MS013845 (gene) Bitter gourd (TR) v1

Overview


Name	MS013845
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	KH domain-containing protein
Location	scaffold607: 209731 .. 214593 (+)
RNA-Seq Expression	MS013845
Synteny	MS013845

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTCTGTACAGTACCAACTTCTCCCCTGCAAGAGCTGCCTCTCCTCACATCAGAAGTACTCCTGATGTCGATAGGTACTCCGCCTGATAATTCTGTTTTCGAGAATTTTTTCATCATCTTCTTCTTCTGCCTTGTTAATTGTTGGGTTTCTTCAGCTTGACTGAGTTGAATAATCAATCAATTCACTTCTGTTCTTGCCGTGTAATTTGTAGTCAGTACTTGTCGGAGCTACTGGCGGAGCATCAGAAGTTCGGTCCCTTCATGCAAGTTCTTCCGATCTGCAGCCGACTTTTGAATCAAGGTCTAGGAATCCTTCTCTCAATTTTGCCGTTTTGCACATTCTTTTTAGTGTTTTTTAGCTGCTTAATTGTTGTGGAGATATGTATGTCTGTATGTTTGGATCGGGATGGCCGGTGGATTTTTGTATTTCTCTTCAGTCTTTTACAGCGATCGCTCTCTTTGTTTTCCCTCGCCCTCTACTTTTGACTGTTGAATTGTGCATTTTTCAGTGATGGTTTCTTTCACATTCTATACGGTGGCCATGCTTGGTACTGTTTTTGGGTTTTTGATTAATGGTTGATCCTTCTTTTATATTTGTTTGTATCTGTTTACCTTGTGTAGAAGAAAGAAAAATGTGCGTTGGGGTTTACTTCTTATCTTTGTCCAATCTTTCAAGTCTTGCTTTTTCCCCCTCCATTTACTTAAAAAAGTAGAGATGGGTTGTTTTGTGTTTGTTATTTTGTTTTTTAATAAAAATATAAAAGTTTCACTTGAAAATGTCGTTGAAAAGGATATTTTTAGATATTATAGTGGGGTGTTTTCTTTTCTTATCCTATGGTTCATTTCTTTCACACTCTACACTTTCATTGATATTTTATAAAACTAAAAATAAGAAACCCGGATGAAGAAGTTCTAGTTTTCAATTCTTCATGGTTTGAATGTTGGAAATGTTTCTGAAAATGAGAAATGAGAGATAAAAAACATTATCAAATGCACATGCTTTTTAAAAATAGATGGCAAGCAATAGAAAGCATGGATTAGAGACATTATTAATCAAGCCCTTGGTCTCTTACTTCAAGTTAAAGTGCTTGAGCATGTGTTTGTTGGAAATCGTTGAGTCAATCTGAGTGACTTTCATCTTTTAATTAAGCAGACATGTGCATATTGGTTGATTTTGTTTTGACTTGTGGCGTTCTTGACTCGCTCTTCTAATTGGTTTTCTACTTAGCATGTCTAAGTTGAGTTTGCAAGTGTAGAGGGAAAAAAAAACCTTAGTTACTTCTGAAGGCTGATTAATTCTTCTAGCACATGAGATCCCAAATCTTATACATACCCATTATGGTGGATTTGTCTTCATAAATTTTAGAGATATATTTTCCTTTACAAAAAACCTCTACAAATGCACCACGCCATGAACCATTTTACCACTGAAAGATCAAAAGCCTTCTCATTAGTGGCAGATGTTCAAAGAAATCAAATTCACATGTTCCCAATCTATTATTTGTTGGTCACTTTATAAGACTTTGACCTTCCACATGAGAGTTCAAGGCTGCATATTGAATTTGGAAAAGCTTTGCAAGTGAAATGAAGGCTAGTATCTTCAGGTCATGGAGATATGCACTAGTTTTAAGATATCTATGTGGGGAATGAACTTTCGGAGATCTCCTTGGATTCTTTGGCTTGTTATAAATTATAATCATATAATGTTCCAAGGGTTAAGTTTCAACCTCCATTTAAATTGCCAAATACAATATTGATATCTCCATCTTGTTCTTAACAGTATGATTTCTTTGTTCTCCTTCCAAACTGATCTTGTTATAGAGTTCAGATTGTTTTGAAGTATCCTTAATTTCTGGTGTTCTCTGTAGATATTGTGCGAAGAAATTTCCATATCTTCCCTCTTTTCATATATTCTGCCTTTCGATTCTGTTGGCAACTTCTCTCACTTCTAGCTCTTTAAATGCAGAGATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTTGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTAGCTCAGGTCTGGGTGGCTGGAATGGACTTCCTCAGGAGGTAATTACTATTGTAGCATCAAAACTTCATTTGTAACTGGCTCCTGATAATTGTTGATCCCATCATTTTGAGTCTAACTTTACTATGTTTTGATATATGGGTTAACATATGCAATAATTATAACTTGATAATTTAAAGGTAACATTGTAATTCCTCTCTGAAGTAGCCTTATGGCTTGAGGGATTGGGGTCTGCAATAAATGTGGCAATGTGTCATTATTAGTAGCTTGAATTATTACCAAAGCTAGTTTGGTACCTTTTCCTTAAATGAATTTTTGGGATATAAGCATTGAGAGAAGAAGCAGGCTTAGAGGTAAAGGCATCTACTCCTTTCCTTGAGATTGGAGATTCAAGTTCTCACTCCCCCTCACACTACTTGTACTAGAAAAGTTTTTTTTTTTTTTTTTTTTTTAAAAAAAGAAGAAGCAGGCTTGACGTTGTCTTTGACTAAGTATTTGTTCTGGAATGGAATACATATCTCATAAATTGCTAGTTTTTTCTCCATTTTGTTCATCATTTATTTTTGCGTGTTTGTTTTCAATAAGGTAACTTCATGTTCCCCAATACATCCATGTGATAATCCTATTTAACTTATTAGCATCTCATTTGCCCTCATAAATGCTCGTGTTACTTCATTTAGAAACAAATATAGCTTTCATTTCCATTTCTACTATCTAATTTTCAACAACAGTATTGTTAACCTGAAAGATCTTGTGCCGTCTGGACGCCAAACCATGCAGCAGTATTGCTCATTAAGAGTGAAAGTTGCCTCGAACGTCGAGATCTTACTTTCTGAGTACTTTATTAACATGTAACTTCCAACCTAAAATCTTACTCCAATGACTTTCTTCAGAAAAGAGAAAGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAGAGAACTCCATTGAATTCCCCAAGTTTAGCTTGTGATAGTGCATATATTTCACTACTTTTCACTTGTGTGAATTGTCAAAAACTTCTTCACCATTCTTGACGATTATGTCTTAAACAGGTTGCCTTTGTTGGTCCTCCACTTTAAAATTCAATGAAAGCATCATCTATAAGATAAGACCAAACAGCACCTGTTTGGATGAAATGCAAAAAATAGAATAATATTTGTCAAATACGTATCTGCTGAAATATGTGTAACAAATATAGATAAACCCAATGTTTATTGCAAAAGTTGGCCTCTTACTGAAACATTATTCAACGTAATTACAAATTTACAAGAATACTTGAATACATTACAATAATTTCTTTCCAGATTATTTCTCTCATGTTCAATTCTTTCCTCTACGTTTGGGATCCCCTGATTGGTTATTTTATCATCGGATACTGATATATCTTGTGCTACCAGTCCTCTTGTATGCTTATATATAGAATTCTATCTATGTTAATTACTCTTCTGAACAGTTCTTCTTAGTTGTTAAGTTGTATTAAGATGATATAACCTTTTTGTAACATACAACAGAGATTAAGTAGACCCCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCGCTCACAGTAAAGAGGATTCTACGTTTGGAAATACCAGTGGATACTTACCCAAACGTAAGTTCTGTCAAAATAAAAGTTCTTTTATTTGCTGGTCGCACACTAGCTAGTAGGTCTAACCTGTACATGCACAAACATATTACTTAGTAAGAGGGTTAATATATTAATACTTGAAGTTTCTGTTCTTTGTGGATATCAGTTCAATTTTGTAGGGCGTCTTTTGGGACCTCGGGGTAATTCATTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTCTACATTCGAGGGAAAGGGTCGATAAAGGATCCCGACAAGGTAATATAAGGATATTGCAATTTTTTATTCAATGTACGTCATTGATATTGAATGATGGATCTCTCAAGTCTAGTGAAGAGATATCTTGCTCTTCTCATTGGATTCTTGACATTCTGTTAGGCAGCAATATTGGTTACAAATTGTATTCTTAGTTAATTTTGTTCAACTTTTACATTGTCAAGGAAGAGAAGCTACGGGGACGACCTGGCTATGAGCACTTGAATGAACCGCTGCACATCTTGATTGAGGCCGATTTACCAGCCAATATTGTTGATATAAAGCTCAGACAAGCACAGGAAATTATTGAAGAACTGCTCAAACCTGTGGTATGTTTCCGAAATAGCTGTTTTAGTAAAGGCTCGCTTATTATTTTTTAGAATGTATGGTTTAGTTTTCCTTGAATTAATCCATAAGATGGCAACCTGGTTAGGCATCTCTGTCTTTCTTAAGAGAAGTTGTAGGTTTGAATTTCCACTTACGTATTTGTGGGTGATATTCTTAAAAAAAATTATCCAAAAGGTGTTTGTGGGAGTCATATGCTTGTTAGAAAGATGAAAGTTGCTTTCAACAGTCTATCTTCAATCAACTGGGCCAAGTTATCATTTACCTAGGTTGATCATATATGACCCACTACTTATCTCTTTGACCACTCATTCTGCGACAGACTTGATTCTGATTACTTGATGCGAATGCGATGTTAACTAATTAACAAGCATGTGAACCTTCCACTTGCAGGATGAGAGTCACGATTACATCAAAAGGCAGCAGTTACGTGAACTCGCAATGCTAAATTCGAGTTTCAGAGAAGAGAGTCCAGGACCAGGTGGCAGTGTCTCTCCCTTCAACTCAAGTGGAATGAAACGTGCTAAAACGGGTCGG

mRNA sequence

ATGTCTGGTCTGTACAGTACCAACTTCTCCCCTGCAAGAGCTGCCTCTCCTCACATCAGAAGTACTCCTGATGTCGATAGTCAGTACTTGTCGGAGCTACTGGCGGAGCATCAGAAGTTCGGTCCCTTCATGCAAGTTCTTCCGATCTGCAGCCGACTTTTGAATCAAGAGATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTTGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTAGCTCAGGTCTGGGTGGCTGGAATGGACTTCCTCAGGAGAGATTAAGTAGACCCCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCGCTCACAGTAAAGAGGATTCTACGTTTGGAAATACCAGTGGATACTTACCCAAACTTCAATTTTGTAGGGCGTCTTTTGGGACCTCGGGGTAATTCATTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTCTACATTCGAGGGAAAGGGTCGATAAAGGATCCCGACAAGGAAGAGAAGCTACGGGGACGACCTGGCTATGAGCACTTGAATGAACCGCTGCACATCTTGATTGAGGCCGATTTACCAGCCAATATTGTTGATATAAAGCTCAGACAAGCACAGGAAATTATTGAAGAACTGCTCAAACCTGTGGATGAGAGTCACGATTACATCAAAAGGCAGCAGTTACGTGAACTCGCAATGCTAAATTCGAGTTTCAGAGAAGAGAGTCCAGGACCAGGTGGCAGTGTCTCTCCCTTCAACTCAAGTGGAATGAAACGTGCTAAAACGGGTCGG

Coding sequence (CDS)

ATGTCTGGTCTGTACAGTACCAACTTCTCCCCTGCAAGAGCTGCCTCTCCTCACATCAGAAGTACTCCTGATGTCGATAGTCAGTACTTGTCGGAGCTACTGGCGGAGCATCAGAAGTTCGGTCCCTTCATGCAAGTTCTTCCGATCTGCAGCCGACTTTTGAATCAAGAGATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTTGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTAGCTCAGGTCTGGGTGGCTGGAATGGACTTCCTCAGGAGAGATTAAGTAGACCCCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCGCTCACAGTAAAGAGGATTCTACGTTTGGAAATACCAGTGGATACTTACCCAAACTTCAATTTTGTAGGGCGTCTTTTGGGACCTCGGGGTAATTCATTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTCTACATTCGAGGGAAAGGGTCGATAAAGGATCCCGACAAGGAAGAGAAGCTACGGGGACGACCTGGCTATGAGCACTTGAATGAACCGCTGCACATCTTGATTGAGGCCGATTTACCAGCCAATATTGTTGATATAAAGCTCAGACAAGCACAGGAAATTATTGAAGAACTGCTCAAACCTGTGGATGAGAGTCACGATTACATCAAAAGGCAGCAGTTACGTGAACTCGCAATGCTAAATTCGAGTTTCAGAGAAGAGAGTCCAGGACCAGGTGGCAGTGTCTCTCCCTTCAACTCAAGTGGAATGAAACGTGCTAAAACGGGTCGG

Protein sequence

MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR

Homology

[Close]

BLAST of MS013845 vs. NCBI nr
Match: XP_022156254.1 (KH domain-containing protein At3g08620-like [Momordica charantia])

HSP 1 Score: 562.0 bits (1447), Expect = 2.9e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQ+LPICSRLLNQEILR
Sbjct: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. NCBI nr
Match: XP_022925243.1 (KH domain-containing protein At3g08620-like isoform X2 [Cucurbita moschata] >KAG6595538.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 551.2 bits (1419), Expect = 5.1e-153
Identity = 273/281 (97.15%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSS+GL GWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. NCBI nr
Match: XP_023518807.1 (KH domain-containing protein At3g08620-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 272/281 (96.80%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDV+SQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSS+GL GWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. NCBI nr
Match: XP_022966420.1 (KH domain-containing protein At3g08620-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 549.3 bits (1414), Expect = 2.0e-152
Identity = 272/281 (96.80%), Postives = 276/281 (98.22%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFM VLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSS+GL GWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. NCBI nr
Match: XP_008463293.1 (PREDICTED: KH domain-containing protein At2g38610 [Cucumis melo])

HSP 1 Score: 548.1 bits (1411), Expect = 4.3e-152
Identity = 271/281 (96.44%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS+GL GWNGLPQERLSR PGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.2e-130
Identity = 232/283 (81.98%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   MSGLYS-TNFSPARAASPHIRS-TPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEI 60
           MSGLY+  NFSP+RAASP IR+ + DVDSQY+S+LLAEHQK GPFMQVLPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMD 120
            R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GLGGWNGLP ER+  P GM M+
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAME 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGKG
Sbjct: 121 WQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 180

Query: 181 SIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHD 240
           SIKDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDIKLRQAQEIIEEL+KPVDES D
Sbjct: 181 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           YIKRQQLRELA+LNS+ RE SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of MS013845 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 3.7e-130
Identity = 243/286 (84.97%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 1   MSGLY--STNFSPARAASPHIRSTPDVD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSGLY  S+ FSPARAASP IRSTP++D SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTM 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS++GLGGWNGL QERLS  PGMTM
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           DWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRGK
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESH 240
           GSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+I+LRQAQEIIEELLKPVDES 
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 281
           D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of MS013845 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.4e-115
Identity = 208/282 (73.76%), Postives = 239/282 (84.75%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTP-DVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEIL 60
           MSGLYS  FSPAR  SP IRS P DVDSQYL+ELLAEHQK GPFMQVLPICS+LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDW 120
           RVS ++ N GF D DR R RSPSPM+S N  SN S +G   WNGL QERL  P G +MDW
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           Q AP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVE +TGCRV+IRGKGS
Sbjct: 121 QGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDY 240
           IKDP KE+KLRG+PGYEHL++PLHILIEA+ PA+I+D +LR AQE+IEELLKPVDES D+
Sbjct: 181 IKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDF 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
            KRQQLRELAMLNS+ RE+SP P GSVSPF++ GMKRAKTG+
Sbjct: 241 YKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of MS013845 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.1e-77
Identity = 158/284 (55.63%), Postives = 196/284 (69.01%), Query Frame = 0


Query: 5   YSTNFS--PARAASPH----IRSTPDV---DSQYLSELLAEHQKFGPFMQVLPICSRLLN 64
           YS++ S  P+   SP+    +RS   V     +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGM 124
           QEILRV+ ++ N        L H  PSP+AS  +  N  +   G  +  P ER S P   
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQNARADMNGWASQFPSER-SVPSSP 151

Query: 125 TMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIR 184
             +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV IR
Sbjct: 152 GPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIR 211

Query: 185 GKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDE 244
           G+GSIKDP KEE +RG+PGYEHLNEPLHIL+EA+LP  IVD +L QA+EI+++LL P++E
Sbjct: 212 GRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEE 271

Query: 245 SHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           +HD  K+QQLRELA+LN + REE     GSVSP+NS GMKRAKT
Sbjct: 272 THDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of MS013845 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-76
Identity = 155/277 (55.96%), Postives = 196/277 (70.76%), Query Frame = 0


Query: 11  PARAASPH----IRSTPDV---DSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSG 70
           P+   SP+    +RS P       +YLSELLAE  K  PF+ VLP   RL+NQEILRV+ 
Sbjct: 36  PSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTT 95

Query: 71  MMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGW-NGLPQERLSRPPGMTMDWQSA 130
           ++ N     L + R   PSP+AS  +  N S + + GW +  P ER S       +W ++
Sbjct: 96  LLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSER-SVSSSPAPNWLNS 155

Query: 131 PASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKD 190
           P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GSIKD
Sbjct: 156 PGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD 215

Query: 191 PDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYIKR 250
           P KE+ +RG+PGYEHLNEPLHIL+EA+LP  IVD +L QA+EI+++LL PV+E+HD+ K+
Sbjct: 216 PIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKK 275

Query: 251 QQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           QQLRELA+LN S REE     GS+SP+NS GMKRAKT
Sbjct: 276 QQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of MS013845 vs. ExPASy TrEMBL
Match: A0A6J1DSV9 (KH domain-containing protein At3g08620-like OS=Momordica charantia OX=3673 GN=LOC111023186 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.4e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQ+LPICSRLLNQEILR
Sbjct: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. ExPASy TrEMBL
Match: A0A6J1EEN1 (KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.5e-153
Identity = 273/281 (97.15%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSS+GL GWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. ExPASy TrEMBL
Match: A0A6J1HRK9 (KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466075 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 9.5e-153
Identity = 272/281 (96.80%), Postives = 276/281 (98.22%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFM VLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSS+GL GWNGLPQERLSRPPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. ExPASy TrEMBL
Match: A0A1S3CIV3 (KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152
Identity = 271/281 (96.44%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS+GL GWNGLPQERLSR PGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. ExPASy TrEMBL
Match: A0A0A0KXW7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337270 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 4.7e-152
Identity = 270/281 (96.09%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MSGLYSTNFSPARAASPHIRSTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSG+YSTNFSPAR ASPHIR+TPDVDSQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL++NVSS+GL GWNGLPQERLSR PGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDI+LRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of MS013845 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-131
Identity = 232/283 (81.98%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   MSGLYS-TNFSPARAASPHIRS-TPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEI 60
           MSGLY+  NFSP+RAASP IR+ + DVDSQY+S+LLAEHQK GPFMQVLPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTMD 120
            R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GLGGWNGLP ER+  P GM M+
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAME 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGKG
Sbjct: 121 WQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 180

Query: 181 SIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHD 240
           SIKDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDIKLRQAQEIIEEL+KPVDES D
Sbjct: 181 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           YIKRQQLRELA+LNS+ RE SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of MS013845 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-131
Identity = 243/286 (84.97%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 1   MSGLY--STNFSPARAASPHIRSTPDVD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSGLY  S+ FSPARAASP IRSTP++D SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTM 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS++GLGGWNGL QERLS  PGMTM
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           DWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRGK
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESH 240
           GSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+I+LRQAQEIIEELLKPVDES 
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 281
           D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of MS013845 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-131
Identity = 243/286 (84.97%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 1   MSGLY--STNFSPARAASPHIRSTPDVD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSGLY  S+ FSPARAASP IRSTP++D SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGMTM 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS++GLGGWNGL QERLS  PGMTM
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           DWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRGK
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESH 240
           GSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+I+LRQAQEIIEELLKPVDES 
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 281
           D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of MS013845 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 288.5 bits (737), Expect = 5.8e-78
Identity = 158/284 (55.63%), Postives = 196/284 (69.01%), Query Frame = 0


Query: 5   YSTNFS--PARAASPH----IRSTPDV---DSQYLSELLAEHQKFGPFMQVLPICSRLLN 64
           YS++ S  P+   SP+    +RS   V     +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGWNGLPQERLSRPPGM 124
           QEILRV+ ++ N        L H  PSP+AS  +  N  +   G  +  P ER S P   
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQNARADMNGWASQFPSER-SVPSSP 151

Query: 125 TMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIR 184
             +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV IR
Sbjct: 152 GPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIR 211

Query: 185 GKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDE 244
           G+GSIKDP KEE +RG+PGYEHLNEPLHIL+EA+LP  IVD +L QA+EI+++LL P++E
Sbjct: 212 GRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEE 271

Query: 245 SHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           +HD  K+QQLRELA+LN + REE     GSVSP+NS GMKRAKT
Sbjct: 272 THDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of MS013845 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 287.7 bits (735), Expect = 9.9e-78
Identity = 155/277 (55.96%), Postives = 196/277 (70.76%), Query Frame = 0


Query: 11  PARAASPH----IRSTPDV---DSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSG 70
           P+   SP+    +RS P       +YLSELLAE  K  PF+ VLP   RL+NQEILRV+ 
Sbjct: 36  PSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTT 95

Query: 71  MMSNQGFCDLDRLRHRSPSPMASSNLISNVSSSGLGGW-NGLPQERLSRPPGMTMDWQSA 130
           ++ N     L + R   PSP+AS  +  N S + + GW +  P ER S       +W ++
Sbjct: 96  LLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSER-SVSSSPAPNWLNS 155

Query: 131 PASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKD 190
           P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GSIKD
Sbjct: 156 PGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD 215

Query: 191 PDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIKLRQAQEIIEELLKPVDESHDYIKR 250
           P KE+ +RG+PGYEHLNEPLHIL+EA+LP  IVD +L QA+EI+++LL PV+E+HD+ K+
Sbjct: 216 PIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKK 275

Query: 251 QQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           QQLRELA+LN S REE     GS+SP+NS GMKRAKT
Sbjct: 276 QQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

The following BLAST results are available for this feature:

BLAST of MS013845 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156254.1	2.9e-156	99.64	KH domain-containing protein At3g08620-like [Momordica charantia]	[more]
XP_022925243.1	5.1e-153	97.15	KH domain-containing protein At3g08620-like isoform X2 [Cucurbita moschata] >KAG...	[more]
XP_023518807.1	1.5e-152	96.80	KH domain-containing protein At3g08620-like isoform X2 [Cucurbita pepo subsp. pe...	[more]
XP_022966420.1	2.0e-152	96.80	KH domain-containing protein At3g08620-like isoform X2 [Cucurbita maxima]	[more]
XP_008463293.1	4.3e-152	96.44	PREDICTED: KH domain-containing protein At2g38610 [Cucumis melo]	[more]

BLAST of MS013845 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYR4	2.2e-130	81.98	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q9ZVI3	3.7e-130	84.97	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q75GR5	4.4e-115	73.76	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	8.1e-77	55.63	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]
Q0WLR1	1.4e-76	55.96	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]

BLAST of MS013845 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSV9	1.4e-156	99.64	KH domain-containing protein At3g08620-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1EEN1	2.5e-153	97.15	KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1HRK9	9.5e-153	96.80	KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A1S3CIV3	2.1e-152	96.44	KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 P...	[more]
A0A0A0KXW7	4.7e-152	96.09	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337270 PE=4 SV=...	[more]

BLAST of MS013845 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08620.1	1.6e-131	81.98	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	2.6e-131	84.97	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	2.6e-131	84.97	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	5.8e-78	55.63	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	9.9e-78	55.96	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 131..231 e-value: 1.0E-5 score: 35.0
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 23..70 e-value: 1.9E-13 score: 49.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 19..262 e-value: 7.8E-69 score: 233.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 138..254
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 148..184 e-value: 1.2E-4 score: 21.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..281
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 136..256 e-value: 1.81669E-54 score: 170.502
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013845.1	MS013845.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding