MS013395 (gene) Bitter gourd (TR) v1

Overview


Name	MS013395
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor bHLH52-like
Location	scaffold402: 945660 .. 946535 (-)
RNA-Seq Expression	MS013395
Synteny	MS013395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCTCAGCTTTTACTCCAATTTCTGCTCCGATCCCCTGTTTTTCTCCCCCGACTTCTCGCCGGAGCTTTTCTATCTAACCCCAACTCCGCCGCAGCTCCTCCCCGACCCCGCCTTCGATTACTTCCCCACTGCCGTCGACGACACTGTCTTTTTCCCGCCGTTACTCGACGACGACGCCTCGTCGTCGTTCTTCTTCTCCGACGTCTATCCCTACTTCTCTGCTCCTGCCATTGCCGATTGCTTCGTTCCCGTCTCCACCGAATTCTTCCCGTCTGATGAATTTGAGCTACATTGCCCCAAACGCCAGAGGATCGTGTCGGAGCAGAATTTCGGTTACGGTGGCAGTGGCGGTGGCGGAGGTGGAGGATACTTTCCTCCTCTGCCGGAGTTGCTTCCGGTGCCGTGGGACGACAAAATGAACAATGCTGAAACGATGAATGCTGGCACTTGCTTGAAGAGTAAACCGTCCCCGAGTAACACGTTATCGGCGCAGACGATCGCAGCCCGGGAGCGGCGGAGGAAGATAACGGCAAAGACGCAGGAGCTCGGTGAGCTGATTCCGGGGGGGAACAAGATGAACACTGCTGAAATGCTGCACTCTGCATTCAAATATGTCAAATTCTTGCAAGCCCAAGTGGGGATTCTGCAACTTATGCAAGAAACAGAGCAAGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAGGAGCTGCAGATTCTTGAATCCGCCATGGTTCAAGAGAAGCTCTACGCAGAAGAAAAGTGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTGCAAATTTCCCAGAGATTCAATCGCATCCGTCCATTTTCAACTCCATCAATCAGATGCTTCATATGCAG

mRNA sequence

ATGGCGGCTCTCAGCTTTTACTCCAATTTCTGCTCCGATCCCCTGTTTTTCTCCCCCGACTTCTCGCCGGAGCTTTTCTATCTAACCCCAACTCCGCCGCAGCTCCTCCCCGACCCCGCCTTCGATTACTTCCCCACTGCCGTCGACGACACTGTCTTTTTCCCGCCGTTACTCGACGACGACGCCTCGTCGTCGTTCTTCTTCTCCGACGTCTATCCCTACTTCTCTGCTCCTGCCATTGCCGATTGCTTCGTTCCCGTCTCCACCGAATTCTTCCCGTCTGATGAATTTGAGCTACATTGCCCCAAACGCCAGAGGATCGTGTCGGAGCAGAATTTCGGTTACGGTGGCAGTGGCGGTGGCGGAGGTGGAGGATACTTTCCTCCTCTGCCGGAGTTGCTTCCGGTGCCGTGGGACGACAAAATGAACAATGCTGAAACGATGAATGCTGGCACTTGCTTGAAGAGTAAACCGTCCCCGAGTAACACGTTATCGGCGCAGACGATCGCAGCCCGGGAGCGGCGGAGGAAGATAACGGCAAAGACGCAGGAGCTCGGTGAGCTGATTCCGGGGGGGAACAAGATGAACACTGCTGAAATGCTGCACTCTGCATTCAAATATGTCAAATTCTTGCAAGCCCAAGTGGGGATTCTGCAACTTATGCAAGAAACAGAGCAAGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAGGAGCTGCAGATTCTTGAATCCGCCATGGTTCAAGAGAAGCTCTACGCAGAAGAAAAGTGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTGCAAATTTCCCAGAGATTCAATCGCATCCGTCCATTTTCAACTCCATCAATCAGATGCTTCATATGCAG

Coding sequence (CDS)

ATGGCGGCTCTCAGCTTTTACTCCAATTTCTGCTCCGATCCCCTGTTTTTCTCCCCCGACTTCTCGCCGGAGCTTTTCTATCTAACCCCAACTCCGCCGCAGCTCCTCCCCGACCCCGCCTTCGATTACTTCCCCACTGCCGTCGACGACACTGTCTTTTTCCCGCCGTTACTCGACGACGACGCCTCGTCGTCGTTCTTCTTCTCCGACGTCTATCCCTACTTCTCTGCTCCTGCCATTGCCGATTGCTTCGTTCCCGTCTCCACCGAATTCTTCCCGTCTGATGAATTTGAGCTACATTGCCCCAAACGCCAGAGGATCGTGTCGGAGCAGAATTTCGGTTACGGTGGCAGTGGCGGTGGCGGAGGTGGAGGATACTTTCCTCCTCTGCCGGAGTTGCTTCCGGTGCCGTGGGACGACAAAATGAACAATGCTGAAACGATGAATGCTGGCACTTGCTTGAAGAGTAAACCGTCCCCGAGTAACACGTTATCGGCGCAGACGATCGCAGCCCGGGAGCGGCGGAGGAAGATAACGGCAAAGACGCAGGAGCTCGGTGAGCTGATTCCGGGGGGGAACAAGATGAACACTGCTGAAATGCTGCACTCTGCATTCAAATATGTCAAATTCTTGCAAGCCCAAGTGGGGATTCTGCAACTTATGCAAGAAACAGAGCAAGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAGGAGCTGCAGATTCTTGAATCCGCCATGGTTCAAGAGAAGCTCTACGCAGAAGAAAAGTGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTGCAAATTTCCCAGAGATTCAATCGCATCCGTCCATTTTCAACTCCATCAATCAGATGCTTCATATGCAG

Protein sequence

MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ

Homology

[Close]

BLAST of MS013395 vs. NCBI nr
Match: XP_022142603.1 (transcription factor bHLH53-like [Momordica charantia])

HSP 1 Score: 560.5 bits (1443), Expect = 8.8e-156
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDD 60
           MAALSFYSNFCSDPLFFSPDFSPELFYLTPT PQLLPDPAFDYFPTAVD+TVFFPPLLDD
Sbjct: 1   MAALSFYSNFCSDPLFFSPDFSPELFYLTPTLPQLLPDPAFDYFPTAVDNTVFFPPLLDD 60

Query: 61  DASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGG 120
           DASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGG
Sbjct: 61  DASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGG 120

Query: 121 GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITA 180
           GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSK SPSNTLSAQTIAARERRRKITA
Sbjct: 121 GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKQSPSNTLSAQTIAARERRRKITA 180

Query: 181 KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEE 240
           KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVK EE+EEEEETEE
Sbjct: 181 KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVK-EEKEEEEETEE 240

Query: 241 LQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ 293
           LQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ
Sbjct: 241 LQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ 291

[Close]

BLAST of MS013395 vs. NCBI nr
Match: XP_023520229.1 (transcription factor bHLH52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 2.6e-99
Identity = 217/311 (69.77%), Postives = 236/311 (75.88%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVF 60
           MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY P AVD +VF
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHL--PPPQLLPDPAFDYLPAAVDHSVF 60

Query: 61  FP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVS 120
           FP    P  DD   S F FSDVYPYF  PA+ D FVPVS EFFP DEFE +CPKRQR+V 
Sbjct: 61  FPTATAPFFDD--VSPFVFSDVYPYFPTPAV-DSFVPVSAEFFPCDEFEFYCPKRQRVVM 120

Query: 121 EQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKS--------KPS 180
           EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK          PS
Sbjct: 121 EQSFCYGGGGGNVGGDGGYF-PLPEFFSDQWDGRLGNAEMMNKGDCLKGTLTPAPLPSPS 180

Query: 181 P-SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGIL 240
           P SN LSAQTIAARERRRKITAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV IL
Sbjct: 181 PSSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAIL 240

Query: 241 QLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSH 290
           Q+ QETEQ   E+E+E+ ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+
Sbjct: 241 QVKQETEQ---EQEQEQTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSN 300

[Close]

BLAST of MS013395 vs. NCBI nr
Match: KAG6583823.1 (Transcription factor basic helix-loop-helix 52, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-99
Identity = 214/307 (69.71%), Postives = 233/307 (75.90%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVF 60
           MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY P AVD +VF
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHL--PPPQLLPDPAFDYLPAAVDHSVF 60

Query: 61  FP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVS 120
           FP    P  +D   S F FSDVYPY   PA+ D FVPVS EFFP DEFE +CPKRQR+V 
Sbjct: 61  FPTATAPFFND--VSPFVFSDVYPYLPTPAV-DSFVPVSAEFFPCDEFEFYCPKRQRVVM 120

Query: 121 EQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP---SNTL 180
           EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK   +P   SN L
Sbjct: 121 EQSFCYGGGGGNVGGDGGYF-PLPEFFSDQWDGRLGNAELMNKGDCLKGTRTPAPSSNNL 180

Query: 181 SAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQET 240
           SAQTIAARERRRKITAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+ QET
Sbjct: 181 SAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQET 240

Query: 241 EQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNS 292
           EQ     E+E  ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+PSI NS
Sbjct: 241 EQ-----EQEHTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPSILNS 296

[Close]

BLAST of MS013395 vs. NCBI nr
Match: XP_038894685.1 (transcription factor bHLH52 [Benincasa hispida])

HSP 1 Score: 370.9 bits (951), Expect = 9.9e-99
Identity = 219/318 (68.87%), Postives = 243/318 (76.42%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPL-------FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTV 60
           MAAL+FYSNF SDP        +FSP+FSP+L Y    PPQLL DP AFDY    VDD+V
Sbjct: 1   MAALTFYSNFYSDPSSYYHQFHYFSPEFSPDLCYF--PPPQLLHDPIAFDY----VDDSV 60

Query: 61  FFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIV 120
           F+P    P  DD  +  F FSD YPYFS PA+ D F+PVS EFFP DEFE HCPKRQR V
Sbjct: 61  FYPTTAAPFFDD--AFPFLFSDAYPYFSTPAV-DEFLPVSPEFFPCDEFEFHCPKRQRAV 120

Query: 121 SEQNF----GYGGSGG--GGGGGYFPPLP------ELLPVPWDDKMNNAETMNAGTCLKS 180
            EQ+F    G GG GG  GGGGGYFPP P      EL    WD +M+NAE MN G CLK+
Sbjct: 121 LEQSFRCGDGGGGGGGNVGGGGGYFPPPPTMTMTSELFSSAWDGRMDNAEMMNDGGCLKT 180

Query: 181 KPSP----SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQ 240
           KP+P    SN LSAQTIAARERRRKITAKTQELGEL+PGG+KMNTAEML+SAFKYVKFLQ
Sbjct: 181 KPTPVPLSSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQ 240

Query: 241 AQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANF 291
           AQV ILQL QETEQ    E+E+EEETE+L+ILES M+QEKLY+EEKCLVPKGFVQNLANF
Sbjct: 241 AQVAILQLKQETEQ----EQEQEEETEDLRILESTMIQEKLYSEEKCLVPKGFVQNLANF 300

[Close]

BLAST of MS013395 vs. NCBI nr
Match: XP_022927111.1 (transcription factor bHLH52-like [Cucurbita moschata])

HSP 1 Score: 370.9 bits (951), Expect = 9.9e-99
Identity = 215/311 (69.13%), Postives = 233/311 (74.92%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVF 60
           MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY   AVD +VF
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHL--PPPQLLPDPAFDYLHAAVDHSVF 60

Query: 61  FP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVS 120
           FP    P  DD   S F FSDVYPYF  PA+ D FVPVS EFFP DEFE +CPKRQR+V 
Sbjct: 61  FPTATAPFFDD--VSPFVFSDVYPYFPTPAV-DSFVPVSAEFFPCDEFEFYCPKRQRVVM 120

Query: 121 EQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP------- 180
           EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK   +P       
Sbjct: 121 EQSFCYGGGGGNVGGDGGYF-PLPEFFSDQWDGRLGNAELMNKGDCLKGTLTPAPLPAPS 180

Query: 181 SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQL 240
           SN LSAQTIAARERRRKITAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+
Sbjct: 181 SNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQV 240

Query: 241 MQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPS 292
            QETEQ     E+E  ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+PS
Sbjct: 241 KQETEQ-----EQERTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPS 300

[Close]

BLAST of MS013395 vs. ExPASy Swiss-Prot
Match: Q84RD0 (Transcription factor bHLH53 OS=Arabidopsis thaliana OX=3702 GN=BHLH53 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.8e-26
Identity = 111/299 (37.12%), Postives = 144/299 (48.16%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDD 60
           M  LS++ N+   P+     F PE+  + P            +F  +     F  PL  +
Sbjct: 3   MDCLSYFFNY-DPPVQLQDCFIPEMDMIIPETD--------SFFFQSQPQLEFHQPLFQE 62

Query: 61  DASSSFFFSDVYPYFSAPAIADCFVP-VSTEFFPSD---EFELHCPKRQRIV-SEQNFGY 120
           +A S   F      F +P   + F+P    E F      +F L  PKRQR+V S  N   
Sbjct: 63  EAPSQTHFDPFCDQFLSP--QEIFLPNPKNEIFNETHDLDFFLPTPKRQRLVNSSYNCNT 122

Query: 121 GGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLK-----SKPSPSNTLSAQTIA 180
                     +F P  +   VP           +     K        S   TLS+Q+IA
Sbjct: 123 QNHFQSRNPNFFDPFGDTDFVPESCTFQEFRVPDFSLAFKVGRGDQDDSKKPTLSSQSIA 182

Query: 181 ARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEE 240
           AR RRR+I  KT ELG+LIPGGNK+NTAEM  +A KYVKFLQ+QVGILQLMQ T   K+ 
Sbjct: 183 ARGRRRRIAEKTHELGKLIPGGNKLNTAEMFQAAAKYVKFLQSQVGILQLMQTT---KKG 242

Query: 241 EEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML 290
               + ET+ L  LES  +QEKL  EE CLVP   VQ+L     I   P+I   IN++L
Sbjct: 243 SSNVQMETQYL--LESQAIQEKLSTEEVCLVPCEMVQDLTTEETICRTPNISREINKLL 285

[Close]

BLAST of MS013395 vs. ExPASy Swiss-Prot
Match: Q9SA82 (Transcription factor bHLH52 OS=Arabidopsis thaliana OX=3702 GN=BHLH52 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-21
Identity = 96/257 (37.35%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 56  PLLDDDA-SSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFEL----------HCPKR 115
           PL  D+A S S F  D Y +F      + F+P    F PS +  +          H PK 
Sbjct: 19  PLYPDEALSPSLFGFDHYDHF-----YESFLPSQEIFLPSPKTRVFNESQELDSFHTPKH 78

Query: 116 QRIVSEQNFGYGGSGGGGGGGYFPPLPE---LLPVPWDDKMNNAE--------TMNAGTC 175
           Q+++ + +F +           F P PE   LL     +  N ++        T   G  
Sbjct: 79  QKLI-DSSFHFNSHDP------FSPSPESNYLLDSYITEASNISKFQAPDFSSTFKVG-W 138

Query: 176 LKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQA 235
            +   +    LSAQ+IAAR+RRR+IT KTQELG+LIPG  K NTAEM ++A KYVKFLQA
Sbjct: 139 TEQGDTKKRELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQA 198

Query: 236 QVGILQLMQETEQVKEEEEEEEEETEELQ-ILESAMVQEKLYAEEKCLVPKGFVQNLANF 290
           Q+ ILQL    +Q K +  +  +   E+Q +L S  +QEKL  EE C+VP+  VQ L   
Sbjct: 199 QIEILQL----KQTKMQTLDSSKVGREMQFLLGSQEIQEKLSTEEVCVVPREMVQVLKAE 258

[Close]

BLAST of MS013395 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.4e-08
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 148 MNAGTCLKSKPSPSN---TLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSA 207
           +N G  +  KP   N   +   QT+AAR+RR +I+ K + L  L+PGG KM+TA ML  A
Sbjct: 258 VNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEA 317

Query: 208 FKYVKFLQAQVGILQ 220
             Y+KFL+AQV  L+
Sbjct: 318 ANYLKFLRAQVKALE 332

[Close]

BLAST of MS013395 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 56.6 bits (135), Expect = 5.4e-07
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 167 QTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ 220
           QT+ AR RR +I+ K + L  ++PGG KM+TA ML  A +Y KFL+ QV ILQ
Sbjct: 123 QTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of MS013395 vs. ExPASy Swiss-Prot
Match: Q7XAQ6 (Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-07
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 155 KSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQ 214
           + +P    +   Q++AARERR +I+ + + L  L+PGG+KM+T  ML  A  YVKFL+AQ
Sbjct: 33  RRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQ 92

Query: 215 VGILQ--LMQETE 226
           V + Q  L+Q  E
Sbjct: 93  VTLHQAALVQHEE 105

[Close]

BLAST of MS013395 vs. ExPASy TrEMBL
Match: A0A6J1CNN4 (transcription factor bHLH53-like OS=Momordica charantia OX=3673 GN=LOC111012679 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.3e-156
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDD 60
           MAALSFYSNFCSDPLFFSPDFSPELFYLTPT PQLLPDPAFDYFPTAVD+TVFFPPLLDD
Sbjct: 1   MAALSFYSNFCSDPLFFSPDFSPELFYLTPTLPQLLPDPAFDYFPTAVDNTVFFPPLLDD 60

Query: 61  DASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGG 120
           DASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGG
Sbjct: 61  DASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQNFGYGGSGG 120

Query: 121 GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITA 180
           GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSK SPSNTLSAQTIAARERRRKITA
Sbjct: 121 GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKQSPSNTLSAQTIAARERRRKITA 180

Query: 181 KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEE 240
           KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVK EE+EEEEETEE
Sbjct: 181 KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVK-EEKEEEEETEE 240

Query: 241 LQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ 293
           LQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ
Sbjct: 241 LQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ 291

[Close]

BLAST of MS013395 vs. ExPASy TrEMBL
Match: A0A6J1EGS4 (transcription factor bHLH52-like OS=Cucurbita moschata OX=3662 GN=LOC111434050 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.8e-99
Identity = 215/311 (69.13%), Postives = 233/311 (74.92%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVF 60
           MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY   AVD +VF
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHL--PPPQLLPDPAFDYLHAAVDHSVF 60

Query: 61  FP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVS 120
           FP    P  DD   S F FSDVYPYF  PA+ D FVPVS EFFP DEFE +CPKRQR+V 
Sbjct: 61  FPTATAPFFDD--VSPFVFSDVYPYFPTPAV-DSFVPVSAEFFPCDEFEFYCPKRQRVVM 120

Query: 121 EQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP------- 180
           EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK   +P       
Sbjct: 121 EQSFCYGGGGGNVGGDGGYF-PLPEFFSDQWDGRLGNAELMNKGDCLKGTLTPAPLPAPS 180

Query: 181 SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQL 240
           SN LSAQTIAARERRRKITAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+
Sbjct: 181 SNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQV 240

Query: 241 MQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPS 292
            QETEQ     E+E  ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+PS
Sbjct: 241 KQETEQ-----EQERTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPS 300

[Close]

BLAST of MS013395 vs. ExPASy TrEMBL
Match: A0A6J1KJ69 (transcription factor bHLH52 OS=Cucurbita maxima OX=3661 GN=LOC111495708 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.4e-98
Identity = 216/314 (68.79%), Postives = 234/314 (74.52%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVF 60
           MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDP FDY P AVD +VF
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHL--PPPQLLPDPTFDYLPAAVDHSVF 60

Query: 61  FP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVS 120
           FP    P  DD   S F FSDVYPYF  PA+ D FVPVS EFFP DEFE +CPKRQR+V 
Sbjct: 61  FPTATAPFFDD--VSPFVFSDVYPYFPTPAV-DEFVPVSAEFFPCDEFEFYCPKRQRVVM 120

Query: 121 EQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKS----------K 180
           EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK            
Sbjct: 121 EQSFCYGGGGGNVGGEGGYF-PLPEFFSDQWDGRLGNAEMMNKGDCLKGTPTLVPLPLPS 180

Query: 181 PSP-SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVG 240
           PSP SN LSAQTIAARERRRKITAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV 
Sbjct: 181 PSPSSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVA 240

Query: 241 ILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQ 291
           ILQ+ QETEQ     E+E+ ETE+LQILES M+QEKLYAEEKCLVPKGFVQNLAN  EIQ
Sbjct: 241 ILQVKQETEQ-----EQEQTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLANSSEIQ 300

[Close]

BLAST of MS013395 vs. ExPASy TrEMBL
Match: A0A5A7U090 (Transcription factor bHLH52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00680 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.3e-90
Identity = 205/317 (64.67%), Postives = 238/317 (75.08%), Query Frame = 0


Query: 1   MAALSFYSNFCS-DPL----FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFF 60
           MAAL+F+SNF S DP     +FSP+FSP+L Y+   PP LL DP AF Y    VDD+VF+
Sbjct: 1   MAALTFHSNFYSPDPSSYFHYFSPEFSPDLSYV--PPPHLLSDPAAFPY----VDDSVFY 60

Query: 61  P---PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQ 120
           P    L  DDA   F FSD YPYFSAP++ D F+PVS++FFP DEFE HCPKRQR V EQ
Sbjct: 61  PAADTLFSDDA-FPFLFSDAYPYFSAPSV-DEFLPVSSQFFPFDEFEFHCPKRQRAVFEQ 120

Query: 121 NF-----------GYGGSGGGGGGGYF-PPLPELLPVPWDDKMNNAETMNAGTCLKSKPS 180
           +F           G GG G G G G+F PPL E    PWD +M+NAE  N   CLKS+PS
Sbjct: 121 SFCCGEGVGDGNVGGGGEGAGAGAGFFPPPLAEFFSGPWDSRMDNAEMTN--DCLKSQPS 180

Query: 181 P------SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQA 240
           P      SN LSAQTIAARERRRKIT KTQELGEL+PGG+KMNTAEML+SAFKYVKFLQA
Sbjct: 181 PAPPAPSSNNLSAQTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQA 240

Query: 241 QVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFP 291
           QV ILQL QETEQ ++E+E+E +ETE L+ILES ++QEKLY EEKCLVPKGF+QNLA+FP
Sbjct: 241 QVAILQLKQETEQ-EQEQEQEGQETENLKILESTLIQEKLYLEEKCLVPKGFIQNLADFP 300

[Close]

BLAST of MS013395 vs. ExPASy TrEMBL
Match: A0A1S3BEE9 (transcription factor bHLH52 OS=Cucumis melo OX=3656 GN=LOC103488727 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.3e-90
Identity = 205/317 (64.67%), Postives = 238/317 (75.08%), Query Frame = 0


Query: 1   MAALSFYSNFCS-DPL----FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFF 60
           MAAL+F+SNF S DP     +FSP+FSP+L Y+   PP LL DP AF Y    VDD+VF+
Sbjct: 1   MAALTFHSNFYSPDPSSYFHYFSPEFSPDLSYV--PPPHLLSDPAAFPY----VDDSVFY 60

Query: 61  P---PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSEQ 120
           P    L  DDA   F FSD YPYFSAP++ D F+PVS++FFP DEFE HCPKRQR V EQ
Sbjct: 61  PAADTLFSDDA-FPFLFSDAYPYFSAPSV-DEFLPVSSQFFPFDEFEFHCPKRQRAVFEQ 120

Query: 121 NF-----------GYGGSGGGGGGGYF-PPLPELLPVPWDDKMNNAETMNAGTCLKSKPS 180
           +F           G GG G G G G+F PPL E    PWD +M+NAE  N   CLKS+PS
Sbjct: 121 SFCCGEGVGDGNVGGGGEGAGAGAGFFPPPLAEFFSGPWDSRMDNAEMTN--DCLKSQPS 180

Query: 181 P------SNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQA 240
           P      SN LSAQTIAARERRRKIT KTQELGEL+PGG+KMNTAEML+SAFKYVKFLQA
Sbjct: 181 PAPPAPSSNNLSAQTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQA 240

Query: 241 QVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFP 291
           QV ILQL QETEQ ++E+E+E +ETE L+ILES ++QEKLY EEKCLVPKGF+QNLA+FP
Sbjct: 241 QVAILQLKQETEQ-EQEQEQEGQETENLKILESTLIQEKLYLEEKCLVPKGFIQNLADFP 300

[Close]

BLAST of MS013395 vs. TAIR 10
Match: AT2G34820.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.8e-27
Identity = 111/299 (37.12%), Postives = 144/299 (48.16%), Query Frame = 0


Query: 1   MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDD 60
           M  LS++ N+   P+     F PE+  + P            +F  +     F  PL  +
Sbjct: 3   MDCLSYFFNY-DPPVQLQDCFIPEMDMIIPETD--------SFFFQSQPQLEFHQPLFQE 62

Query: 61  DASSSFFFSDVYPYFSAPAIADCFVP-VSTEFFPSD---EFELHCPKRQRIV-SEQNFGY 120
           +A S   F      F +P   + F+P    E F      +F L  PKRQR+V S  N   
Sbjct: 63  EAPSQTHFDPFCDQFLSP--QEIFLPNPKNEIFNETHDLDFFLPTPKRQRLVNSSYNCNT 122

Query: 121 GGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLK-----SKPSPSNTLSAQTIA 180
                     +F P  +   VP           +     K        S   TLS+Q+IA
Sbjct: 123 QNHFQSRNPNFFDPFGDTDFVPESCTFQEFRVPDFSLAFKVGRGDQDDSKKPTLSSQSIA 182

Query: 181 ARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEE 240
           AR RRR+I  KT ELG+LIPGGNK+NTAEM  +A KYVKFLQ+QVGILQLMQ T   K+ 
Sbjct: 183 ARGRRRRIAEKTHELGKLIPGGNKLNTAEMFQAAAKYVKFLQSQVGILQLMQTT---KKG 242

Query: 241 EEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML 290
               + ET+ L  LES  +QEKL  EE CLVP   VQ+L     I   P+I   IN++L
Sbjct: 243 SSNVQMETQYL--LESQAIQEKLSTEEVCLVPCEMVQDLTTEETICRTPNISREINKLL 285

[Close]

BLAST of MS013395 vs. TAIR 10
Match: AT1G30670.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-22
Identity = 96/257 (37.35%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 56  PLLDDDA-SSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFEL----------HCPKR 115
           PL  D+A S S F  D Y +F      + F+P    F PS +  +          H PK 
Sbjct: 19  PLYPDEALSPSLFGFDHYDHF-----YESFLPSQEIFLPSPKTRVFNESQELDSFHTPKH 78

Query: 116 QRIVSEQNFGYGGSGGGGGGGYFPPLPE---LLPVPWDDKMNNAE--------TMNAGTC 175
           Q+++ + +F +           F P PE   LL     +  N ++        T   G  
Sbjct: 79  QKLI-DSSFHFNSHDP------FSPSPESNYLLDSYITEASNISKFQAPDFSSTFKVG-W 138

Query: 176 LKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQA 235
            +   +    LSAQ+IAAR+RRR+IT KTQELG+LIPG  K NTAEM ++A KYVKFLQA
Sbjct: 139 TEQGDTKKRELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQA 198

Query: 236 QVGILQLMQETEQVKEEEEEEEEETEELQ-ILESAMVQEKLYAEEKCLVPKGFVQNLANF 290
           Q+ ILQL    +Q K +  +  +   E+Q +L S  +QEKL  EE C+VP+  VQ L   
Sbjct: 199 QIEILQL----KQTKMQTLDSSKVGREMQFLLGSQEIQEKLSTEEVCVVPREMVQVLKAE 258

[Close]

BLAST of MS013395 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-09
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 148 MNAGTCLKSKPSPSN---TLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSA 207
           +N G  +  KP   N   +   QT+AAR+RR +I+ K + L  L+PGG KM+TA ML  A
Sbjct: 258 VNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEA 317

Query: 208 FKYVKFLQAQVGILQ 220
             Y+KFL+AQV  L+
Sbjct: 318 ANYLKFLRAQVKALE 332

[Close]

BLAST of MS013395 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 167 QTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ 220
           QT+ AR RR +I+ K + L  ++PGG KM+TA ML  A +Y KFL+ QV ILQ
Sbjct: 123 QTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of MS013395 vs. TAIR 10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6 )

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-08
Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 145 AETMNAGTCLKSKPSPSNT-LSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHS 204
           ++ +++G   K+KP P+ +    Q++AA+ RR +I+ + + L EL+P G K++   ML  
Sbjct: 183 SKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEK 242

Query: 205 AFKYVKFLQAQVGIL 219
           A  YVKFLQ QV +L
Sbjct: 243 AISYVKFLQVQVKVL 257

The following BLAST results are available for this feature:

BLAST of MS013395 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142603.1	8.8e-156	98.29	transcription factor bHLH53-like [Momordica charantia]	[more]
XP_023520229.1	2.6e-99	69.77	transcription factor bHLH52-like [Cucurbita pepo subsp. pepo]	[more]
KAG6583823.1	4.4e-99	69.71	Transcription factor basic helix-loop-helix 52, partial [Cucurbita argyrosperma ...	[more]
XP_038894685.1	9.9e-99	68.87	transcription factor bHLH52 [Benincasa hispida]	[more]
XP_022927111.1	9.9e-99	69.13	transcription factor bHLH52-like [Cucurbita moschata]	[more]

BLAST of MS013395 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84RD0	6.8e-26	37.12	Transcription factor bHLH53 OS=Arabidopsis thaliana OX=3702 GN=BHLH53 PE=2 SV=1	[more]
Q9SA82	3.0e-21	37.35	Transcription factor bHLH52 OS=Arabidopsis thaliana OX=3702 GN=BHLH52 PE=2 SV=1	[more]
Q8S3D2	6.4e-08	45.33	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	5.4e-07	52.83	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q7XAQ6	7.1e-07	43.84	Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=L...	[more]

BLAST of MS013395 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNN4	4.3e-156	98.29	transcription factor bHLH53-like OS=Momordica charantia OX=3673 GN=LOC111012679 ...	[more]
A0A6J1EGS4	4.8e-99	69.13	transcription factor bHLH52-like OS=Cucurbita moschata OX=3662 GN=LOC111434050 P...	[more]
A0A6J1KJ69	2.4e-98	68.79	transcription factor bHLH52 OS=Cucurbita maxima OX=3661 GN=LOC111495708 PE=4 SV=...	[more]
A0A5A7U090	5.3e-90	64.67	Transcription factor bHLH52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BEE9	5.3e-90	64.67	transcription factor bHLH52 OS=Cucumis melo OX=3656 GN=LOC103488727 PE=4 SV=1	[more]

BLAST of MS013395 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34820.1	4.8e-27	37.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G30670.1	2.1e-22	37.35	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	4.5e-09	45.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	3.8e-08	52.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G66470.1	5.0e-08	38.67	ROOT HAIR DEFECTIVE6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 217..247
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 31..284
None	No IPR available	PANTHER	PTHR16223:SF49	TRANSCRIPTION FACTOR BHLH52-RELATED	coord: 31..284
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 167..219 e-value: 5.52457E-18 score: 74.1399
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 168..217 e-value: 2.1E-8 score: 43.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 169..212 e-value: 1.1E-5 score: 25.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 162..211 score: 11.871027
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 165..246 e-value: 5.4E-10 score: 41.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 161..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013395.1	MS013395.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity