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MS013208 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATCAAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGTAATCTCTTTGCCTTTTGAGCATTTTAAAATTACTGAGTGCCTTTAGAGTTGAATAACTAAAATTATCTCAAGTGAATGGCTGATACTTTGCCTCGACAGTACTGCACATGATTTGTTTCCTCGACAGGAGTGAATTTAGAAGTCAAAGGCATACTAATGCTCGAGCTTCTGCTCCCCTTTTCCTAGTTCCATGAAAACAATGTTTGGCTTGGATGTGTTTAGCATATGGCTAGTGTTCCGTTTGAGCGAAGATCAAACTTTTCTTTCGAGTATGATTGGGTTCTTGTGGTGGTAGAATCTGGTCAACCGGGTGTACTAATTTCCAGCATCTTGTGAACCTTACTTCCCTTATGTTTTTTGCAATTGTCATACTTATTCCTCGCTTTTCGGAGAGTGATAGTAGAGGGTGGGTGTCTTGGATGAGTTCAAGTTTCTCAACGTTTCCTTCTTAATATTTAAGTTCAGTGAGACTTGTTTTCTCAATATACTCTGTCACCACACCTCATTTGGCTGTGTACATTATATTTGAATAACTTCATGTTTGCATTTACAGGGTTGGCAAATGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGGTATGCAAAATTTCATAAATGTACTCATTTTTGTCCATCACTTTTTACATTAGCTCTGGGGTATGTTTATTTATTTATTTTTTCTCTTTGCACTCTTTTTCTTCGATATTTCATCTCGACAAATGGAACTTTTTTTTCCTCTTTATGCAGACTAAGAGGTCTATGCAAAGTAACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGGTAAGTTCTTAACAATTTGAGAAATTTGAAGCATCTCGTCTCGTCCGACCCATCCATTTGTTCTTCAACTCATTGTATGTGGCTCTGTTAATGTATAGCTGCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGTCTCTCTCTCTCTCATTAGTTGATTCATTTAGTTATTAGGAGCATGTATAACTTATATCTCAAGCCAACATTTTATATATATTAGCTGAGCATGCAATTTGCCTTTGACCTAGTTTCAATGAGTTTTTTTGCTTGAACGGAAATTGCTAATGAAATTTGTTAGTAAAACTATAAGTTTGGTACTAGTCCATCTGTACTTATGTAGATTGAACTTTTAATCTTGTATCTAATAGATCTATATCGTTACCGGGTAGATATAAAATTGAAAGTTCTAATAGAAACTCAGTTAGAAACTTCTCATTACCATTTAAGTACCAAATAAAACCAAATTTGTAATTTAACCAAGGATTTTTCAAGAGTGAAAATTTGAGGGTAAAATTGTAACTTTCAAAAGGTTAAAAGGCAGAATTGAATTTAACTACATATTTTAAGGGTATTTTGTATAATTTAGCTTTAAGAGTTTTTCAATCTTTTAATAGCCATCCTCTAAACTTTCCAGGCAGGTGTTCCACGATGGACTCGAGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCAAAACATGGTACA CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATCAAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGGTTGGCAAATGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGACTAAGAGGTCTATGCAAAGTAACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGCTGCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGCAGGTGTTCCACGATGGACTCGAGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCAAAACATGGTACA CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATCAAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGGTTGGCAAATGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGACTAAGAGGTCTATGCAAAGTAACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGCTGCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGCAGGTGTTCCACGATGGACTCGAGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCAAAACATGGTACA QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPAKHGT Homology
BLAST of MS013208 vs. NCBI nr
Match: XP_022148183.1 (protein ABA DEFICIENT 4, chloroplastic [Momordica charantia] >XP_022148184.1 protein ABA DEFICIENT 4, chloroplastic [Momordica charantia]) HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121 Identity = 222/224 (99.11%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of MS013208 vs. NCBI nr
Match: XP_022983661.1 (protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima] >XP_022983662.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 395.6 bits (1015), Expect = 2.9e-106 Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 0
BLAST of MS013208 vs. NCBI nr
Match: XP_022935036.1 (protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata] >XP_022935038.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata] >XP_022935039.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata]) HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-105 Identity = 201/228 (88.16%), Postives = 212/228 (92.98%), Query Frame = 0
BLAST of MS013208 vs. NCBI nr
Match: KAG6581180.1 (Protein ABA DEFICIENT 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104 Identity = 200/228 (87.72%), Postives = 212/228 (92.98%), Query Frame = 0
BLAST of MS013208 vs. NCBI nr
Match: XP_008461596.1 (PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo] >XP_008461597.1 PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104 Identity = 196/227 (86.34%), Postives = 209/227 (92.07%), Query Frame = 0
BLAST of MS013208 vs. ExPASy Swiss-Prot
Match: Q8LFP9 (Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 9.7e-65 Identity = 124/203 (61.08%), Postives = 157/203 (77.34%), Query Frame = 0
BLAST of MS013208 vs. ExPASy Swiss-Prot
Match: Q5ZEG0 (Protein MAO HUZI 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MHZ4 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 6.1e-59 Identity = 117/215 (54.42%), Postives = 154/215 (71.63%), Query Frame = 0
BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A6J1D387 (protein ABA DEFICIENT 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016919 PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121 Identity = 222/224 (99.11%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A6J1IZZ7 (protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482208 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106 Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 0
BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A6J1F3F1 (protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442024 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.0e-105 Identity = 201/228 (88.16%), Postives = 212/228 (92.98%), Query Frame = 0
BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A1S3CFJ8 (protein ABA DEFICIENT 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500161 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 7.6e-105 Identity = 196/227 (86.34%), Postives = 209/227 (92.07%), Query Frame = 0
BLAST of MS013208 vs. ExPASy TrEMBL
Match: A0A0A0LCH1 (FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G280950 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 7.9e-102 Identity = 190/225 (84.44%), Postives = 205/225 (91.11%), Query Frame = 0
BLAST of MS013208 vs. TAIR 10
Match: AT1G67080.1 (abscisic acid (aba)-deficient 4 ) HSP 1 Score: 248.1 bits (632), Expect = 6.9e-66 Identity = 124/203 (61.08%), Postives = 157/203 (77.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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