
MS013879 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCGAGGGAGCGAAAGAAAGCAGCAGCTTCTTCTCAGAATCATAAGTCCAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTACTTTTCTCATCATTCAATTATTCAATTTCAAACTCACTTTCTTCTCCAAATTTAATCTTTGAAAAATCGATCAAATCGAGTTTGATTTTGCCTGCGCCTAAAATAGGGTTGTTCAAGGTCAGGGACGGAGAAGCTTCATCCCTGCAAAATTATCCACAAAAGGGATTGAGGCGGAGAATTCACGAGGATTGGGTTCTCGTGAATAATTTTTTCCGTTTATTGTTTTTAAACTTATTTCTCAATTAAATATTTTTTCTAAACAAATTTCTAACCATAAAACCCATGGAAGGGGTGATATTGTAGATATATAAAGAGTAATTAATCTGATTAATATTTATTGTTTTTTCTATGATTTATTTCTCAATTAAATAATTTTCTTCTCTTTAATCATAAAACCTCGTCGGATGGATGATGCAAAAAGAACACAATTTTTTTTAATATGTATATAGAGAATAATTAATATGATTGTTTTATTGTGTGTATTAACTTAAGGTGAGGTGGGGAGGGTCCGTCCTGGGGGATCTAAATCGAGAATTTTCGCTCCATTTAGACATATTCCTGTATAGAAAATGGACATCCCTAATTTGAAATCATATGATATCAATTCAATGGATTTTCATTTAGACATATTTTTCTTTTTTTTTTTCCTTTCATTTTGGGTGGTTGAATTTTGAAGTTATTGAGATGCAGGAGGTGAATGTGGAGAGCGTAGAGAGGGGTTTTGTGATAAATGTGTATTTGGAGAGGAATTCACCGGGATTGCTGGTTCGGATTCTAGAAGTTTTTGAGAAATTGGGCCTCGAAGTCCTCGACGCCACCGTGTCGTGCTCCGATTCGTTTCAACTCCAAGCTGTTGGGGAAGAGGTCACCTCTCTCTTTACTTTTTCAACTTGGTTAATTCCAACACTCAACTTTCAATTTTTGTGTCTAATTCGTCTTTTAACTTTAAAAAGTTTAGTTAACTTTTAGACGTTAAACATAGTTTTTGTAGTTGTTATGGTAGTTTTGTAGATACATCAGTGATTTATTAGATATTTTTTTAAAATTTAGAGACTTAGCTATGGTAGTTAAAATTAAAAGACATCCTTTTTCAAAATTTATAACCAATCAAATACATTCAAAAAATTTAAGTACTAAATTTATGAGGGAAAACTCTCATATGAATTTTTCTATCTTTATGGTAAGATAAATTCACAACAATTATGATGGAGGATATTCCTCTAATTCGTACTCTCCAAATAGTCTGTTTATAATGTTATTAACACGGCGTGAAAATGATTTGTTTTTATTTTATTTTTGAAATTGCAGCTAAATTTTAAAATAAATAAAGTTAGTTTCTCAAACTAAATTCTCTTATTAATGAAAAAAAGAAAAAAAAAAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAACCAATTTTCTGTTTTTTAACATTGACTAGAGTACATTCCAAAAGTAATTTTGAAAAAAAGGTAAAAATAAGTGTAAATAACTCATAATGTGTCAAAATCTTGATTGTTGTTATAATGAAAGATGGTGAAAACTGAATTATTTGGGTGGTGTTTTGAACAGAACGAAGGCACCAAAATCATAAAGCCCCAAGTGGTGAAAAAGGCAGTAAAACAAGCAATCAAGGAATGGAGTGAAAGTGAAAGTAATGGGCAGGCA ATGGGTTCGAGGGAGCGAAAGAAAGCAGCAGCTTCTTCTCAGAATCATAAGTCCAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGAGGTGAATGTGGAGAGCGTAGAGAGGGGTTTTGTGATAAATGTGTATTTGGAGAGGAATTCACCGGGATTGCTGGTTCGGATTCTAGAAGTTTTTGAGAAATTGGGCCTCGAAGTCCTCGACGCCACCGTGTCGTGCTCCGATTCGTTTCAACTCCAAGCTGTTGGGGAAGAGAACGAAGGCACCAAAATCATAAAGCCCCAAGTGGTGAAAAAGGCAGTAAAACAAGCAATCAAGGAATGGAGTGAAAGTGAAAGTAATGGGCAGGCA ATGGGTTCGAGGGAGCGAAAGAAAGCAGCAGCTTCTTCTCAGAATCATAAGTCCAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGAGGTGAATGTGGAGAGCGTAGAGAGGGGTTTTGTGATAAATGTGTATTTGGAGAGGAATTCACCGGGATTGCTGGTTCGGATTCTAGAAGTTTTTGAGAAATTGGGCCTCGAAGTCCTCGACGCCACCGTGTCGTGCTCCGATTCGTTTCAACTCCAAGCTGTTGGGGAAGAGAACGAAGGCACCAAAATCATAAAGCCCCAAGTGGTGAAAAAGGCAGTAAAACAAGCAATCAAGGAATGGAGTGAAAGTGAAAGTAATGGGCAGGCA MGSRERKKAAASSQNHKSKEFRASTSSSAEVNVESVERGFVINVYLERNSPGLLVRILEVFEKLGLEVLDATVSCSDSFQLQAVGEENEGTKIIKPQVVKKAVKQAIKEWSESESNGQA Homology
BLAST of MS013879 vs. NCBI nr
Match: XP_022144010.1 (uncharacterized protein LOC111013797 [Momordica charantia]) HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of MS013879 vs. NCBI nr
Match: XP_038882922.1 (uncharacterized protein LOC120074022 [Benincasa hispida]) HSP 1 Score: 185.3 bits (469), Expect = 3.1e-43 Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS013879 vs. NCBI nr
Match: XP_022977370.1 (uncharacterized protein LOC111477723 [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 3.5e-42 Identity = 105/120 (87.50%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of MS013879 vs. NCBI nr
Match: XP_022950375.1 (uncharacterized protein LOC111453491 [Cucurbita moschata]) HSP 1 Score: 180.6 bits (457), Expect = 7.7e-42 Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of MS013879 vs. NCBI nr
Match: XP_008464258.1 (PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]) HSP 1 Score: 174.9 bits (442), Expect = 4.2e-40 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of MS013879 vs. ExPASy TrEMBL
Match: A0A6J1CQF9 (uncharacterized protein LOC111013797 OS=Momordica charantia OX=3673 GN=LOC111013797 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of MS013879 vs. ExPASy TrEMBL
Match: A0A6J1IM47 (uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.7e-42 Identity = 105/120 (87.50%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of MS013879 vs. ExPASy TrEMBL
Match: A0A6J1GFJ5 (uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC111453491 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.7e-42 Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of MS013879 vs. ExPASy TrEMBL
Match: A0A1S3CLI8 (uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of MS013879 vs. ExPASy TrEMBL
Match: A0A0A0L039 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39 Identity = 96/117 (82.05%), Postives = 103/117 (88.03%), Query Frame = 0
BLAST of MS013879 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17 Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of MS013879 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators ) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-15 Identity = 44/112 (39.29%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of MS013879 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 3.1e-04 Identity = 28/83 (33.73%), Postives = 41/83 (49.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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