MS013087 (gene) Bitter gourd (TR) v1

Overview


Name	MS013087
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor WIN1-like
Location	scaffold459: 112373 .. 113136 (+)
RNA-Seq Expression	MS013087
Synteny	MS013087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCAAAAGAAGTTCAGAGGAGTGAGGCAACGCCGGTGGGGCTCATGGGTCTCTGAGATTCGCCACCCTTTTTTGTATGTTTTTCCTCTCATCATCTCATCTTCTCTTTTATCTCTCTCACTAACCCTAAACAGTTTTCTTCTTCCTCTATTTTCAGAAAGAGGAGGGTCTGGCTAGGGACGTTCGAGACTGCCGAAGACGCGGCCAGAGCCTACGACGAGGCTGCCGTTCTGATGAGCGGTCGAACTGCCAAGACCAACTTTCCGTTGGCCGTGGCAGCCACCGACATTGTTAGAGGTAGAGCTAGAAATTTTCATAACAACATATATACATATATATATGTATTCTTTCCATTTTATGTACTAAAAAAATAATTGTCCTCTCCTTTCTTCTTAGCTCCAACTCTAGACACTACTATCTCAAGTGCGGTTTTGCCGCCGTTATCATCAATTCTCAACGCCAAACTTCGAAAGTTTTGCGAATCTTCGCCGCCTTCCCTAACTTGCCTCCGTCTCGACACCGCGAGTTGCCGCATCGGCGTCTGGCAGAGGCGTGCGGGACGTCGTCGAGTGGCCAAATCTAACTGGGTTATGATGGTTGAGCTTGAGAAGAAGAAGAACGACGACGGATTACGAGTGACGATGGAGTCGTCAGAGAAGGCCGGTGTGGAGGAGTTGAAACTATCAGGTGCCGGAGAGAGTTCAGATGATGAAGAAAGAGCTACTCTACAGATGATTGAAGAACTTCTGAATAAGATA

mRNA sequence

ATGGCGAAGCAAAAGAAGTTCAGAGGAGTGAGGCAACGCCGGTGGGGCTCATGGGTCTCTGAGATTCGCCACCCTTTTTTAAAGAGGAGGGTCTGGCTAGGGACGTTCGAGACTGCCGAAGACGCGGCCAGAGCCTACGACGAGGCTGCCGTTCTGATGAGCGGTCGAACTGCCAAGACCAACTTTCCGTTGGCCGTGGCAGCCACCGACATTGTTAGAGACACTACTATCTCAAGTGCGGTTTTGCCGCCGTTATCATCAATTCTCAACGCCAAACTTCGAAAGTTTTGCGAATCTTCGCCGCCTTCCCTAACTTGCCTCCGTCTCGACACCGCGAGTTGCCGCATCGGCGTCTGGCAGAGGCGTGCGGGACGTCGTCGAGTGGCCAAATCTAACTGGGTTATGATGGTTGAGCTTGAGAAGAAGAAGAACGACGACGGATTACGAGTGACGATGGAGTCGTCAGAGAAGGCCGGTGTGGAGGAGTTGAAACTATCAGGTGCCGGAGAGAGTTCAGATGATGAAGAAAGAGCTACTCTACAGATGATTGAAGAACTTCTGAATAAGATA

Coding sequence (CDS)

ATGGCGAAGCAAAAGAAGTTCAGAGGAGTGAGGCAACGCCGGTGGGGCTCATGGGTCTCTGAGATTCGCCACCCTTTTTTAAAGAGGAGGGTCTGGCTAGGGACGTTCGAGACTGCCGAAGACGCGGCCAGAGCCTACGACGAGGCTGCCGTTCTGATGAGCGGTCGAACTGCCAAGACCAACTTTCCGTTGGCCGTGGCAGCCACCGACATTGTTAGAGACACTACTATCTCAAGTGCGGTTTTGCCGCCGTTATCATCAATTCTCAACGCCAAACTTCGAAAGTTTTGCGAATCTTCGCCGCCTTCCCTAACTTGCCTCCGTCTCGACACCGCGAGTTGCCGCATCGGCGTCTGGCAGAGGCGTGCGGGACGTCGTCGAGTGGCCAAATCTAACTGGGTTATGATGGTTGAGCTTGAGAAGAAGAAGAACGACGACGGATTACGAGTGACGATGGAGTCGTCAGAGAAGGCCGGTGTGGAGGAGTTGAAACTATCAGGTGCCGGAGAGAGTTCAGATGATGAAGAAAGAGCTACTCTACAGATGATTGAAGAACTTCTGAATAAGATA

Protein sequence

MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFPLAVAATDIVRDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRIGVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEERATLQMIEELLNKI

Homology

[Close]

BLAST of MS013087 vs. NCBI nr
Match: XP_022153653.1 (ethylene-responsive transcription factor WIN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 354.4 bits (908), Expect = 6.2e-94
Identity = 187/194 (96.39%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPLAVAATDIVR----DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120
           NFPLAVAATDIVR    DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI
Sbjct: 61  NFPLAVAATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120

Query: 121 GVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEE 180
           GVWQR AGRRRVAKSNWVMMVELEKKKNDDGLRVTMESS+KAGVEELKLSGA ESSDDEE
Sbjct: 121 GVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDEE 180

Query: 181 RATLQMIEELLNKI 191
           RATLQMIEELLNKI
Sbjct: 181 RATLQMIEELLNKI 194

[Close]

BLAST of MS013087 vs. NCBI nr
Match: XP_022153654.1 (ethylene-responsive transcription factor WIN1-like isoform X2 [Momordica charantia])

HSP 1 Score: 332.0 bits (850), Expect = 3.3e-87
Identity = 180/194 (92.78%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSW S     F KRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWFSS-SSIFRKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPLAVAATDIVR----DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120
           NFPLAVAATDIVR    DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI
Sbjct: 61  NFPLAVAATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120

Query: 121 GVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEE 180
           GVWQR AGRRRVAKSNWVMMVELEKKKNDDGLRVTMESS+KAGVEELKLSGA ESSDDEE
Sbjct: 121 GVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDEE 180

Query: 181 RATLQMIEELLNKI 191
           RATLQMIEELLNKI
Sbjct: 181 RATLQMIEELLNKI 193

[Close]

BLAST of MS013087 vs. NCBI nr
Match: XP_004152351.1 (ethylene-responsive transcription factor WIN1 [Cucumis sativus] >KGN52887.1 hypothetical protein Csa_014569 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 4.1e-61
Identity = 135/192 (70.31%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHP LK+RVWLGTFETAEDAARAYDEAA+LMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKKRVWLGTFETAEDAARAYDEAAILMSGRTAK 60

Query: 61  TNFPLAVAATDIVRDTTISSAVLPPLSSILNAKLRK-FCESSPPSLTCLRLDTASCRIGV 120
           TNFPL+ A   +V + + + A    LS+ILN+KLRK +C+S PPSLTCLRLDT SC+IGV
Sbjct: 61  TNFPLSTA---VVTNESRNFAPFGSLSAILNSKLRKGYCKSLPPSLTCLRLDTKSCQIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVE-ELKLSGAGESSDDEER 180
           WQRR GR RV  SNW+MMV+L++KKNDD  RVT     + GVE E+++S    S D+EER
Sbjct: 121 WQRRTGRYRVVNSNWLMMVKLDEKKNDDEYRVTDHELLEKGVEDEVRVSNEAGSLDEEER 180

Query: 181 ATLQMIEELLNK 190
           A LQMIEELLNK
Sbjct: 181 AALQMIEELLNK 189

[Close]

BLAST of MS013087 vs. NCBI nr
Match: XP_038876460.1 (ethylene-responsive transcription factor WIN1-like [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 135/189 (71.43%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 3   KQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNF 62
           +Q KFRGVRQRRWGSWVSEIRHP LKRRVWLGTFETAEDAARAYDEAA+LMSGRTAKTNF
Sbjct: 4   QQNKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAILMSGRTAKTNF 63

Query: 63  PLAVAATDIVRDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRIGVWQRR 122
           P++ A   +VR    +     PLS+ILN KLRK  +S PPSLTCLRLDT SCRIGVWQR 
Sbjct: 64  PVSTA---MVRTEARNIPPFSPLSTILNTKLRKCWKSLPPSLTCLRLDTESCRIGVWQRH 123

Query: 123 AGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAG-ESSDDEERATLQ 182
            G  RV  S+WVMMVELE KKN+DG RVT ESSE    + ++L   G ES D+EERA LQ
Sbjct: 124 VGHCRVVDSSWVMMVELE-KKNNDGFRVTDESSENGVEDRVRLISDGTESLDEEERAALQ 183

Query: 183 MIEELLNKI 191
           MIEELLNKI
Sbjct: 184 MIEELLNKI 188

[Close]

BLAST of MS013087 vs. NCBI nr
Match: XP_008454492.1 (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo] >KAA0044439.1 ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa] >TYK29566.1 ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 137/196 (69.90%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHP LKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPLAVAATDIVRDTTISSAVLPPLSSILNAKLRK-FCESSPPSLTCLRLDTASCRIGV 120
           TNFPL   +T +VR+ + + +    LS+ILN+KLRK + +S PP LTCLRLDT +CRIGV
Sbjct: 61  TNFPL---STVMVRNESRNFSSFSSLSTILNSKLRKGYWKSLPPFLTCLRLDTENCRIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVE---ELKLSGAGESS-DD 180
           WQRR GR RV  SNW+MMVEL++KKNDDG +VT +   + GVE   ++++S  G  S D+
Sbjct: 121 WQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDDGAGSLDE 180

Query: 181 EERATLQMIEELLNKI 191
           EERA LQMIEELLNKI
Sbjct: 181 EERAALQMIEELLNKI 193

[Close]

BLAST of MS013087 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-49
Identity = 118/201 (58.71%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M + KKFRGVRQR WGSWV+EIRHP LKRR+WLGTFETAE+AARAYDEAAVLMSGR AKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPL--------AVAATDIVRDTTISSAV-LPPLSSILNAKLRKFCESSPPSLTCLRLDT 120
           NFPL        +   TDI   +T+SS+     LSSIL+AKLRK C+S  PSLTCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ASCRIGVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEK---AGVEELKLSGA 180
           AS  IGVWQ+RAG +  + S+WVM VEL    +      T ++S+    A   E+++ G+
Sbjct: 121 ASSHIGVWQKRAGSK--SDSSWVMTVELGPASSSQ--ETTSKASQDAILAPTTEVEIGGS 180

Query: 181 GES-SDDEERATLQMIEELLN 189
            E   D+EE+  LQMIEELLN
Sbjct: 181 REEVLDEEEKVALQMIEELLN 197

[Close]

BLAST of MS013087 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.5e-45
Identity = 104/192 (54.17%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   +KFRGVRQR+WGSWVSEIRHP LKRRVWLGTFETAE AARAYD+AA+LM+G+ AKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPLAVA--ATDIVRDTTISSAVLPP--LSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120
           NFP+  +   +D V+D  ++S ++ P  LS +LNAKLRK C+   PSLTCLRLDT S  I
Sbjct: 61  NFPVVKSEEGSDHVKD--VNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHI 120

Query: 121 GVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEE 180
           GVWQ+RAG +      WVM +EL    N+  + + + +  K  VE+ +       SD+++
Sbjct: 121 GVWQKRAGSK--TSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQ 180

Query: 181 RATLQMIEELLN 189
            A ++MIEELLN
Sbjct: 181 LA-MEMIEELLN 187

[Close]

BLAST of MS013087 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-43
Identity = 103/190 (54.21%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   KKFRGVRQR+WGSWVSEIRHP LKRRVWLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPLAVAATDIVRDTTISSAVLPP--LSSILNAKLRKFCESSPPSLTCLRLDTASCRIGV 120
           NFP  V  ++      I+SA+  P  LS +LNAKLRK C+   P LTCLRLD  S  IGV
Sbjct: 61  NFP--VIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEERA 180
           WQ+RAG +     NWV +VEL  K N         +     +E  K+    E   ++++ 
Sbjct: 121 WQKRAGSK--TSPNWVKLVELGDKVN---------ARPGGDIETNKMKVRNEDVQEDDQM 177

Query: 181 TLQMIEELLN 189
            +QMIEELLN
Sbjct: 181 AMQMIEELLN 177

[Close]

BLAST of MS013087 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.6e-21
Identity = 78/185 (42.16%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 4   QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFP 63
           Q++FRGVRQR WGSWVSEIRHP LK R+WLGTFETAEDAARAYDEAA LM G  A+TNFP
Sbjct: 5   QQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64

Query: 64  LAVAATDIVRDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRIGVWQRRA 123
                        I ++    LS+ L AKL K   +S       +  T        Q + 
Sbjct: 65  --------YNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQT--------QTQT 124

Query: 124 GRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEERATLQMI 183
            R + A S+ V   E    +   G+  T E   + G   ++ +      D  E    QMI
Sbjct: 125 ARSQSADSDGVTANESHLNR---GVTETTEIKWEDGNANMQQNFRPLEEDHIE----QMI 166

Query: 184 EELLN 189
           EELL+
Sbjct: 185 EELLH 166

[Close]

BLAST of MS013087 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 52/99 (52.53%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFP 63
           Q+++RG RQR WGSWVSEIRH  LK R+W GTFE+AEDAARAYDEAA LM G  A+TNFP
Sbjct: 5   QQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFP 64

Query: 64  LAVAATDIVRDTTISSAVLPPLSSILNAKLRKFCESSPP 103
               A+       +S+ ++  L     A L+    SS P
Sbjct: 65  YNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLP 103

[Close]

BLAST of MS013087 vs. ExPASy TrEMBL
Match: A0A6J1DI23 (ethylene-responsive transcription factor WIN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021107 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 187/194 (96.39%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPLAVAATDIVR----DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120
           NFPLAVAATDIVR    DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI
Sbjct: 61  NFPLAVAATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120

Query: 121 GVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEE 180
           GVWQR AGRRRVAKSNWVMMVELEKKKNDDGLRVTMESS+KAGVEELKLSGA ESSDDEE
Sbjct: 121 GVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDEE 180

Query: 181 RATLQMIEELLNKI 191
           RATLQMIEELLNKI
Sbjct: 181 RATLQMIEELLNKI 194

[Close]

BLAST of MS013087 vs. ExPASy TrEMBL
Match: A0A6J1DJQ0 (ethylene-responsive transcription factor WIN1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021107 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.6e-87
Identity = 180/194 (92.78%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           MAKQKKFRGVRQRRWGSW S     F KRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWFSS-SSIFRKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPLAVAATDIVR----DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120
           NFPLAVAATDIVR    DTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI
Sbjct: 61  NFPLAVAATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120

Query: 121 GVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEE 180
           GVWQR AGRRRVAKSNWVMMVELEKKKNDDGLRVTMESS+KAGVEELKLSGA ESSDDEE
Sbjct: 121 GVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDEE 180

Query: 181 RATLQMIEELLNKI 191
           RATLQMIEELLNKI
Sbjct: 181 RATLQMIEELLNKI 193

[Close]

BLAST of MS013087 vs. ExPASy TrEMBL
Match: A0A0A0KWT0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004960 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.0e-61
Identity = 135/192 (70.31%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHP LK+RVWLGTFETAEDAARAYDEAA+LMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKKRVWLGTFETAEDAARAYDEAAILMSGRTAK 60

Query: 61  TNFPLAVAATDIVRDTTISSAVLPPLSSILNAKLRK-FCESSPPSLTCLRLDTASCRIGV 120
           TNFPL+ A   +V + + + A    LS+ILN+KLRK +C+S PPSLTCLRLDT SC+IGV
Sbjct: 61  TNFPLSTA---VVTNESRNFAPFGSLSAILNSKLRKGYCKSLPPSLTCLRLDTKSCQIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVE-ELKLSGAGESSDDEER 180
           WQRR GR RV  SNW+MMV+L++KKNDD  RVT     + GVE E+++S    S D+EER
Sbjct: 121 WQRRTGRYRVVNSNWLMMVKLDEKKNDDEYRVTDHELLEKGVEDEVRVSNEAGSLDEEER 180

Query: 181 ATLQMIEELLNK 190
           A LQMIEELLNK
Sbjct: 181 AALQMIEELLNK 189

[Close]

BLAST of MS013087 vs. ExPASy TrEMBL
Match: A0A5A7TT91 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001720 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 137/196 (69.90%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHP LKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPLAVAATDIVRDTTISSAVLPPLSSILNAKLRK-FCESSPPSLTCLRLDTASCRIGV 120
           TNFPL   +T +VR+ + + +    LS+ILN+KLRK + +S PP LTCLRLDT +CRIGV
Sbjct: 61  TNFPL---STVMVRNESRNFSSFSSLSTILNSKLRKGYWKSLPPFLTCLRLDTENCRIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVE---ELKLSGAGESS-DD 180
           WQRR GR RV  SNW+MMVEL++KKNDDG +VT +   + GVE   ++++S  G  S D+
Sbjct: 121 WQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDDGAGSLDE 180

Query: 181 EERATLQMIEELLNKI 191
           EERA LQMIEELLNKI
Sbjct: 181 EERAALQMIEELLNKI 193

[Close]

BLAST of MS013087 vs. ExPASy TrEMBL
Match: A0A1S3BYV0 (ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LOC103494890 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 137/196 (69.90%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MAK-QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60
           MAK QKKFRGVRQRRWGSWVSEIRHP LKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPLAVAATDIVRDTTISSAVLPPLSSILNAKLRK-FCESSPPSLTCLRLDTASCRIGV 120
           TNFPL   +T +VR+ + + +    LS+ILN+KLRK + +S PP LTCLRLDT +CRIGV
Sbjct: 61  TNFPL---STVMVRNESRNFSSFSSLSTILNSKLRKGYWKSLPPFLTCLRLDTENCRIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVE---ELKLSGAGESS-DD 180
           WQRR GR RV  SNW+MMVEL++KKNDDG +VT +   + GVE   ++++S  G  S D+
Sbjct: 121 WQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDDGAGSLDE 180

Query: 181 EERATLQMIEELLNKI 191
           EERA LQMIEELLNKI
Sbjct: 181 EERAALQMIEELLNKI 193

[Close]

BLAST of MS013087 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 9.1e-51
Identity = 118/201 (58.71%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M + KKFRGVRQR WGSWV+EIRHP LKRR+WLGTFETAE+AARAYDEAAVLMSGR AKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPL--------AVAATDIVRDTTISSAV-LPPLSSILNAKLRKFCESSPPSLTCLRLDT 120
           NFPL        +   TDI   +T+SS+     LSSIL+AKLRK C+S  PSLTCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ASCRIGVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEK---AGVEELKLSGA 180
           AS  IGVWQ+RAG +  + S+WVM VEL    +      T ++S+    A   E+++ G+
Sbjct: 121 ASSHIGVWQKRAGSK--SDSSWVMTVELGPASSSQ--ETTSKASQDAILAPTTEVEIGGS 180

Query: 181 GES-SDDEERATLQMIEELLN 189
            E   D+EE+  LQMIEELLN
Sbjct: 181 REEVLDEEEKVALQMIEELLN 197

[Close]

BLAST of MS013087 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 6.7e-46
Identity = 104/192 (54.17%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   +KFRGVRQR+WGSWVSEIRHP LKRRVWLGTFETAE AARAYD+AA+LM+G+ AKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPLAVA--ATDIVRDTTISSAVLPP--LSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120
           NFP+  +   +D V+D  ++S ++ P  LS +LNAKLRK C+   PSLTCLRLDT S  I
Sbjct: 61  NFPVVKSEEGSDHVKD--VNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHI 120

Query: 121 GVWQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEE 180
           GVWQ+RAG +      WVM +EL    N+  + + + +  K  VE+ +       SD+++
Sbjct: 121 GVWQKRAGSK--TSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQ 180

Query: 181 RATLQMIEELLN 189
            A ++MIEELLN
Sbjct: 181 LA-MEMIEELLN 187

[Close]

BLAST of MS013087 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44
Identity = 103/190 (54.21%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   KKFRGVRQR+WGSWVSEIRHP LKRRVWLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPLAVAATDIVRDTTISSAVLPP--LSSILNAKLRKFCESSPPSLTCLRLDTASCRIGV 120
           NFP  V  ++      I+SA+  P  LS +LNAKLRK C+   P LTCLRLD  S  IGV
Sbjct: 61  NFP--VIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEERA 180
           WQ+RAG +     NWV +VEL  K N         +     +E  K+    E   ++++ 
Sbjct: 121 WQKRAGSK--TSPNWVKLVELGDKVN---------ARPGGDIETNKMKVRNEDVQEDDQM 177

Query: 181 TLQMIEELLN 189
            +QMIEELLN
Sbjct: 181 AMQMIEELLN 177

[Close]

BLAST of MS013087 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-41
Identity = 100/190 (52.63%), Postives = 123/190 (64.74%), Query Frame = 0


Query: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60
           M   KKFRGVRQR+WGSWVSEIRHP L   VWLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPLAVAATDIVRDTTISSAVLPP--LSSILNAKLRKFCESSPPSLTCLRLDTASCRIGV 120
           NFP  V  ++      I+SA+  P  LS +LNAKLRK C+   P LTCLRLD  S  IGV
Sbjct: 61  NFP--VIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQRRAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEERA 180
           WQ+RAG +     NWV +VEL  K N         +     +E  K+    E   ++++ 
Sbjct: 121 WQKRAGSK--TSPNWVKLVELGDKVN---------ARPGGDIETNKMKVRNEDVQEDDQM 174

Query: 181 TLQMIEELLN 189
            +QMIEELLN
Sbjct: 181 AMQMIEELLN 174

[Close]

BLAST of MS013087 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.0e-22
Identity = 78/185 (42.16%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 4   QKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTNFP 63
           Q++FRGVRQR WGSWVSEIRHP LK R+WLGTFETAEDAARAYDEAA LM G  A+TNFP
Sbjct: 5   QQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64

Query: 64  LAVAATDIVRDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRIGVWQRRA 123
                        I ++    LS+ L AKL K   +S       +  T        Q + 
Sbjct: 65  --------YNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQT--------QTQT 124

Query: 124 GRRRVAKSNWVMMVELEKKKNDDGLRVTMESSEKAGVEELKLSGAGESSDDEERATLQMI 183
            R + A S+ V   E    +   G+  T E   + G   ++ +      D  E    QMI
Sbjct: 125 ARSQSADSDGVTANESHLNR---GVTETTEIKWEDGNANMQQNFRPLEEDHIE----QMI 166

Query: 184 EELLN 189
           EELL+
Sbjct: 185 EELLH 166

The following BLAST results are available for this feature:

BLAST of MS013087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153653.1	6.2e-94	96.39	ethylene-responsive transcription factor WIN1-like isoform X1 [Momordica charant...	[more]
XP_022153654.1	3.3e-87	92.78	ethylene-responsive transcription factor WIN1-like isoform X2 [Momordica charant...	[more]
XP_004152351.1	4.1e-61	70.31	ethylene-responsive transcription factor WIN1 [Cucumis sativus] >KGN52887.1 hypo...	[more]
XP_038876460.1	1.2e-60	71.43	ethylene-responsive transcription factor WIN1-like [Benincasa hispida]	[more]
XP_008454492.1	2.6e-60	69.90	PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo] >KA...	[more]

BLAST of MS013087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	1.3e-49	58.71	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	9.5e-45	54.17	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	1.8e-43	54.21	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q94AW5	5.6e-21	42.16	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.4e-19	52.53	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of MS013087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DI23	3.0e-94	96.39	ethylene-responsive transcription factor WIN1-like isoform X1 OS=Momordica chara...	[more]
A0A6J1DJQ0	1.6e-87	92.78	ethylene-responsive transcription factor WIN1-like isoform X2 OS=Momordica chara...	[more]
A0A0A0KWT0	2.0e-61	70.31	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004960 PE=...	[more]
A0A5A7TT91	1.3e-60	69.90	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BYV0	1.3e-60	69.90	ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of MS013087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	9.1e-51	58.71	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	6.7e-46	54.17	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	1.3e-44	54.21	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	2.2e-41	52.63	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	4.0e-22	42.16	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 29..45 score: 71.02 coord: 7..18 score: 61.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..69 e-value: 5.0E-36 score: 135.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 6..50 e-value: 2.7E-12 score: 46.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..63 score: 21.733072
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 5..63 e-value: 5.57275E-32 score: 108.128
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..65 e-value: 8.0E-27 score: 95.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..177
None	No IPR available	PANTHER	PTHR31194:SF134	ETHYLENE RESPONSE FACTOR	coord: 1..189
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..189
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013087.1	MS013087.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity