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MS013207 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGTTATAGAAACTGATAACTCTTTGACCTTATAGCCGAACATATATTAAAGGCTAAATATATGTTTTAGTCTAACATATTTTGGTGTTTCTTCAATTAGTATAACAAGTTTCAATTTAGTCCGTTGTTTTTTAACACATTTAAGTTGATGTGACTGATTATAATTTAGTGAGTTTAGAGATGAACTAAAAACTTCTTTCTTAGATGACCAATGCCATGTAAGCTTATCATCCACTAACTTTAACATTCATTGACCAAAGGGTGTAATTGAGAAATGTTAAAACATTAGGAACTAAATTGTAAAATATCCAAAAATTAAGGGCTAAAACATATATTTCTGAAATTGATTGTGTCTTGTCCATTTACTAAAAGCTTAGGAGAGATTTAAATTTGTCACAGCTTTTGATCGAAGTAAAAGCATCCTTTTTTGGTATTTCACATGTTTTCAGTTGCTTATAGAAAGTCTTTTGTGTTTCACTTCCTTCCAATTGTTTGTCTCTTGAAGGTTTGTTGTCTAGATCTCAGACTTTCTTTTTCGTACGTCTTTACAATATGATTGATTGTATCCTTGAATTATGCCATAGGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCT ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCT ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCT MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA Homology
BLAST of MS013207 vs. NCBI nr
Match: XP_022148186.1 (uncharacterized protein LOC111016920 [Momordica charantia]) HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91 Identity = 177/190 (93.16%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of MS013207 vs. NCBI nr
Match: KAA0063383.1 (uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa] >TYK11645.1 uncharacterized protein E5676_scaffold828G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 323.9 bits (829), Expect = 9.0e-85 Identity = 169/190 (88.95%), Postives = 172/190 (90.53%), Query Frame = 0
BLAST of MS013207 vs. NCBI nr
Match: XP_011651371.1 (uncharacterized protein LOC101218020 [Cucumis sativus] >XP_031739033.1 uncharacterized protein LOC101218020 [Cucumis sativus] >KGN57754.1 hypothetical protein Csa_011219 [Cucumis sativus]) HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84 Identity = 168/190 (88.42%), Postives = 172/190 (90.53%), Query Frame = 0
BLAST of MS013207 vs. NCBI nr
Match: XP_008461589.1 (PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 2.6e-84 Identity = 168/190 (88.42%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of MS013207 vs. NCBI nr
Match: XP_038897455.1 (uncharacterized protein LOC120085511 [Benincasa hispida]) HSP 1 Score: 317.8 bits (813), Expect = 6.5e-83 Identity = 166/190 (87.37%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A6J1D4M2 (uncharacterized protein LOC111016920 OS=Momordica charantia OX=3673 GN=LOC111016920 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 6.3e-92 Identity = 177/190 (93.16%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A5A7V5L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00090 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.4e-85 Identity = 169/190 (88.95%), Postives = 172/190 (90.53%), Query Frame = 0
BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A0A0L9U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G280930 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.4e-85 Identity = 168/190 (88.42%), Postives = 172/190 (90.53%), Query Frame = 0
BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A1S3CF27 (uncharacterized protein LOC103500158 OS=Cucumis melo OX=3656 GN=LOC103500158 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84 Identity = 168/190 (88.42%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A6J1F3X6 (uncharacterized protein LOC111442160 OS=Cucurbita moschata OX=3662 GN=LOC111442160 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 8.8e-78 Identity = 156/190 (82.11%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of MS013207 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 179.9 bits (455), Expect = 2.0e-45 Identity = 110/198 (55.56%), Postives = 136/198 (68.69%), Query Frame = 0
BLAST of MS013207 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 162.5 bits (410), Expect = 3.2e-40 Identity = 103/197 (52.28%), Postives = 120/197 (60.91%), Query Frame = 0
BLAST of MS013207 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33 Identity = 95/198 (47.98%), Postives = 115/198 (58.08%), Query Frame = 0
BLAST of MS013207 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 115.2 bits (287), Expect = 5.9e-26 Identity = 81/193 (41.97%), Postives = 105/193 (54.40%), Query Frame = 0
BLAST of MS013207 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 115.2 bits (287), Expect = 5.9e-26 Identity = 81/193 (41.97%), Postives = 105/193 (54.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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