MS013836 (gene) Bitter gourd (TR) v1

Overview
NameMS013836
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLEA_2 domain-containing protein
Locationscaffold607: 127065 .. 127691 (+)
RNA-Seq ExpressionMS013836
SyntenyMS013836
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCGCCTCCTCCGCAACCAAGGATCCCAAATCCACCATCGCCGCCGCCCGCTCCCGGAGACGCCGCAACATCTGCATCGGAGCCTCCCTCGCCGCGCTCCTCCTCCTCGTCATTCTAATCCTCATTCTGGCCTTCACGGTGTTCAAGGCCAGGCGCCCGATCACCGCCATCAACTCCGTCGCCCTAGCGGATCTCGCCGTCTCGCTCGACATAGCCCGAGTCGCCGTCGACATCAACGTCACTCTGATCGCCGCCGTCGCCGTTACGAACCCTAACAAGGTCGGTTTCAGCTACTCGAACAGCACCGCGCTGCTCAACTACAGAGGCGAGCTGGTCGGGGAGGCGCCGATTCCCGCCGGCCGGATCGACGCGGATCAGAGCAAGGACATGAACATCACGCTCACGATCATGGCGGACCGGCTGCTGAGTAAGTCGGCGGCGGTGTTCTCCGACGTCGTCGCCGGATCGATGCCGTTGAACACGTACACGAGAATTTCAGGGAGGGTGAAGATATTGGGGATTTTCAAGATTCACGTCGTTTCGACCACGTCCTGTGATTTGACAATCGACATATCGAGCAGAAAAATTGGAGATCAGCAGTGTAATTATCATACTAAGATC

mRNA sequence

ATGGAAATCGCCTCCTCCGCAACCAAGGATCCCAAATCCACCATCGCCGCCGCCCGCTCCCGGAGACGCCGCAACATCTGCATCGGAGCCTCCCTCGCCGCGCTCCTCCTCCTCGTCATTCTAATCCTCATTCTGGCCTTCACGGTGTTCAAGGCCAGGCGCCCGATCACCGCCATCAACTCCGTCGCCCTAGCGGATCTCGCCGTCTCGCTCGACATAGCCCGAGTCGCCGTCGACATCAACGTCACTCTGATCGCCGCCGTCGCCGTTACGAACCCTAACAAGGTCGGTTTCAGCTACTCGAACAGCACCGCGCTGCTCAACTACAGAGGCGAGCTGGTCGGGGAGGCGCCGATTCCCGCCGGCCGGATCGACGCGGATCAGAGCAAGGACATGAACATCACGCTCACGATCATGGCGGACCGGCTGCTGAGTAAGTCGGCGGCGGTGTTCTCCGACGTCGTCGCCGGATCGATGCCGTTGAACACGTACACGAGAATTTCAGGGAGGGTGAAGATATTGGGGATTTTCAAGATTCACGTCGTTTCGACCACGTCCTGTGATTTGACAATCGACATATCGAGCAGAAAAATTGGAGATCAGCAGTGTAATTATCATACTAAGATC

Coding sequence (CDS)

ATGGAAATCGCCTCCTCCGCAACCAAGGATCCCAAATCCACCATCGCCGCCGCCCGCTCCCGGAGACGCCGCAACATCTGCATCGGAGCCTCCCTCGCCGCGCTCCTCCTCCTCGTCATTCTAATCCTCATTCTGGCCTTCACGGTGTTCAAGGCCAGGCGCCCGATCACCGCCATCAACTCCGTCGCCCTAGCGGATCTCGCCGTCTCGCTCGACATAGCCCGAGTCGCCGTCGACATCAACGTCACTCTGATCGCCGCCGTCGCCGTTACGAACCCTAACAAGGTCGGTTTCAGCTACTCGAACAGCACCGCGCTGCTCAACTACAGAGGCGAGCTGGTCGGGGAGGCGCCGATTCCCGCCGGCCGGATCGACGCGGATCAGAGCAAGGACATGAACATCACGCTCACGATCATGGCGGACCGGCTGCTGAGTAAGTCGGCGGCGGTGTTCTCCGACGTCGTCGCCGGATCGATGCCGTTGAACACGTACACGAGAATTTCAGGGAGGGTGAAGATATTGGGGATTTTCAAGATTCACGTCGTTTCGACCACGTCCTGTGATTTGACAATCGACATATCGAGCAGAAAAATTGGAGATCAGCAGTGTAATTATCATACTAAGATC

Protein sequence

MEIASSATKDPKSTIAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI
Homology
BLAST of MS013836 vs. NCBI nr
Match: XP_022156243.1 (uncharacterized protein LOC111023175 [Momordica charantia])

HSP 1 Score: 372.1 bits (954), Expect = 3.2e-99
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0

Query: 1   MEIASSATKDPKSTIAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAIN 60
           MEIASSATKD KST AAARSRRRRNICIGASL ALLLLVILILILAFTVFKARRPITAIN
Sbjct: 1   MEIASSATKDLKSTTAAARSRRRRNICIGASLGALLLLVILILILAFTVFKARRPITAIN 60

Query: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120
           SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP
Sbjct: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120

Query: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180
           AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH
Sbjct: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180

Query: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           VVSTTSCDLTIDISSRKIGDQQCNYHTKI
Sbjct: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

BLAST of MS013836 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 4.6e-82
Identity = 172/211 (81.52%), Postives = 190/211 (90.05%), Query Frame = 0

Query: 1   MEIASSATKDPKST--IAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITA 60
           MEIASS+ KDPKST  IAAARSRRRRN CIG S+A ++LLV+LI+ILAFTVFKA+RPITA
Sbjct: 1   MEIASSSNKDPKSTQSIAAARSRRRRNTCIGISIATVVLLVVLIVILAFTVFKAKRPITA 60

Query: 61  INSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAP 120
           INSV LADL VSL++ARV+VDINVTLIA VA+TNPNKVGFSYSNSTA LNYRGELVGEAP
Sbjct: 61  INSVTLADLDVSLNLARVSVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120

Query: 121 IPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFK 180
           I AGRIDA Q K+MNITLTIMADRLL K+  VFSDVVAG+MPLNTYTRISG+V+ILGIF 
Sbjct: 121 ITAGRIDAGQRKEMNITLTIMADRLL-KTTTVFSDVVAGTMPLNTYTRISGKVRILGIFN 180

Query: 181 IHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           IHVVSTTSCD  + IS RK+GDQQCNYHTKI
Sbjct: 181 IHVVSTTSCDFNVSISERKVGDQQCNYHTKI 210

BLAST of MS013836 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 0

Query: 1   MEIASSAT---KDPKST-----IAAARSRRRRNICIGASLAALLLLVILILILAFTVFKA 60
           MEIASS++   KDPKST      AAARSR+RRN CIG S+A LLLL+ILI+ILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  RRPITAINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGE 120
           +RPIT +NSVALADL VSL++ARV+VDINVTLIA +A+TNPNKVGFSY NSTA LNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVK 180
           LVGEAPI AG+IDA + K+MNITLTIMADRLL K+  VFSDVVAGSMPLNTY RISG+VK
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLL-KTTTVFSDVVAGSMPLNTYARISGKVK 180

Query: 181 ILGIFKIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           ILGIF IHVVSTTSCD  +DIS RK+GDQQCNYHTKI
Sbjct: 181 ILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of MS013836 vs. NCBI nr
Match: XP_022966458.1 (uncharacterized protein LOC111466106 [Cucurbita maxima])

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-78
Identity = 164/209 (78.47%), Postives = 187/209 (89.47%), Query Frame = 0

Query: 1   MEIASSATKDPKSTIAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAIN 60
           MEIASS TKDPKS     RSRRRRN CIG S+A +LLL++LI+ILAFTVFKA+RPIT IN
Sbjct: 1   MEIASSTTKDPKS----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITTIN 60

Query: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120
           SVALADL +SL+IAR AV +N+TLI  V++TNPNKVGFSYSNSTALLNYRGEL+GEAPIP
Sbjct: 61  SVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIP 120

Query: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180
           +GRI+A+QSK MNIT+TIMADRLL +S+ V SDVVAGSMPLNTYTRISG+V+ILGIFKI 
Sbjct: 121 SGRINANQSKRMNITVTIMADRLL-RSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKIR 180

Query: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           VVS+TSCD TIDIS RKIGDQQC+YHTKI
Sbjct: 181 VVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of MS013836 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-77
Identity = 165/216 (76.39%), Postives = 187/216 (86.57%), Query Frame = 0

Query: 1   MEIASSAT---KDPKST----IAAARSRRRRNICIGASLAALLLLVILILILAFTVFKAR 60
           MEIASS++   KDPKST     AA RSR+RRN CIG S+A LLLL+I+I+ILAFTVFKA+
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGEL 120
           RPIT +NSVALADL VSL++A V+VDINVTLIA +A+TNPNKVGFSY NSTA LNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKI 180
           VGEAPI AG+IDA + K+MNITLTIMADRLL K+  VF+D VAGSMPLNTYTRISG+VKI
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLL-KTTTVFTDAVAGSMPLNTYTRISGKVKI 180

Query: 181 LGIFKIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           LGIF IHVVS+TSCD  +DIS RKIGDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of MS013836 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0

Query: 1   MEIASSATKDPKSTIAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAIN 60
           MEIASSATKD KST AAARSRRRRNICIGASL ALLLLVILILILAFTVFKARRPITAIN
Sbjct: 1   MEIASSATKDLKSTTAAARSRRRRNICIGASLGALLLLVILILILAFTVFKARRPITAIN 60

Query: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120
           SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP
Sbjct: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120

Query: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180
           AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH
Sbjct: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180

Query: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           VVSTTSCDLTIDISSRKIGDQQCNYHTKI
Sbjct: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

BLAST of MS013836 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 0

Query: 1   MEIASSAT---KDPKST-----IAAARSRRRRNICIGASLAALLLLVILILILAFTVFKA 60
           MEIASS++   KDPKST      AAARSR+RRN CIG S+A LLLL+ILI+ILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  RRPITAINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGE 120
           +RPIT +NSVALADL VSL++ARV+VDINVTLIA +A+TNPNKVGFSY NSTA LNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVK 180
           LVGEAPI AG+IDA + K+MNITLTIMADRLL K+  VFSDVVAGSMPLNTY RISG+VK
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLL-KTTTVFSDVVAGSMPLNTYARISGKVK 180

Query: 181 ILGIFKIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           ILGIF IHVVSTTSCD  +DIS RK+GDQQCNYHTKI
Sbjct: 181 ILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of MS013836 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.0e-78
Identity = 164/209 (78.47%), Postives = 187/209 (89.47%), Query Frame = 0

Query: 1   MEIASSATKDPKSTIAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAIN 60
           MEIASS TKDPKS     RSRRRRN CIG S+A +LLL++LI+ILAFTVFKA+RPIT IN
Sbjct: 1   MEIASSTTKDPKS----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITTIN 60

Query: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120
           SVALADL +SL+IAR AV +N+TLI  V++TNPNKVGFSYSNSTALLNYRGEL+GEAPIP
Sbjct: 61  SVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIP 120

Query: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180
           +GRI+A+QSK MNIT+TIMADRLL +S+ V SDVVAGSMPLNTYTRISG+V+ILGIFKI 
Sbjct: 121 SGRINANQSKRMNITVTIMADRLL-RSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKIR 180

Query: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           VVS+TSCD TIDIS RKIGDQQC+YHTKI
Sbjct: 181 VVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of MS013836 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 165/216 (76.39%), Postives = 187/216 (86.57%), Query Frame = 0

Query: 1   MEIASSAT---KDPKST----IAAARSRRRRNICIGASLAALLLLVILILILAFTVFKAR 60
           MEIASS++   KDPKST     AA RSR+RRN CIG S+A LLLL+I+I+ILAFTVFKA+
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGEL 120
           RPIT +NSVALADL VSL++A V+VDINVTLIA +A+TNPNKVGFSY NSTA LNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKI 180
           VGEAPI AG+IDA + K+MNITLTIMADRLL K+  VF+D VAGSMPLNTYTRISG+VKI
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLL-KTTTVFTDAVAGSMPLNTYTRISGKVKI 180

Query: 181 LGIFKIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           LGIF IHVVS+TSCD  +DIS RKIGDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of MS013836 vs. ExPASy TrEMBL
Match: A0A6J1EAI5 (uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC111432307 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.8e-77
Identity = 164/209 (78.47%), Postives = 188/209 (89.95%), Query Frame = 0

Query: 1   MEIASSATKDPKSTIAAARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAIN 60
           MEIASS TKDPKS     RSRRRRN CIG S+A +LLL++LI+ILAFTVFKA+RPITAIN
Sbjct: 16  MEIASS-TKDPKS----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITAIN 75

Query: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120
           SVALADL +SL+IAR AV +N+TLI  V++TNPNKVGFSYSNSTALLNYRGEL+GEAPIP
Sbjct: 76  SVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIP 135

Query: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180
           +GRI+A+QSK MNIT+TIMADRLL +S+ V SDVVAGS+PLNTYTRISG+V+ILGIFKI 
Sbjct: 136 SGRINANQSKRMNITVTIMADRLL-RSSTVLSDVVAGSIPLNTYTRISGKVRILGIFKIR 195

Query: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 210
           VVS+TSCD TIDIS RKIGDQQC+YHTKI
Sbjct: 196 VVSSTSCDFTIDISDRKIGDQQCSYHTKI 218

BLAST of MS013836 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45
Identity = 101/208 (48.56%), Postives = 151/208 (72.60%), Query Frame = 0

Query: 4   ASSATKDPKSTIAAARSRRRRN--ICIGASLAALLLLVILILILAFTVFKARRPITAINS 63
           ASS      +T  A + RR+RN  ICI  ++  +LL+ I+I+ILAFT+FK +RP T I+S
Sbjct: 29  ASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDS 88

Query: 64  VALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIPA 123
           V +  L  S++   + V +N+TL   +++ NPN++GFSY +S+ALLNYRG+++GEAP+PA
Sbjct: 89  VTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPA 148

Query: 124 GRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIHV 183
            RI A ++  +NITLT+MADRLLS++  + SDV+AG +PLNT+ +++G+V +L IFKI V
Sbjct: 149 NRIAARKTVPLNITLTLMADRLLSET-QLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKV 208

Query: 184 VSTTSCDLTIDISSRKIGDQQCNYHTKI 210
            S++SCDL+I +S R +  Q C Y TK+
Sbjct: 209 QSSSSCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of MS013836 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21
Identity = 66/187 (35.29%), Postives = 106/187 (56.68%), Query Frame = 0

Query: 18  ARSRRRRNICIGASLAALLLLVILILILAFTVFKARRPITAINSVALADLAVSLDIARV- 77
           +R+R + +IC+    A  L+L  ++L L FTVF+ + PI  +N V +  L       +V 
Sbjct: 32  SRNRIKCSICV---TATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQ 91

Query: 78  AVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKDMNITL 137
            +  N+++I  V+V NPN   F YSN+T  + Y+G LVGEA    G+    ++  MN+T+
Sbjct: 92  LLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTV 151

Query: 138 TIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIHVVSTTSCDLTIDISSR 197
            IM DR+LS          +G + + +YTR+ G+VKI+GI K HV    +C + ++I+ +
Sbjct: 152 DIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQ 211

Query: 198 KIGDQQC 204
            I D  C
Sbjct: 212 AIQDVDC 215

BLAST of MS013836 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 51/188 (27.13%), Postives = 95/188 (50.53%), Query Frame = 0

Query: 22  RRRNICIGASLAALLLLVILILILAFTVFKARRPITAINSVALADLAVSLDIARVAVDIN 81
           +RR  CI + +  +L ++ +  ++   VFK + PI    S  +  ++ ++ +    V +N
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLP-YEVQLN 62

Query: 82  VTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKDMNITLTIMAD 141
            TL   + + NPN   F Y     L+ YR  LVG   +P+  + A  S  +   L +  D
Sbjct: 63  FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 122

Query: 142 RLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIHVVSTTSCDLTIDISSRKIGDQ 201
           + ++    +  DV+ G + + T  ++ G++ +LGIFKI + S + C+L +   S  + DQ
Sbjct: 123 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 182

Query: 202 QCNYHTKI 210
            C+  TK+
Sbjct: 183 VCDLKTKL 189

BLAST of MS013836 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-11
Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 0

Query: 19  RSRRRRNI--CIGASLAALLLLVILILILAFTVFKARRPITAINSVALADLAVSLDIARV 78
           RS  R N+  C  A++  L+LLV+L L++ FTVFK + P  ++N+V L   AVS + A  
Sbjct: 9   RSSGRTNLASCAVATVFLLILLVVL-LVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA-- 68

Query: 79  AVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKDMNITL 138
               N +    VAV NPN+  FS+ +S+  L Y G  VG   IPAG+ID+ + + M  T 
Sbjct: 69  ----NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATF 128

Query: 139 TIMADRLLSKSAAVFSDVVAGSMP 161
           T+ +  +   S++  S V A  +P
Sbjct: 129 TVHSFPISPPSSSAISTVSAAVIP 145

BLAST of MS013836 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 49.3 bits (116), Expect = 4.4e-06
Identity = 45/181 (24.86%), Postives = 85/181 (46.96%), Query Frame = 0

Query: 30  ASLAALLLLVILILILAFTVFKARRPITAINSVALADLAVSLDIA---RVAVDINVTLIA 89
           A LA L+L V+LI+ILA    K ++P   +  VA+  + +S   A        +++T+  
Sbjct: 49  AFLALLVLAVVLIVILA---VKPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRM 108

Query: 90  AVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKDMNITLTIMADRLLSK 149
                NPNKVG  Y  S+  + Y+G  +G A +P    DA  +K++  T+++    L+  
Sbjct: 109 LFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQA 168

Query: 150 SAA--VFSDVVAGSMPLNTYTRISGRVKILGIFKIHVVSTTSCDLTIDISSRKIGDQQCN 206
            AA  V    +   + L     +  +++++      V  + +C + I    + +  +QC 
Sbjct: 169 HAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCG 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156243.13.2e-9998.56uncharacterized protein LOC111023175 [Momordica charantia][more]
XP_038882665.14.6e-8281.52uncharacterized protein LOC120073854 [Benincasa hispida][more]
XP_008463309.11.6e-7977.88PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo][more]
XP_022966458.14.0e-7878.47uncharacterized protein LOC111466106 [Cucurbita maxima][more]
XP_004142665.12.6e-7776.39uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DQ351.5e-9998.56uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A1S3CJB57.9e-8077.88uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A6J1HS802.0e-7878.47uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
A0A0A0L0941.3e-7776.39LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A6J1EAI54.8e-7778.47uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
Match NameE-valueIdentityDescription
AT3G54200.11.3e-4548.56Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.12.8e-2135.29Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.11.0e-1527.13Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.14.5e-1137.50Glycine-rich protein family [more]
AT2G01080.14.4e-0624.86Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 88..181
e-value: 2.5E-13
score: 50.4
NoneNo IPR availableGENE3D2.60.40.1820coord: 44..192
e-value: 1.1E-9
score: 40.2
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 18..208
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 18..208
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 81..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS013836.1MS013836.1mRNA