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MS013267 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACCGAAGCGATCTTCTCGTCAACAATTTTGTGGCAAATCGAAACTTAGATAATTACCTATTCAACAATCCGATAACGATTCTACATTGGAAACAGAGGTTCAAAATTATAAAGAGCGTCGGCTCTGCTATGCTCTATCTCCATGAAAGGTACAAACAGGTGGTGATTCTCAGAGGCGTGAATGCAAGT CACCGAAGCGATCTTCTCGTCAACAATTTTGTGGCAAATCGAAACTTAGATAATTACCTATTCAACAATCCGATAACGATTCTACATTGGAAACAGAGGTTCAAAATTATAAAGAGCGTCGGCTCTGCTATGCTCTATCTCCATGAAAGGTACAAACAGGTGGTGATTCTCAGAGGCGTGAATGCAAGT CACCGAAGCGATCTTCTCGTCAACAATTTTGTGGCAAATCGAAACTTAGATAATTACCTATTCAACAATCCGATAACGATTCTACATTGGAAACAGAGGTTCAAAATTATAAAGAGCGTCGGCTCTGCTATGCTCTATCTCCATGAAAGGTACAAACAGGTGGTGATTCTCAGAGGCGTGAATGCAAGT HRSDLLVNNFVANRNLDNYLFNNPITILHWKQRFKIIKSVGSAMLYLHERYKQVVILRGVNAS Homology
BLAST of MS013267 vs. NCBI nr
Match: XP_023545095.1 (L-type lectin-domain containing receptor kinase S.4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12 Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of MS013267 vs. NCBI nr
Match: XP_022950901.1 (L-type lectin-domain containing receptor kinase S.4-like [Cucurbita moschata]) HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12 Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of MS013267 vs. NCBI nr
Match: TYK23556.1 (L-type lectin-domain containing receptor kinase S.4-like [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS013267 vs. NCBI nr
Match: XP_008448160.1 (PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase S.4-like [Cucumis melo]) HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS013267 vs. NCBI nr
Match: KAA0032673.1 (L-type lectin-domain containing receptor kinase S.4-like [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS013267 vs. ExPASy Swiss-Prot
Match: O81291 (L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana OX=3702 GN=LECRK44 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.0e-11 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MS013267 vs. ExPASy Swiss-Prot
Match: Q9M345 (L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK42 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.1e-11 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of MS013267 vs. ExPASy Swiss-Prot
Match: Q9M2S4 (L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana OX=3702 GN=LECRKS4 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.5e-10 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of MS013267 vs. ExPASy Swiss-Prot
Match: O80939 (L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK41 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-10 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of MS013267 vs. ExPASy Swiss-Prot
Match: Q9FIF0 (Putative L-type lectin-domain containing receptor kinase II.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK22 PE=3 SV=3) HSP 1 Score: 60.8 bits (146), Expect = 6.2e-09 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS013267 vs. ExPASy TrEMBL
Match: A0A6J1GG34 (L-type lectin-domain containing receptor kinase S.4-like OS=Cucurbita moschata OX=3662 GN=LOC111453860 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12 Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of MS013267 vs. ExPASy TrEMBL
Match: A0A5A7SQK2 (L-type lectin-domain containing receptor kinase S.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00620 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS013267 vs. ExPASy TrEMBL
Match: A0A5D3DIS9 (L-type lectin-domain containing receptor kinase S.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00640 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS013267 vs. ExPASy TrEMBL
Match: A0A1S3BJN2 (LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase S.4-like OS=Cucumis melo OX=3656 GN=LOC103490441 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS013267 vs. ExPASy TrEMBL
Match: A0A0A0L2A2 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296250 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.1e-12 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS013267 vs. TAIR 10
Match: AT4G02420.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MS013267 vs. TAIR 10
Match: AT3G53810.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 67.8 bits (164), Expect = 3.6e-12 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of MS013267 vs. TAIR 10
Match: AT3G55550.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 65.5 bits (158), Expect = 1.8e-11 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of MS013267 vs. TAIR 10
Match: AT2G37710.1 (receptor lectin kinase ) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-11 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of MS013267 vs. TAIR 10
Match: AT5G59270.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 60.8 bits (146), Expect = 4.4e-10 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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