MS013896 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTGCTTGAACATCTCAACCAACGTCAATCTCGACGCCGTCGACATCTCCTCCCTACACTCCGACGCCACCGCCACCGTCGCCGCCCTCCTCCGGCGCCCCGAGGCGGTACACTCCCCGATCTTCTCCTTCTTCTTCTTCACCACGACTCTGCTCTTACATCTTTTACGATTTTGCCCTAATTTTATGTTGTCGTTTCTCTAATTCTACAGCACGTCATGGTTGTTCTCAAGGGATCCGTTTCGATTACATTCGGCGGCAGCGCCGATCCTGCCGCACACGCCGAATTGATGTCCGTCGGCGGTTTTAGTCCCGATGTTAACCAACGCCTCTCCGCTGCCATTGCCGCCATTCTTGAAGCCAAGCTTTCCGTTCCTAAACACAGATTCATCCTCAAATTTTACGACGTCAAG ATGCCCTGCTTGAACATCTCAACCAACGTCAATCTCGACGCCGTCGACATCTCCTCCCTACACTCCGACGCCACCGCCACCGTCGCCGCCCTCCTCCGGCGCCCCGAGGCGCACGTCATGGTTGTTCTCAAGGGATCCGTTTCGATTACATTCGGCGGCAGCGCCGATCCTGCCGCACACGCCGAATTGATGTCCGTCGGCGGTTTTAGTCCCGATGTTAACCAACGCCTCTCCGCTGCCATTGCCGCCATTCTTGAAGCCAAGCTTTCCGTTCCTAAACACAGATTCATCCTCAAATTTTACGACGTCAAG ATGCCCTGCTTGAACATCTCAACCAACGTCAATCTCGACGCCGTCGACATCTCCTCCCTACACTCCGACGCCACCGCCACCGTCGCCGCCCTCCTCCGGCGCCCCGAGGCGCACGTCATGGTTGTTCTCAAGGGATCCGTTTCGATTACATTCGGCGGCAGCGCCGATCCTGCCGCACACGCCGAATTGATGTCCGTCGGCGGTTTTAGTCCCGATGTTAACCAACGCCTCTCCGCTGCCATTGCCGCCATTCTTGAAGCCAAGCTTTCCGTTCCTAAACACAGATTCATCCTCAAATTTTACGACGTCAAG MPCLNISTNVNLDAVDISSLHSDATATVAALLRRPEAHVMVVLKGSVSITFGGSADPAAHAELMSVGGFSPDVNQRLSAAIAAILEAKLSVPKHRFILKFYDVK Homology
BLAST of MS013896 vs. NCBI nr
Match: XP_022144076.1 (macrophage migration inhibitory factor homolog [Momordica charantia]) HSP 1 Score: 196.8 bits (499), Expect = 9.1e-47 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of MS013896 vs. NCBI nr
Match: XP_014492467.1 (macrophage migration inhibitory factor homolog isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 147.5 bits (371), Expect = 6.3e-32 Identity = 72/104 (69.23%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS013896 vs. NCBI nr
Match: XP_014492468.1 (macrophage migration inhibitory factor homolog isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 147.5 bits (371), Expect = 6.3e-32 Identity = 72/104 (69.23%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS013896 vs. NCBI nr
Match: AFK37368.1 (unknown [Lotus japonicus]) HSP 1 Score: 147.5 bits (371), Expect = 6.3e-32 Identity = 72/104 (69.23%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of MS013896 vs. NCBI nr
Match: XP_028957148.1 (macrophage migration inhibitory factor homolog isoform X1 [Malus domestica]) HSP 1 Score: 147.1 bits (370), Expect = 8.3e-32 Identity = 73/104 (70.19%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of MS013896 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 4.6e-09 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of MS013896 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4) HSP 1 Score: 61.2 bits (147), Expect = 7.8e-09 Identity = 34/104 (32.69%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of MS013896 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 7.8e-09 Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of MS013896 vs. ExPASy Swiss-Prot
Match: Q02960 (Macrophage migration inhibitory factor OS=Gallus gallus OX=9031 GN=MIF PE=3 SV=3) HSP 1 Score: 46.6 bits (109), Expect = 2.0e-04 Identity = 30/103 (29.13%), Postives = 48/103 (46.60%), Query Frame = 0
BLAST of MS013896 vs. ExPASy Swiss-Prot
Match: O55052 (Macrophage migration inhibitory factor OS=Meriones unguiculatus OX=10047 GN=MIF PE=3 SV=3) HSP 1 Score: 45.1 bits (105), Expect = 5.8e-04 Identity = 29/103 (28.16%), Postives = 49/103 (47.57%), Query Frame = 0
BLAST of MS013896 vs. ExPASy TrEMBL
Match: A0A6J1CS88 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111013854 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of MS013896 vs. ExPASy TrEMBL
Match: A0A1S3TFC2 (macrophage migration inhibitory factor homolog isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106754911 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.1e-32 Identity = 72/104 (69.23%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS013896 vs. ExPASy TrEMBL
Match: A0A1S3TFF2 (macrophage migration inhibitory factor homolog isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106754911 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.1e-32 Identity = 72/104 (69.23%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS013896 vs. ExPASy TrEMBL
Match: I3SAS6 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.1e-32 Identity = 72/104 (69.23%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of MS013896 vs. ExPASy TrEMBL
Match: V7B5R8 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G092500g PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 4.0e-32 Identity = 71/104 (68.27%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MS013896 vs. TAIR 10
Match: AT5G01650.1 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 140.6 bits (353), Expect = 7.2e-34 Identity = 68/104 (65.38%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of MS013896 vs. TAIR 10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 140.6 bits (353), Expect = 7.2e-34 Identity = 68/104 (65.38%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of MS013896 vs. TAIR 10
Match: AT5G57170.1 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 0
BLAST of MS013896 vs. TAIR 10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 0
BLAST of MS013896 vs. TAIR 10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20 Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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