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MS013217 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGGTCAAAATTCTCAGAGATCCAACGGCATACACTCACACTCAAGGTTGGAGTTAAGGCCTCGTTCTCTCTCTGTTTGGCGAAGCAGACGAGGCATAAGGCGATTTCTGCCAGAGCCGATGAGATTCTTGTCAATCGATTCCTCGATCGGGAGAGGTACAACTTTGAGCGGACAACGACTATCGAGCTCATTTGCCGA GTGGTCAAAATTCTCAGAGATCCAACGGCATACACTCACCTCAAGGTTGGAGTTAAGGCCTCGTTCTCTCTCTGTTTGGCGAAGCAGACGAGGCATAAGGCGATTTCTGCCAGAGCCGATGAGATTCTTGTCAATCGATTCCTCGATCGGGAGAGGTACAACTTTGAGCGGACAACGACTATCGAGCTCATTTGCCGA GTGGTCAAAATTCTCAGAGATCCAACGGCATACACTCACCTCAAGGTTGGAGTTAAGGCCTCGTTCTCTCTCTGTTTGGCGAAGCAGACGAGGCATAAGGCGATTTCTGCCAGAGCCGATGAGATTCTTGTCAATCGATTCCTCGATCGGGAGAGGTACAACTTTGAGCGGACAACGACTATCGAGCTCATTTGCCGA VVKILRDPTAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERTTTIELICR Homology
BLAST of MS013217 vs. NCBI nr
Match: XP_004140703.1 (U-box domain-containing protein 26 [Cucumis sativus] >KGN57520.1 hypothetical protein Csa_011013 [Cucumis sativus]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. NCBI nr
Match: XP_038875248.1 (U-box domain-containing protein 26-like isoform X1 [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. NCBI nr
Match: XP_038875257.1 (U-box domain-containing protein 26-like isoform X2 [Benincasa hispida] >XP_038875267.1 U-box domain-containing protein 26-like isoform X3 [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. NCBI nr
Match: XP_008456137.1 (PREDICTED: U-box domain-containing protein 26-like [Cucumis melo] >KAA0037126.1 U-box domain-containing protein 26-like [Cucumis melo var. makuwa] >TYK13948.1 U-box domain-containing protein 26-like [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. NCBI nr
Match: XP_022981075.1 (U-box domain-containing protein 26-like [Cucurbita maxima]) HSP 1 Score: 85.9 bits (211), Expect = 1.4e-13 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. ExPASy Swiss-Prot
Match: Q9FXA4 (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 7.2e-08 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of MS013217 vs. ExPASy Swiss-Prot
Match: Q9LT79 (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.1e-07 Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of MS013217 vs. ExPASy TrEMBL
Match: A0A5A7T4S1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001500 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.3e-14 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. ExPASy TrEMBL
Match: A0A0A0L6F8 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G203270 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.3e-14 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. ExPASy TrEMBL
Match: A0A1S3C380 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103496167 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.3e-14 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. ExPASy TrEMBL
Match: A0A6J1IYF7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111480329 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.0e-14 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. ExPASy TrEMBL
Match: A0A6J1FSF9 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111447739 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.0e-14 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS013217 vs. TAIR 10
Match: AT1G49780.1 (plant U-box 26 ) HSP 1 Score: 57.4 bits (137), Expect = 5.1e-09 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of MS013217 vs. TAIR 10
Match: AT3G19380.1 (plant U-box 25 ) HSP 1 Score: 54.3 bits (129), Expect = 4.3e-08 Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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