MS013159 (gene) Bitter gourd (TR) v1

Overview


Name	MS013159
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Profilin
Location	scaffold459: 783514 .. 785028 (-)
RNA-Seq Expression	MS013159
Synteny	MS013159

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGACGGCCAACATCTCAAAGCCGCTGCCATTGTCGGCAACGACGGTACTGTTTGGGCCCAGAGCGCCGACTTCCCCAAGGTTTTCCCCTGTTTTTTCCTGATTCAATTACGTTCTCAAATGGAGCATTTCTTCGGATCTTTAGTTTTTTTTCTTTTTTTTTTCCCTCTGCTATTGCTGTTGTTGTTCTTCTTGCATTTTAGTTCTCGGAGGCGTACGTTATGATCCGAAAGGCTCCACGATTTCTTGTTTTTCGGATATAATGAGCGATGTATTTGCCGAAAATCGATAATCTACATTGCTTATTGTGATCTGTTGAGATCTGAGGGTTATGAACTTTTAGTTATTAGATCTTTCAATTGCTGTGATGAGATTAATTATTGCAAATTTCTATTGTTTTGTTCTTGCATCTTGATACAATGAACGGAAATTAAAACGTCTGTGGGAAGGAATTTGAGCAATACATTTCGATGTTGAGAATGGAAATTTTGTTTTCACAGTCACTTATTTTATTGGTCAAATTATTCTGTTAGCCTATAATAGTGTCCGGGATGAATAAATATTTGTCTTCTTTCGGCGGTTGTTGTAGTTCAAGCCAGAAGAGGTTAATGCCATTATGAAGGATTTTGATGAGCCTGGATCCCTTGCCCCGACTGGGTTACACCTTGGTGGAGCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATTCGTGGAAAGAAGGTACATTTTGTGGCTCAATATCCTGACATGATTCTCTTTGATGTTGCGTTACGATTGATAATCGATCATCAATGTTTTTGATACTATTTTCTGGTTACTCTAATTCAGATAATCTATAGATCTGACGTTTAGGATTGGTTGTTCTTTGAATATGAAGATTATTAAATCAAAATGCACACTCTGCTCTTTTGGGCATTTCTTTTCCTTACGAGAGTATTGAATAAATTATTTTCTATGATCGAGAGAATAAACCTACAATTTGTGGGGCAAAATATTCTCTGCTTGCCACCAAGGAATGTGACAGATATTGGACTTATTAAACATGCATATTTGCACAGCCTCAAAGATTCATTGTTGTTTTTCCTATGATTCAAAATTTTTCTTGCTGAATTATTCAACAACTTTTCAATCTAAAGCAGTTCCTAGGAAATTTCCCACCATTCATGGTCTGTTCTATGAAATTTCCAATTATCACAATTCATACCGATCACTACAGTCAACTTATTAAACAAAAAATGAAGCAAATGAAATTCAACCCTCCTAGGAGTTGCAGTATGCCAGTACTGTGTTAATTTAATCTAATCTTTGATCTTATTTGATGATCCATTTGACAGGGCACTTCTGGGATCACTGTAAAGAAAACAACCCAGGCACTCATTTTTGGTTTATATGATGAACCTATGACTCCAGGACAATGCAACATGATCGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTG

mRNA sequence

ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGACGGCCAACATCTCAAAGCCGCTGCCATTGTCGGCAACGACGGTACTGTTTGGGCCCAGAGCGCCGACTTCCCCAAGTTCAAGCCAGAAGAGGTTAATGCCATTATGAAGGATTTTGATGAGCCTGGATCCCTTGCCCCGACTGGGTTACACCTTGGTGGAGCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATTCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAACCCAGGCACTCATTTTTGGTTTATATGATGAACCTATGACTCCAGGACAATGCAACATGATCGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTG

Coding sequence (CDS)

ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGACGGCCAACATCTCAAAGCCGCTGCCATTGTCGGCAACGACGGTACTGTTTGGGCCCAGAGCGCCGACTTCCCCAAGTTCAAGCCAGAAGAGGTTAATGCCATTATGAAGGATTTTGATGAGCCTGGATCCCTTGCCCCGACTGGGTTACACCTTGGTGGAGCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATTCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAACCCAGGCACTCATTTTTGGTTTATATGATGAACCTATGACTCCAGGACAATGCAACATGATCGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTG

Protein sequence

MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

Homology

[Close]

BLAST of MS013159 vs. NCBI nr
Match: XP_022153540.1 (profilin-like [Momordica charantia])

HSP 1 Score: 273.5 bits (698), Expect = 9.6e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. NCBI nr
Match: XP_008447563.1 (PREDICTED: profilin-like [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 121/131 (92.37%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. NCBI nr
Match: XP_004149180.1 (profilin [Cucumis sativus] >KGN58022.1 hypothetical protein Csa_009746 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 1.4e-65
Identity = 121/131 (92.37%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSAFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. NCBI nr
Match: XP_038880043.1 (profilin-like [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 121/131 (92.37%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of MS013159 vs. NCBI nr
Match: XP_022980486.1 (profilin-like [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 9.3e-65
Identity = 119/131 (90.84%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWAQS++FP++KPEE++AIMKDFDEPG+L
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of MS013159 vs. ExPASy Swiss-Prot
Match: Q941H7 (Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-61
Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQ+Y+DD LM E DGQHL AAAI+G+DG+VWAQSA+FP+FKP E+ AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG KYMVIQGE GAVIRGKKG  GITVKKTTQALI G+YDEPMTPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYL+DQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of MS013159 vs. ExPASy Swiss-Prot
Match: Q9XF38 (Profilin OS=Pyrus communis OX=23211 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-61
Identity = 105/131 (80.15%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQ+Y+DD LM ++DG HL AAAI+G+DG+VWAQS+ FPKFKPEE+ AIMKDFDEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG KYMVIQGE GAVIRGKKG+ G+TVKKT+QAL+FG+Y+EP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLIDQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. ExPASy Swiss-Prot
Match: Q9XF40 (Profilin-1 OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.1e-60
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQ+Y+DD+LM ++DG HL AAAI+G+DG+VWA S+ FPKFKPEE+ AIMKDFDEPGSL
Sbjct: 1   MSWQAYVDDRLMCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG KYMVIQGE GAVIRGKKG+ G+TVKKT QAL+FG+Y+EP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLIDQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. ExPASy Swiss-Prot
Match: A4KA41 (Profilin-5 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-60
Identity = 105/131 (80.15%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQ+Y+D+ LM E+DG HL AAAI+G+DG+VWAQS+ FP+FKPEE+ AI+KDFDEPGSL
Sbjct: 1   MSWQAYVDEHLMCEIDGHHLSAAAIIGHDGSVWAQSSTFPQFKPEEIAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG KYMVIQGESGAVIRGKKG  GITVKKT+QALIFG+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGIKYMVIQGESGAVIRGKKGAGGITVKKTSQALIFGIYDEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYL+ QGL
Sbjct: 121 RLGDYLLKQGL 131

[Close]

BLAST of MS013159 vs. ExPASy Swiss-Prot
Match: A4GFC2 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.5e-60
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQ+Y+DD LM +++GQHL AAA++G+DG+VWAQSA FP+FKPEEV AI+KDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGQHLTAAAVIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG KYMVIQGE GAVIRGKKG  GITVKKT QALIFG+YDEP+TPGQCN+IVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYL++QGL
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of MS013159 vs. ExPASy TrEMBL
Match: A0A6J1DH42 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021021 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.7e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. ExPASy TrEMBL
Match: A0A1S3BHQ2 (Profilin OS=Cucumis melo OX=3656 GN=LOC103489979 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.3e-66
Identity = 121/131 (92.37%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. ExPASy TrEMBL
Match: A0A0A0LBL9 (Profilin OS=Cucumis sativus OX=3659 GN=Csa_3G435030 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.0e-66
Identity = 121/131 (92.37%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSAFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of MS013159 vs. ExPASy TrEMBL
Match: A0A6J1ITQ4 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111479863 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-65
Identity = 119/131 (90.84%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWAQS++FP++KPEE++AIMKDFDEPG+L
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of MS013159 vs. ExPASy TrEMBL
Match: A0A6J1GUQ5 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111457625 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65
Identity = 119/131 (90.84%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWA+S++FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAKSSEFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of MS013159 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-54
Identity = 94/131 (71.76%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSY+DD LM +V+G HL AAAI+G DG+VWAQSA FP+ KP+E++ I KDF+EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGL LGG KYMVIQGE GAVIRGKKG  G+T+KKT QAL+FG YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLI+  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of MS013159 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 208.8 bits (530), Expect = 2.7e-54
Identity = 94/134 (70.15%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEV---DGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEP 60
           MSWQ+Y+D+ LM +V    G HL AAAI+G+DG+VWAQSA+FP+FKP+E+  IMKDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNM 120
           G LAPTG+ L G KYMVIQGE  AVIRGKKG  GIT+KKT Q+++FGLY+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIDQGL 132
           +VE+LGDYLI+QGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of MS013159 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-53
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQSY+DD LM EV+G HL  AAI G DG+VWAQS+ FP+ KP E+  I KDF+E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGL LGG KYMV+QGE+GAVIRGKKG  G+T+KKTTQAL+FG+YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLI+ GL
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of MS013159 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-53
Identity = 94/134 (70.15%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEV---DGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEP 60
           MSWQ+Y+D+ LM +V    G HL AAAIVG+DG+VWAQSA+FP+FK +E + IMKDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNM 120
           G LAPTGL + GAKYMVIQGE GAVIRGKKG  GIT+KKT Q+ +FG+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIDQGL 132
           +VE+LGDYL++QGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of MS013159 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 201.1 bits (510), Expect = 5.7e-52
Identity = 91/131 (69.47%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60
           MSWQ+Y+DD LM +V G  L AAAI+G DG+VWAQS +FP+ KPEE+  I  DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGL LGG KYMVIQGE  AVIRGKKG  G+T+KKTT AL+FG+YDEPMTPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 KLGDYLIDQGL 132
            LG+YLI+ GL
Sbjct: 158 NLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of MS013159 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153540.1	9.6e-70	100.00	profilin-like [Momordica charantia]	[more]
XP_008447563.1	1.1e-65	92.37	PREDICTED: profilin-like [Cucumis melo]	[more]
XP_004149180.1	1.4e-65	92.37	profilin [Cucumis sativus] >KGN58022.1 hypothetical protein Csa_009746 [Cucumis ...	[more]
XP_038880043.1	1.9e-65	92.37	profilin-like [Benincasa hispida]	[more]
XP_022980486.1	9.3e-65	90.84	profilin-like [Cucurbita maxima]	[more]

BLAST of MS013159 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941H7	1.0e-61	82.44	Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1	[more]
Q9XF38	1.7e-61	80.15	Profilin OS=Pyrus communis OX=23211 PE=1 SV=1	[more]
Q9XF40	1.1e-60	79.39	Profilin-1 OS=Malus domestica OX=3750 PE=1 SV=1	[more]
A4KA41	1.9e-60	80.15	Profilin-5 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
A4GFC2	5.5e-60	79.39	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of MS013159 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH42	4.7e-70	100.00	Profilin OS=Momordica charantia OX=3673 GN=LOC111021021 PE=3 SV=1	[more]
A0A1S3BHQ2	5.3e-66	92.37	Profilin OS=Cucumis melo OX=3656 GN=LOC103489979 PE=3 SV=1	[more]
A0A0A0LBL9	7.0e-66	92.37	Profilin OS=Cucumis sativus OX=3659 GN=Csa_3G435030 PE=3 SV=1	[more]
A0A6J1ITQ4	4.5e-65	90.84	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111479863 PE=3 SV=1	[more]
A0A6J1GUQ5	5.9e-65	90.84	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111457625 PE=3 SV=1	[more]

BLAST of MS013159 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19760.1	1.2e-54	71.76	profilin 1	[more]
AT2G19770.1	2.7e-54	70.15	profilin 5	[more]
AT4G29350.1	1.0e-53	70.99	profilin 2	[more]
AT4G29340.1	1.8e-53	70.15	profilin 4	[more]
AT5G56600.1	5.7e-52	69.47	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 71..80 score: 89.64 coord: 117..130 score: 77.01 coord: 1..14 score: 63.77 coord: 27..40 score: 73.9 coord: 104..117 score: 85.97 coord: 84..99 score: 73.52 coord: 52..66 score: 82.79
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 64..78 score: 70.0 coord: 113..130 score: 68.19 coord: 40..60 score: 55.71 coord: 21..30 score: 61.25 coord: 3..12 score: 59.75 coord: 100..113 score: 62.86
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 3.3E-60 score: 216.0
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 4.3E-43 score: 146.5
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 8.38514E-55 score: 165.962
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 2.7E-55 score: 188.0
None	No IPR available	PANTHER	PTHR11604:SF51	PROFILIN-A	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013159.1	MS013159.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003779	actin binding