MS013681 (gene) Bitter gourd (TR) v1

Overview


Name	MS013681
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribosomal protein L19
Location	scaffold263: 146640 .. 148289 (+)
RNA-Seq Expression	MS013681
Synteny	MS013681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCCCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGCAGAGGCAAGGTCTGGCTCGATCCCAATGAATGCAACGAAATCTCCATGGCCAACTCTCGTACGCTCTCTCCATCTTCCTCTCTTCGTTTAGATTCGATTCTTTTGCTCTGTTCATTGTTTGGTGTATCTCCATGTTGTTGCTTGAACTTCAGTTCTTTCGGTTTCACAATCTGGATGTTGTTCTGTGTTTCTTGGATTACTCCGATGAAAACACGTTTTCGGATCTGAAAATTTCCCCCCTCGGTTAGGTTTTGTCTGGGAAGTCGTTGCTTTATGCGTTTAATGTTGTTTTTCTTGGTTATCGCAATACTAGTTGAAACTTGAATTAATTCCTTTTCCCTCTCTCAACTCCTGGTCCTCCTATCGCGTTGAAACTGGTAATTACTTGATGCAGTAGTTTTATTTTATCATCTGTAGCAGATTGCTGAGAGATGAGAATCATGTTGTTAAACTAAATTTTTATTGGATTGGAATGTTTAAACTTCGTTCTTAGATTCGGCACTCAGTGTGGAAGGCGCTTCTTCGCTTTTCCATGGAACCGGTTTCAGTTTTTCCTCTTGTTACTCTTTTGAATTCCACAAGCCCTATTTTTTTGTTAGGAGCAATGTATGTCTGTCATATGCATGAAGTGTACTTTTATTCTTGCTAGATTATTGTCATCTTTGTTATGTATTTGTAATCATTCATGCCTGATGCAAATTATGTTATAGAACTGTTTGTGGTGTGTTTCTAATTAATGTTTGGACTGGTGAGTACAGGCCAAAATATAAGAAAGTTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAAATCCACTCTCGTTCCCGAGCACGCCGAATGAAGGAGGCGAAGAGGAAGGGTCGCCACTCAGGATATGGTACTTTTCTTCCAAAGTCCTAATTTATATATATGAATGCACTTTTAGAGAAGCGTTTATGATGATCATTTTTCCGGGTCTCAATAATATTCAGTACTTCTTATGCACATACCCATAAAGTTTTCCTTTTCGCGACAAAAAGTTGCGAACTTAATGAGGCACGGGACTATTCTTTGTTTTTGTATTAAAATTATTTTTATCAACTGTATTCAGGTAAGCGTAAGGGTACTAGGGAGGCAAGGCTTCCAACCAAGATACTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTTCGCAAATATAGAGAGTCTAAGAAGATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAACGTCTTCAAGAACAAGCGTGTGCTAATGGAGAGCATCCACAAGTCGAAGGCTGAGAAGGCTAGAGAGAAGACATTATCAGATCAATTTGAGGCCAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGAAAAATTGCTCGAAGGGAGGAACGATTGGCACAGGTTTTTCCCCCCTTTACTCTTGAATATTACTAACCCGATTACTTTCCTACTCTCAACATCATTATGGGTTACTTTCGTACTCTCAACATCATTATAATTGTATTTGTTCAATGTTGTAGGGACCTGGGGAGAAACAACCACCCGCGGCATCAGCAGCCCAACCTGGTGCTGGGTCTCAATCAACTCAG

mRNA sequence

ATGGTTTCCCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGCAGAGGCAAGGTCTGGCTCGATCCCAATGAATGCAACGAAATCTCCATGGCCAACTCTCGCCAAAATATAAGAAAGTTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAAATCCACTCTCGTTCCCGAGCACGCCGAATGAAGGAGGCGAAGAGGAAGGGTCGCCACTCAGGATATGGTAAGCGTAAGGGTACTAGGGAGGCAAGGCTTCCAACCAAGATACTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTTCGCAAATATAGAGAGTCTAAGAAGATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAACGTCTTCAAGAACAAGCGTGTGCTAATGGAGAGCATCCACAAGTCGAAGGCTGAGAAGGCTAGAGAGAAGACATTATCAGATCAATTTGAGGCCAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGAAAAATTGCTCGAAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGGCATCAGCAGCCCAACCTGGTGCTGGGTCTCAATCAACTCAG

Coding sequence (CDS)

ATGGTTTCCCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGCAGAGGCAAGGTCTGGCTCGATCCCAATGAATGCAACGAAATCTCCATGGCCAACTCTCGCCAAAATATAAGAAAGTTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAAATCCACTCTCGTTCCCGAGCACGCCGAATGAAGGAGGCGAAGAGGAAGGGTCGCCACTCAGGATATGGTAAGCGTAAGGGTACTAGGGAGGCAAGGCTTCCAACCAAGATACTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTTCGCAAATATAGAGAGTCTAAGAAGATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAACGTCTTCAAGAACAAGCGTGTGCTAATGGAGAGCATCCACAAGTCGAAGGCTGAGAAGGCTAGAGAGAAGACATTATCAGATCAATTTGAGGCCAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGAAAAATTGCTCGAAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGGCATCAGCAGCCCAACCTGGTGCTGGGTCTCAATCAACTCAG

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKQPPAASAAQPGAGSQSTQ

Homology

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BLAST of MS013681 vs. NCBI nr
Match: XP_022153659.1 (60S ribosomal protein L19-1-like [Momordica charantia])

HSP 1 Score: 371.3 bits (952), Expect = 5.3e-99
Identity = 203/206 (98.54%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQ  AASAAQP AGSQSTQ
Sbjct: 181 LAQGPGEKQSSAASAAQPAAGSQSTQ 206

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BLAST of MS013681 vs. NCBI nr
Match: XP_038896810.1 (60S ribosomal protein L19-1-like [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 200/206 (97.09%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPP  SAAQP A SQSTQ
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQ 206

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BLAST of MS013681 vs. NCBI nr
Match: XP_008451555.1 (PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo] >KAA0067979.1 60S ribosomal protein L19-1-like [Cucumis melo var. makuwa] >TYK18144.1 60S ribosomal protein L19-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 199/206 (96.60%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPP  SAAQP A SQSTQ
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQ 206

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BLAST of MS013681 vs. NCBI nr
Match: XP_004136019.1 (60S ribosomal protein L19-1 [Cucumis sativus] >KAE8646346.1 hypothetical protein Csa_015693 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 199/206 (96.60%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPP  SAAQP A SQSTQ
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQ 206

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BLAST of MS013681 vs. NCBI nr
Match: XP_023004655.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 360.9 bits (925), Expect = 7.2e-96
Identity = 198/206 (96.12%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPPA SAAQP A  QSTQ
Sbjct: 181 LAQGPGEKQPPATSAAQPAA--QSTQ 204

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BLAST of MS013681 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 9.8e-88
Identity = 175/196 (89.29%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAASAA 197
           LA+GPG    P A+ A
Sbjct: 181 LAKGPGGDVAPVAAPA 196

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BLAST of MS013681 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-86
Identity = 175/200 (87.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGP--GEKQPPAASAAQP 199
           LAQGP  GE   PA +  QP
Sbjct: 181 LAQGPGGGETTTPAGAPQQP 200

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BLAST of MS013681 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-86
Identity = 175/197 (88.83%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAASAAQ 198
           LA+GPG   P AA  AQ
Sbjct: 181 LAKGPGGDIPAAAPPAQ 197

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BLAST of MS013681 vs. ExPASy Swiss-Prot
Match: Q3T0W9 (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.3e-62
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

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BLAST of MS013681 vs. ExPASy Swiss-Prot
Match: D0VWQ5 (60S ribosomal protein L19 OS=Canis lupus familiaris OX=9615 GN=RPL19 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.3e-62
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

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BLAST of MS013681 vs. ExPASy TrEMBL
Match: A0A6J1DJQ5 (Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111021109 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99
Identity = 203/206 (98.54%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQ  AASAAQP AGSQSTQ
Sbjct: 181 LAQGPGEKQSSAASAAQPAAGSQSTQ 206

[Close]

BLAST of MS013681 vs. ExPASy TrEMBL
Match: A0A5A7VS85 (Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00750 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 199/206 (96.60%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPP  SAAQP A SQSTQ
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQ 206

[Close]

BLAST of MS013681 vs. ExPASy TrEMBL
Match: A0A1S3BSJ2 (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 199/206 (96.60%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPP  SAAQP A SQSTQ
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQ 206

[Close]

BLAST of MS013681 vs. ExPASy TrEMBL
Match: A0A6J1KV74 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111497884 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.5e-96
Identity = 198/206 (96.12%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPPA SAAQP A  QSTQ
Sbjct: 181 LAQGPGEKQPPATSAAQPAA--QSTQ 204

[Close]

BLAST of MS013681 vs. ExPASy TrEMBL
Match: A0A6J1H702 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111460761 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 197/206 (95.63%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAASAAQPGAGSQSTQ 207
           LAQGPGEKQPP  SAAQP A  QSTQ
Sbjct: 181 LAQGPGEKQPPVTSAAQPAA--QSTQ 204

[Close]

BLAST of MS013681 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 324.3 bits (830), Expect = 7.0e-89
Identity = 175/196 (89.29%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAASAA 197
           LA+GPG    P A+ A
Sbjct: 181 LAKGPGGDVAPVAAPA 196

[Close]

BLAST of MS013681 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 320.9 bits (821), Expect = 7.7e-88
Identity = 175/200 (87.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGP--GEKQPPAASAAQP 199
           LAQGP  GE   PA +  QP
Sbjct: 181 LAQGPGGGETTTPAGAPQQP 200

[Close]

BLAST of MS013681 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 320.9 bits (821), Expect = 7.7e-88
Identity = 175/197 (88.83%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAASAAQ 198
           LA+GPG   P AA  AQ
Sbjct: 181 LAKGPGGDIPAAAPPAQ 197

[Close]

BLAST of MS013681 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-13
Identity = 68/142 (47.89%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRAR      RK RH+GYG  K T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIAR 177
            + YHDM+MKVKG V+KNK VLMES+HKS                       SRERK + 
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFSG 114

Query: 178 REERLAQGP-GEKQPPAASAAQ 198
            E RLA  P GEK    ASA Q
Sbjct: 127 SEMRLALEPEGEK---TASAPQ 114

The following BLAST results are available for this feature:

BLAST of MS013681 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153659.1	5.3e-99	98.54	60S ribosomal protein L19-1-like [Momordica charantia]	[more]
XP_038896810.1	1.0e-97	97.09	60S ribosomal protein L19-1-like [Benincasa hispida]	[more]
XP_008451555.1	2.9e-97	96.60	PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo] >KAA0067979.1 60S rib...	[more]
XP_004136019.1	2.9e-97	96.60	60S ribosomal protein L19-1 [Cucumis sativus] >KAE8646346.1 hypothetical protein...	[more]
XP_023004655.1	7.2e-96	96.12	60S ribosomal protein L19-1-like [Cucurbita maxima]	[more]

BLAST of MS013681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX2	9.8e-88	89.29	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
Q9LUQ6	1.1e-86	87.50	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
P49693	1.1e-86	88.83	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
Q3T0W9	9.3e-62	69.61	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]
D0VWQ5	9.3e-62	69.61	60S ribosomal protein L19 OS=Canis lupus familiaris OX=9615 GN=RPL19 PE=1 SV=1	[more]

BLAST of MS013681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJQ5	2.6e-99	98.54	Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111021109 PE=3 SV=1	[more]
A0A5A7VS85	1.4e-97	96.60	Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A1S3BSJ2	1.4e-97	96.60	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1	[more]
A0A6J1KV74	3.5e-96	96.12	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111497884 PE=3 SV=1	[more]
A0A6J1H702	1.0e-95	95.63	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111460761 PE=3 SV=1	[more]

BLAST of MS013681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02780.1	7.0e-89	89.29	Ribosomal protein L19e family protein	[more]
AT3G16780.1	7.7e-88	87.50	Ribosomal protein L19e family protein	[more]
AT4G02230.1	7.7e-88	88.83	Ribosomal protein L19e family protein	[more]
AT4G16030.1	3.7e-13	47.89	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 2.0E-96 score: 336.4
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..145 e-value: 1.4E-64 score: 216.5
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.426813
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..189 e-value: 1.2E-58 score: 199.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	PANTHER	PTHR10722:SF26	RIBOSOMAL PROTEIN L19	coord: 1..200
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 2..56 e-value: 3.2E-31 score: 108.9
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..200
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..167 e-value: 5.45833E-81 score: 236.478
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013681.1	MS013681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome