRRT 120
               VATVT F+CSG T SFYD  G+VDS+ ++ L          + D LIGWFS RR+T
Sbjct: 61  SDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSL-------RVDSPDHLIGWFSARRKT 120

Query: 121 QLRPSMREFLVSLSLSSMKQLSIPVKDAVNP--TNLTPSVFLLLTSPQSDRIIHTHEYRA 180
             RPSMRE  V+ SLSS  Q  +P++D  NP   N+  SVF LLT P +D+ IHTHEYRA
Sbjct: 121 ANRPSMRELAVTSSLSS--QFHLPIEDLQNPRSMNMASSVFFLLTMPLTDQCIHTHEYRA 180

Query: 181 FQFRPSNELFEAKSIDIVNIGPAFRGHYGSFTPNSPFPHLVCEMRVSPMNEDKNDENLNL 240
           +QFR S +  E +S+ IVNIGPAFRGHYGSF+P S FP L+CE+  S M+ D ++ +L+ 
Sbjct: 181 YQFRSSKQRLEPRSVGIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDESSLSA 240

Query: 241 IKQNSKDQKQLNMCAEGFEVGSLTRLLGSEAANYTAGLEDLYEKMLAKVENLARLVEKSS 300
            KQ++KDQK+++  AEGF+VG L RL+G+EAANYT G+E++YE+MLAK+E+LA  VEKSS
Sbjct: 241 KKQSAKDQKEIDALAEGFQVGELKRLVGAEAANYTGGIEEMYERMLAKIESLASDVEKSS 300

Query: 301 TQVLEQ-ENH 305
            +V +Q +NH
Sbjct: 301 ARVFQQVQNH 301

The following BLAST results are available for this feature:

BLAST of MS013898 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144091.1	3.0e-173	99.37	uncharacterized protein LOC111013869 [Momordica charantia] >XP_022144092.1 uncha...	[more]
TYK10947.1	3.0e-149	85.63	Dehydration-responsive element-binding protein 2A [Cucumis melo var. makuwa]	[more]
XP_004148597.1	3.0e-149	85.40	uncharacterized protein LOC101208097 [Cucumis sativus] >KGN54413.1 hypothetical ...	[more]
XP_008464233.1	1.1e-148	85.31	PREDICTED: uncharacterized protein LOC103502164 [Cucumis melo] >XP_016903165.1 P...	[more]
XP_038883443.1	1.6e-147	85.63	uncharacterized protein LOC120074401 [Benincasa hispida] >XP_038883444.1 unchara...	[more]

BLAST of MS013898 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS013898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSA3	1.4e-173	99.37	uncharacterized protein LOC111013869 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5D3CG44	1.4e-149	85.63	Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX...	[more]
A0A0A0KY28	1.4e-149	85.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314410 PE=4 SV=1	[more]
A0A1S3CLG7	5.5e-149	85.31	uncharacterized protein LOC103502164 OS=Cucumis melo OX=3656 GN=LOC103502164 PE=...	[more]
A0A5A7T2L9	5.5e-149	85.31	Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX...	[more]

BLAST of MS013898 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08780.1	2.0e-87	54.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G08780.2	1.5e-82	53.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023238	FAM175 family	PRINTS	PR02051	PROTEINF175	coord: 11..29 score: 33.58 coord: 76..95 score: 45.24 coord: 109..125 score: 51.26 coord: 31..48 score: 39.42 coord: 189..203 score: 40.63
IPR023238	FAM175 family	PANTHER	PTHR31728	ABRAXAS FAMILY MEMBER	coord: 1..313
IPR023241	FAM175 family, plant	PRINTS	PR02054	FAM175PLANT	coord: 46..70 score: 36.0 coord: 160..180 score: 66.67 coord: 274..300 score: 59.26 coord: 1..21 score: 68.18 coord: 225..245 score: 38.1 coord: 197..217 score: 76.19 coord: 251..271 score: 71.43
None	No IPR available	PANTHER	PTHR31728:SF5	OS07G0540200 PROTEIN	coord: 1..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013898.1	MS013898.1	mRNA